RNA–Protein interactions for RNA: ENST00000622702.1

PDLIM2-221, Transcript of PDZ and LIM domain 2, humanhuman

TSL 5 BASIC

Gene PDLIM2, Length 1,490 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-221ENST00000622702 NGBQ9NPG2 151 aa17.23■□□□□ 0.35
PDLIM2-221ENST00000622702 ERVK13-1Q9NX77 482 aa17.23■□□□□ 0.35
PDLIM2-221ENST00000622702 EXOSC1Q9Y3B2 195 aaKnown RBP17.23■□□□□ 0.35
PDLIM2-221ENST00000622702 ABCA12Q86UK0 2595 aa17.22■□□□□ 0.35
PDLIM2-221ENST00000622702 TRIM64A6NGJ6 449 aa17.22■□□□□ 0.35
PDLIM2-221ENST00000622702 PRR32B1ATL7 298 aa17.22■□□□□ 0.35
PDLIM2-221ENST00000622702 C21orf33P30042 268 aaPredicted RBP17.22■□□□□ 0.35
PDLIM2-221ENST00000622702 OPRL1P41146 370 aa17.22■□□□□ 0.35
PDLIM2-221ENST00000622702 IDH3GP51553 393 aaPredicted RBP17.22■□□□□ 0.35
PDLIM2-221ENST00000622702 GALEQ14376 348 aa17.22■□□□□ 0.35
PDLIM2-221ENST00000622702 KCTD21Q4G0X4 260 aa17.22■□□□□ 0.35
PDLIM2-221ENST00000622702 ZNF684Q5T5D7 378 aa17.22■□□□□ 0.35
PDLIM2-221ENST00000622702 RNLSQ5VYX0 342 aa17.22■□□□□ 0.35
PDLIM2-221ENST00000622702 WFDC8Q8IUA0 241 aa17.22■□□□□ 0.35
PDLIM2-221ENST00000622702 SGCDQ92629 289 aa17.22■□□□□ 0.35
PDLIM2-221ENST00000622702 ZC3HAV1LQ96H79 300 aaKnown RBP17.22■□□□□ 0.35
PDLIM2-221ENST00000622702 MS4A3Q96HJ5 214 aa17.22■□□□□ 0.35
PDLIM2-221ENST00000622702 OR8B4Q96RC9 309 aa17.22■□□□□ 0.35
PDLIM2-221ENST00000622702 MYCBPQ99417 103 aaPredicted RBP17.22■□□□□ 0.35
PDLIM2-221ENST00000622702 ATF6BQ99941 703 aa17.22■□□□□ 0.35
PDLIM2-221ENST00000622702 C1QTNF6Q9BXI9 259 aa17.22■□□□□ 0.35
PDLIM2-221ENST00000622702 CASKO14936 926 aa17.21■□□□□ 0.35
PDLIM2-221ENST00000622702 CELA3BP08861 270 aa17.21■□□□□ 0.35
PDLIM2-221ENST00000622702 LIMS3P0CW19 117 aa17.21■□□□□ 0.35
PDLIM2-221ENST00000622702 LIMS4P0CW20 117 aa17.21■□□□□ 0.35
PDLIM2-221ENST00000622702 MYL12AP19105 171 aa17.21■□□□□ 0.35
PDLIM2-221ENST00000622702 CRYGSP22914 178 aa17.21■□□□□ 0.35
PDLIM2-221ENST00000622702 APEX1P27695 318 aaKnown RBP17.21■□□□□ 0.35
PDLIM2-221ENST00000622702 HTR5AP47898 357 aa17.21■□□□□ 0.35
PDLIM2-221ENST00000622702 ZNF83P51522 516 aa17.21■□□□□ 0.35
PDLIM2-221ENST00000622702 KRTAP27-1Q3LI81 207 aa17.21■□□□□ 0.35
