RNA–Protein interactions for RNA: ENST00000621131.4

VPS29-212, Transcript of VPS29, retromer complex component, humanhuman

TSL 3 BASIC

Gene VPS29, Length 1,124 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29-212ENST00000621131 NXPH2O95156 264 aa4.11□□□□□ -1.75
VPS29-212ENST00000621131 IGHEP01854 428 aa4.11□□□□□ -1.75
VPS29-212ENST00000621131 GNAO1P09471 354 aa4.11□□□□□ -1.75
VPS29-212ENST00000621131 CT62P0C5K7 136 aa4.11□□□□□ -1.75
VPS29-212ENST00000621131 CCDC159P0C7I6 412 aa4.11□□□□□ -1.75
VPS29-212ENST00000621131 GIMD1P0DJR0 217 aa4.11□□□□□ -1.75
VPS29-212ENST00000621131 IGHV4-31P0DP07 118 aa4.11□□□□□ -1.75
VPS29-212ENST00000621131 RPS4Y1P22090 263 aaKnown RBP4.11□□□□□ -1.75
VPS29-212ENST00000621131 ACP1P24666 158 aa4.11□□□□□ -1.75
VPS29-212ENST00000621131 GGT2P36268 569 aa4.11□□□□□ -1.75
VPS29-212ENST00000621131 PPICP45877 212 aa4.11□□□□□ -1.75
VPS29-212ENST00000621131 SLC6A8P48029 635 aa4.11□□□□□ -1.75
VPS29-212ENST00000621131 IDH2P48735 452 aaKnown RBP4.11□□□□□ -1.75
VPS29-212ENST00000621131 TMED10P49755 219 aaKnown RBP4.11□□□□□ -1.75
VPS29-212ENST00000621131 EMDP50402 254 aa4.11□□□□□ -1.75
VPS29-212ENST00000621131 HLCSP50747 726 aa4.11□□□□□ -1.75
VPS29-212ENST00000621131 SMSP52788 366 aa4.11□□□□□ -1.75
VPS29-212ENST00000621131 CRYBA2P53672 197 aa4.11□□□□□ -1.75
VPS29-212ENST00000621131 CRISP1P54107 249 aa4.11□□□□□ -1.75
VPS29-212ENST00000621131 CXCR4P61073 352 aa4.11□□□□□ -1.75
VPS29-212ENST00000621131 RPP38P78345 283 aaKnown RBP4.11□□□□□ -1.75
VPS29-212ENST00000621131 PLCXD2Q0VAA5 305 aa4.11□□□□□ -1.75
VPS29-212ENST00000621131 FUT7Q11130 342 aa4.11□□□□□ -1.75
VPS29-212ENST00000621131 AIMP2Q13155 320 aaKnown RBP4.11□□□□□ -1.75
VPS29-212ENST00000621131 MAPK11Q15759 364 aa4.11□□□□□ -1.75
VPS29-212ENST00000621131 TMEM44Q2T9K0 475 aa4.11□□□□□ -1.75
VPS29-212ENST00000621131 CCNJQ5T5M9 372 aa4.11□□□□□ -1.75
VPS29-212ENST00000621131 MRPL2Q5T653 305 aaKnown RBP4.11□□□□□ -1.75
VPS29-212ENST00000621131 TCEAL6Q6IPX3 200 aa4.11□□□□□ -1.75
VPS29-212ENST00000621131 ZNF773Q6PK81 442 aa4.11□□□□□ -1.75
VPS29-212ENST00000621131 PAQR6Q6TCH4 344 aa4.11□□□□□ -1.75
VPS29-212ENST00000621131 FIP1L1Q6UN15 594 aaKnown RBP4.11□□□□□ -1.75
VPS29-212ENST00000621131 ZNF836Q6ZNA1 936 aa4.11□□□□□ -1.75
VPS29-212ENST00000621131 ARHGAP22Q7Z5H3 698 aa4.11□□□□□ -1.75
VPS29-212ENST00000621131 TMEM179BQ7Z7N9 219 aa4.11□□□□□ -1.75
VPS29-212ENST00000621131 VRK2Q86Y07 508 aa4.11□□□□□ -1.75
VPS29-212ENST00000621131 CDC20BQ86Y33 519 aa4.11□□□□□ -1.75
VPS29-212ENST00000621131 HS3ST5Q8IZT8 346 aa4.11□□□□□ -1.75
VPS29-212ENST00000621131 SLC34A3Q8N130 599 aa4.11□□□□□ -1.75
VPS29-212ENST00000621131 TMCO5AQ8N6Q1 288 aa4.11□□□□□ -1.75
VPS29-212ENST00000621131 ZNF540Q8NDQ6 660 aa4.11□□□□□ -1.75
VPS29-212ENST00000621131 PLPP5Q8NEB5 264 aa4.11□□□□□ -1.75
VPS29-212ENST00000621131 GPR32P1Q8NGA4 272 aa4.11□□□□□ -1.75
VPS29-212ENST00000621131 OR4K5Q8NGD3 323 aa4.11□□□□□ -1.75
VPS29-212ENST00000621131 OR9Q2Q8NGE9 314 aa4.11□□□□□ -1.75
VPS29-212ENST00000621131 OR52L1Q8NGH7 329 aa4.11□□□□□ -1.75
VPS29-212ENST00000621131 OR5L2Q8NGL0 311 aa4.11□□□□□ -1.75
VPS29-212ENST00000621131 ACOT11Q8WXI4 607 aaPredicted RBP4.11□□□□□ -1.75
VPS29-212ENST00000621131 PIK3R3Q92569 461 aa4.11□□□□□ -1.75
VPS29-212ENST00000621131 FCGR1BQ92637 280 aa4.11□□□□□ -1.75
VPS29-212ENST00000621131 OSTF1Q92882 214 aa4.11□□□□□ -1.75
VPS29-212ENST00000621131 TCEAL3Q969E4 200 aa4.11□□□□□ -1.75
VPS29-212ENST00000621131 SLC41A3Q96GZ6 507 aa4.11□□□□□ -1.75
VPS29-212ENST00000621131 MPP4Q96JB8 637 aa4.11□□□□□ -1.75
VPS29-212ENST00000621131 SLC38A2Q96QD8 506 aa4.11□□□□□ -1.75
VPS29-212ENST00000621131 GAL3ST4Q96RP7 486 aa4.11□□□□□ -1.75
VPS29-212ENST00000621131 CCNL2Q96S94 520 aaPredicted RBP4.11□□□□□ -1.75
VPS29-212ENST00000621131 LPAR4Q99677 370 aa4.11□□□□□ -1.75
VPS29-212ENST00000621131 PITX2Q99697 317 aa4.11□□□□□ -1.75
VPS29-212ENST00000621131 OR8D2Q9GZM6 311 aa4.11□□□□□ -1.75
VPS29-212ENST00000621131 CCDC90BQ9GZT6 254 aa4.11□□□□□ -1.75
VPS29-212ENST00000621131 DPAGT1Q9H3H5 408 aa4.11□□□□□ -1.75
VPS29-212ENST00000621131 ANKRA2Q9H9E1 313 aa4.11□□□□□ -1.75
VPS29-212ENST00000621131 ACER3Q9NUN7 267 aa4.11□□□□□ -1.75
VPS29-212ENST00000621131 VNN3Q9NY84 501 aa4.11□□□□□ -1.75
VPS29-212ENST00000621131 MAGED1Q9Y5V3 778 aaPredicted RBP4.11□□□□□ -1.75
VPS29-212ENST00000621131 KCNE3Q9Y6H6 103 aa4.11□□□□□ -1.75
VPS29-212ENST00000621131 USP9YO00507 2555 aaPredicted RBP4.11□□□□□ -1.75
VPS29-212ENST00000621131 DOPEY2Q9Y3R5 2298 aa4.11□□□□□ -1.75
VPS29-212ENST00000621131 IGKV3D-11A0A0A0MRZ8 115 aa4.1□□□□□ -1.75
VPS29-212ENST00000621131 HTR3EA5X5Y0 456 aa4.1□□□□□ -1.75
VPS29-212ENST00000621131 EFCAB10A6NFE3 127 aa4.1□□□□□ -1.75
VPS29-212ENST00000621131 SAGE2PA6NJ88 616 aa4.1□□□□□ -1.75
VPS29-212ENST00000621131 EPM2AB3EWF7 344 aa4.1□□□□□ -1.75
VPS29-212ENST00000621131 SLC1A7O00341 560 aa4.1□□□□□ -1.75
VPS29-212ENST00000621131 DLGAP1O14490 977 aa4.1□□□□□ -1.75
VPS29-212ENST00000621131 SOCS3O14543 225 aa4.1□□□□□ -1.75
VPS29-212ENST00000621131 XRCC3O43542 346 aa4.1□□□□□ -1.75
VPS29-212ENST00000621131 FCMRO60667 390 aa4.1□□□□□ -1.75
VPS29-212ENST00000621131 TPST2O60704 377 aa4.1□□□□□ -1.75
VPS29-212ENST00000621131 DNAJB6O75190 326 aa4.1□□□□□ -1.75
VPS29-212ENST00000621131 REM1O75628 298 aa4.1□□□□□ -1.75
VPS29-212ENST00000621131 CLIC3O95833 236 aa4.1□□□□□ -1.75
VPS29-212ENST00000621131 WDPCPO95876 746 aa4.1□□□□□ -1.75
VPS29-212ENST00000621131 CSTAP01040 98 aa4.1□□□□□ -1.75
VPS29-212ENST00000621131 SMIM18P0DKX4 95 aa4.1□□□□□ -1.75
VPS29-212ENST00000621131 POU2F1P14859 743 aa4.1□□□□□ -1.75
VPS29-212ENST00000621131 DRD5P21918 477 aa4.1□□□□□ -1.75
VPS29-212ENST00000621131 CRHBPP24387 322 aa4.1□□□□□ -1.75
VPS29-212ENST00000621131 ELK4P28324 431 aa4.1□□□□□ -1.75
VPS29-212ENST00000621131 RBM34P42696 430 aaKnown RBP4.1□□□□□ -1.75
VPS29-212ENST00000621131 EMP2P54851 167 aa4.1□□□□□ -1.75
VPS29-212ENST00000621131 CD47Q08722 323 aa4.1□□□□□ -1.75
VPS29-212ENST00000621131 TSPAN31Q12999 210 aa4.1□□□□□ -1.75
VPS29-212ENST00000621131 ILKQ13418 452 aa4.1□□□□□ -1.75
VPS29-212ENST00000621131 RAPSNQ13702 412 aa4.1□□□□□ -1.75
VPS29-212ENST00000621131 APOFQ13790 326 aa4.1□□□□□ -1.75
VPS29-212ENST00000621131 MAD2L1BPQ15013 274 aaPredicted RBP4.1□□□□□ -1.75
VPS29-212ENST00000621131 OR1Q1Q15612 314 aa4.1□□□□□ -1.75
VPS29-212ENST00000621131 NPTX1Q15818 432 aa4.1□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 103.4 ms