PDLIM2-221ENST00000622702 EGFL6Q8IUX8 553 aa17.21■□□□□ 0.35
PDLIM2-221ENST00000622702 ZNF679Q8IYX0 411 aa17.21■□□□□ 0.35
PDLIM2-221ENST00000622702 MRPL48Q96GC5 212 aaKnown RBP17.21■□□□□ 0.35
PDLIM2-221ENST00000622702 NR1H4Q96RI1 486 aaPredicted RBP17.21■□□□□ 0.35
PDLIM2-221ENST00000622702 CENPMQ9NSP4 180 aa17.21■□□□□ 0.35
PDLIM2-221ENST00000622702 CADP27708 2225 aa17.21■□□□□ 0.35
PDLIM2-221ENST00000622702 IGHV1-18A0A0C4DH31 117 aa17.2■□□□□ 0.34
PDLIM2-221ENST00000622702 RGS10O43665 173 aa17.2■□□□□ 0.34
PDLIM2-221ENST00000622702 MRPS14O60783 128 aaKnown RBP17.2■□□□□ 0.34
PDLIM2-221ENST00000622702 ZNF254O75437 659 aa17.2■□□□□ 0.34
PDLIM2-221ENST00000622702 SULT1C4O75897 302 aa17.2■□□□□ 0.34
PDLIM2-221ENST00000622702 CECR9P0C854 216 aa17.2■□□□□ 0.34
PDLIM2-221ENST00000622702 STOMP27105 288 aa17.2■□□□□ 0.34
PDLIM2-221ENST00000622702 OTX1P32242 354 aaPredicted RBP17.2■□□□□ 0.34
PDLIM2-221ENST00000622702 GRB2P62993 217 aaKnown RBP17.2■□□□□ 0.34
PDLIM2-221ENST00000622702 DAZAP2Q15038 168 aaPredicted RBP17.2■□□□□ 0.34
PDLIM2-221ENST00000622702 CDONQ4KMG0 1287 aa17.2■□□□□ 0.34
PDLIM2-221ENST00000622702 ALKBH2Q6NS38 261 aa17.2■□□□□ 0.34
PDLIM2-221ENST00000622702 LRRN1Q6UXK5 716 aa17.2■□□□□ 0.34
PDLIM2-221ENST00000622702 PRSS48Q7RTY5 328 aa17.2■□□□□ 0.34
PDLIM2-221ENST00000622702 KRT77Q7Z794 578 aa17.2■□□□□ 0.34
PDLIM2-221ENST00000622702 LHFPL3Q86UP9 236 aa17.2■□□□□ 0.34
PDLIM2-221ENST00000622702 MYPOPQ86VE0 399 aaPredicted RBP17.2■□□□□ 0.34
PDLIM2-221ENST00000622702 SLC30A7Q8NEW0 376 aa17.2■□□□□ 0.34
PDLIM2-221ENST00000622702 IL17RDQ8NFM7 739 aa17.2■□□□□ 0.34
PDLIM2-221ENST00000622702 POM121L2Q96KW2 1035 aa17.2■□□□□ 0.34
PDLIM2-221ENST00000622702 ALG8Q9BVK2 526 aa17.2■□□□□ 0.34
PDLIM2-221ENST00000622702 CDCA4Q9BXL8 241 aa17.2■□□□□ 0.34
PDLIM2-221ENST00000622702 MROQ9BYG7 248 aa17.2■□□□□ 0.34
PDLIM2-221ENST00000622702 CHCHD3Q9NX63 227 aaKnown RBP17.2■□□□□ 0.34
PDLIM2-221ENST00000622702 SLCO1C1Q9NYB5 712 aa17.2■□□□□ 0.34
PDLIM2-221ENST00000622702 ERVK-18Q9QC07 812 aa17.2■□□□□ 0.34
PDLIM2-221ENST00000622702 HRNRQ86YZ3 2850 aaPredicted RBP17.2■□□□□ 0.34
PDLIM2-221ENST00000622702 LOC100509620A0A075B734 347 aa17.19■□□□□ 0.34
PDLIM2-221ENST00000622702 A6NNC1 897 aa17.19■□□□□ 0.34
PDLIM2-221ENST00000622702 TNFAIP8O95379 198 aa17.19■□□□□ 0.34
PDLIM2-221ENST00000622702 HTR1AP08908 422 aa17.19■□□□□ 0.34
PDLIM2-221ENST00000622702 H2BFMP0C1H6 154 aa17.19■□□□□ 0.34
PDLIM2-221ENST00000622702 EEF1B2P24534 225 aaKnown RBP17.19■□□□□ 0.34
PDLIM2-221ENST00000622702 APLNRP35414 380 aa17.19■□□□□ 0.34
PDLIM2-221ENST00000622702 ETV1P50549 477 aa17.19■□□□□ 0.34
PDLIM2-221ENST00000622702 ACTA2P62736 377 aa17.19■□□□□ 0.34
PDLIM2-221ENST00000622702 ACTG2P63267 376 aa17.19■□□□□ 0.34
PDLIM2-221ENST00000622702 RSPO1Q2MKA7 263 aaPredicted RBP17.19■□□□□ 0.34
PDLIM2-221ENST00000622702 PLEKHG7Q6ZR37 379 aa17.19■□□□□ 0.34
PDLIM2-221ENST00000622702 SPATC1Q76KD6 591 aa17.19■□□□□ 0.34
PDLIM2-221ENST00000622702 KCTD20Q7Z5Y7 419 aa17.19■□□□□ 0.34
PDLIM2-221ENST00000622702 SYS1Q8N2H4 156 aa17.19■□□□□ 0.34
PDLIM2-221ENST00000622702 SNX33Q8WV41 574 aa17.19■□□□□ 0.34
PDLIM2-221ENST00000622702 KCNJ15Q99712 375 aa17.19■□□□□ 0.34
PDLIM2-221ENST00000622702 TTTY10Q9BZA0 68 aa17.19■□□□□ 0.34
PDLIM2-221ENST00000622702 NIPAL2Q9H841 368 aa17.19■□□□□ 0.34
PDLIM2-221ENST00000622702 MRM2Q9UI43 246 aaKnown RBP17.19■□□□□ 0.34
PDLIM2-221ENST00000622702 IKZF2Q9UKS7 526 aa17.19■□□□□ 0.34
PDLIM2-221ENST00000622702 M0R1B8 84 aa17.18■□□□□ 0.34
PDLIM2-221ENST00000622702 PSMD9O00233 223 aa17.18■□□□□ 0.34
PDLIM2-221ENST00000622702 ABHD16AO95870 558 aa17.18■□□□□ 0.34
PDLIM2-221ENST00000622702 KRT8P05787 483 aa17.18■□□□□ 0.34
PDLIM2-221ENST00000622702 PTAFRP25105 342 aa17.18■□□□□ 0.34
PDLIM2-221ENST00000622702 DCTDP32321 178 aa17.18■□□□□ 0.34
PDLIM2-221ENST00000622702 GDI2P50395 445 aaKnown RBP17.18■□□□□ 0.34
PDLIM2-221ENST00000622702 IRF3Q14653 427 aa17.18■□□□□ 0.34
PDLIM2-221ENST00000622702 TAF13Q15543 124 aa17.18■□□□□ 0.34
PDLIM2-221ENST00000622702 TBC1D28Q2M2D7 210 aa17.18■□□□□ 0.34
PDLIM2-221ENST00000622702 TMEM108Q6UXF1 575 aa17.18■□□□□ 0.34
PDLIM2-221ENST00000622702 TMEM200AQ86VY9 491 aa17.18■□□□□ 0.34
PDLIM2-221ENST00000622702 OR1J2Q8NGS2 313 aa17.18■□□□□ 0.34
PDLIM2-221ENST00000622702 SPTSSAQ969W0 71 aa17.18■□□□□ 0.34
PDLIM2-221ENST00000622702 ELOVL3Q9HB03 270 aa17.18■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms