RNA–Protein interactions for RNA: ENST00000614488.4

SCAMP1-205, Transcript of secretory carrier membrane protein 1, humanhuman

TSL 1 (best)

Gene SCAMP1, Length 1,276 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP1-205ENST00000614488 SLC25A11Q02978 314 aaKnown RBP2.25□□□□□ -2.05
SCAMP1-205ENST00000614488 HSP90B2PQ58FF3 399 aa2.25□□□□□ -2.05
SCAMP1-205ENST00000614488 PRAMEF20Q5VT98 475 aa2.25□□□□□ -2.05
SCAMP1-205ENST00000614488 AADACL4Q5VUY2 407 aa2.25□□□□□ -2.05
SCAMP1-205ENST00000614488 SPINT4Q6UDR6 99 aa2.25□□□□□ -2.05
SCAMP1-205ENST00000614488 SNX20Q7Z614 316 aa2.25□□□□□ -2.05
SCAMP1-205ENST00000614488 DRAXINQ8NBI3 349 aaPredicted RBP2.25□□□□□ -2.05
SCAMP1-205ENST00000614488 OR2L3Q8NG85 312 aa2.25□□□□□ -2.05
SCAMP1-205ENST00000614488 GPR151Q8TDV0 419 aa2.25□□□□□ -2.05
SCAMP1-205ENST00000614488 TPD52L3Q96J77 140 aa2.25□□□□□ -2.05
SCAMP1-205ENST00000614488 ZNHIT6Q9NWK9 470 aaKnown RBP2.25□□□□□ -2.05
SCAMP1-205ENST00000614488 HYPKQ9NX55 129 aa2.25□□□□□ -2.05
SCAMP1-205ENST00000614488 RAB20Q9NX57 234 aa2.25□□□□□ -2.05
SCAMP1-205ENST00000614488 NUP50Q9UKX7 468 aa2.25□□□□□ -2.05
SCAMP1-205ENST00000614488 SDK2Q58EX2 2172 aa2.25□□□□□ -2.05
SCAMP1-205ENST00000614488 H0Y8G0 127 aa2.24□□□□□ -2.05
SCAMP1-205ENST00000614488 FOXE1O00358 373 aaPredicted RBP2.24□□□□□ -2.05
SCAMP1-205ENST00000614488 FLOT1O75955 427 aa2.24□□□□□ -2.05
SCAMP1-205ENST00000614488 CLPXO76031 633 aa2.24□□□□□ -2.05
SCAMP1-205ENST00000614488 MX1P20591 662 aa2.24□□□□□ -2.05
SCAMP1-205ENST00000614488 CCT6AP40227 531 aaKnown RBP2.24□□□□□ -2.05
SCAMP1-205ENST00000614488 CCNHP51946 323 aaPredicted RBP2.24□□□□□ -2.05
SCAMP1-205ENST00000614488 RPL23AP62750 156 aaKnown RBP2.24□□□□□ -2.05
SCAMP1-205ENST00000614488 CRADDP78560 199 aa2.24□□□□□ -2.05
SCAMP1-205ENST00000614488 IDI1Q13907 227 aa2.24□□□□□ -2.05
SCAMP1-205ENST00000614488 QPRTQ15274 297 aa2.24□□□□□ -2.05
SCAMP1-205ENST00000614488 TAF9Q16594 264 aa2.24□□□□□ -2.05
SCAMP1-205ENST00000614488 METAP1DQ6UB28 335 aaPredicted RBP2.24□□□□□ -2.05
SCAMP1-205ENST00000614488 FAM228AQ86W67 206 aa2.24□□□□□ -2.05
SCAMP1-205ENST00000614488 SPANXA2-OT1Q8N9U9 137 aa2.24□□□□□ -2.05
SCAMP1-205ENST00000614488 FAM184AQ8NB25 1140 aa2.24□□□□□ -2.05
SCAMP1-205ENST00000614488 APCDD1LQ8NCL9 501 aa2.24□□□□□ -2.05
SCAMP1-205ENST00000614488 OR2A1Q8NGT9 310 aa2.24□□□□□ -2.05
SCAMP1-205ENST00000614488 PEX13Q92968 403 aa2.24□□□□□ -2.05
SCAMP1-205ENST00000614488 PLIN2Q99541 437 aa2.24□□□□□ -2.05
SCAMP1-205ENST00000614488 FRMD8P1Q9BZ68 369 aaPredicted RBP2.24□□□□□ -2.05
SCAMP1-205ENST00000614488 PLA2G12AQ9BZM1 189 aa2.24□□□□□ -2.05
SCAMP1-205ENST00000614488 FAM192AQ9GZU8 254 aa2.24□□□□□ -2.05
SCAMP1-205ENST00000614488 FANCEQ9HB96 536 aa2.24□□□□□ -2.05
SCAMP1-205ENST00000614488 TRMT112Q9UI30 125 aaKnown RBP2.24□□□□□ -2.05
SCAMP1-205ENST00000614488 LSM7Q9UK45 103 aaKnown RBP2.24□□□□□ -2.05
SCAMP1-205ENST00000614488 VANGL2Q9ULK5 521 aa2.24□□□□□ -2.05
SCAMP1-205ENST00000614488 CARHSP1Q9Y2V2 147 aaKnown RBP2.24□□□□□ -2.05
SCAMP1-205ENST00000614488 SEC16AO15027 2179 aa2.24□□□□□ -2.05
SCAMP1-205ENST00000614488 NID2Q14112 1375 aa2.23□□□□□ -2.05
SCAMP1-205ENST00000614488 IGHV3OR16-8A0A075B7F1 116 aa2.23□□□□□ -2.05
SCAMP1-205ENST00000614488 GLYATL1P3A0A0U1RQE8 302 aa2.23□□□□□ -2.05
SCAMP1-205ENST00000614488 ARHGEF35A5YM69 484 aa2.23□□□□□ -2.05
SCAMP1-205ENST00000614488 DNASE2O00115 360 aaPredicted RBP2.23□□□□□ -2.05
SCAMP1-205ENST00000614488 CASC3O15234 703 aaKnown RBP2.23□□□□□ -2.05
SCAMP1-205ENST00000614488 CHST10O43529 356 aa2.23□□□□□ -2.05
SCAMP1-205ENST00000614488 REM1O75628 298 aa2.23□□□□□ -2.05
SCAMP1-205ENST00000614488 S100A9P06702 114 aaKnown RBP2.23□□□□□ -2.05
SCAMP1-205ENST00000614488 STAG3L3P0CL85 134 aa2.23□□□□□ -2.05
SCAMP1-205ENST00000614488 NCF2P19878 526 aaPredicted RBP2.23□□□□□ -2.05
SCAMP1-205ENST00000614488 RAB3AP20336 220 aa2.23□□□□□ -2.05
SCAMP1-205ENST00000614488 TPMTP51580 245 aa2.23□□□□□ -2.05
SCAMP1-205ENST00000614488 PRMT2P55345 433 aa2.23□□□□□ -2.05
SCAMP1-205ENST00000614488 CARD18P57730 90 aa2.23□□□□□ -2.05
SCAMP1-205ENST00000614488 EIF3EP60228 445 aaKnown RBP2.23□□□□□ -2.05
SCAMP1-205ENST00000614488 TGM3Q08188 693 aa2.23□□□□□ -2.05
SCAMP1-205ENST00000614488 BST2Q10589 180 aaKnown RBP2.23□□□□□ -2.05
SCAMP1-205ENST00000614488 SRSF5Q13243 272 aaKnown RBP2.23□□□□□ -2.05
SCAMP1-205ENST00000614488 DOC2AQ14183 400 aa2.23□□□□□ -2.05
SCAMP1-205ENST00000614488 NANOGNBQ7Z5D8 188 aa2.23□□□□□ -2.05
SCAMP1-205ENST00000614488 NT5C3BQ969T7 300 aa2.23□□□□□ -2.05
SCAMP1-205ENST00000614488 SLC7A5P2Q9GIP4 190 aa2.23□□□□□ -2.05
SCAMP1-205ENST00000614488 SUN2Q9UH99 717 aa2.23□□□□□ -2.05
SCAMP1-205ENST00000614488 CBY1Q9Y3M2 126 aa2.23□□□□□ -2.05
SCAMP1-205ENST00000614488 TMEM94Q12767 1356 aa2.23□□□□□ -2.05
SCAMP1-205ENST00000614488 MROH5Q6ZUA9 1318 aa2.22□□□□□ -2.05
SCAMP1-205ENST00000614488 A0A075B6Q4 140 aa2.22□□□□□ -2.05
SCAMP1-205ENST00000614488 IGKV2-24A0A0C4DH68 120 aa2.22□□□□□ -2.05
SCAMP1-205ENST00000614488 POLR3GO15318 223 aaPredicted RBP2.22□□□□□ -2.05
SCAMP1-205ENST00000614488 CLIC3O95833 236 aa2.22□□□□□ -2.05
SCAMP1-205ENST00000614488 NPPAP01160 153 aa2.22□□□□□ -2.05
SCAMP1-205ENST00000614488 ZNF250P15622 560 aa2.22□□□□□ -2.05
SCAMP1-205ENST00000614488 ZNF43P17038 809 aa2.22□□□□□ -2.05
SCAMP1-205ENST00000614488 CD9P21926 228 aa2.22□□□□□ -2.05
SCAMP1-205ENST00000614488 GPX4P36969 197 aaPredicted RBP2.22□□□□□ -2.05
SCAMP1-205ENST00000614488 HCAR3P49019 387 aa2.22□□□□□ -2.05
SCAMP1-205ENST00000614488 ATP5IP56385 69 aaPredicted RBP2.22□□□□□ -2.05
SCAMP1-205ENST00000614488 VSX2P58304 361 aaPredicted RBP2.22□□□□□ -2.05
SCAMP1-205ENST00000614488 ADARB1P78563 741 aaKnown RBP2.22□□□□□ -2.05
SCAMP1-205ENST00000614488 WDR43Q15061 677 aaKnown RBP eCLIP2.22□□□□□ -2.05
SCAMP1-205ENST00000614488 MPV17L2Q567V2 206 aa2.22□□□□□ -2.05
SCAMP1-205ENST00000614488 ARMC12Q5T9G4 340 aa2.22□□□□□ -2.05
SCAMP1-205ENST00000614488 TMCO2Q7Z6W1 182 aaPredicted RBP2.22□□□□□ -2.05
SCAMP1-205ENST00000614488 OFCC1Q8IZS5 231 aa2.22□□□□□ -2.05
SCAMP1-205ENST00000614488 TMEM105Q8N8V8 129 aa2.22□□□□□ -2.05
SCAMP1-205ENST00000614488 MNS1Q8NEH6 495 aa2.22□□□□□ -2.05
SCAMP1-205ENST00000614488 SPATA4Q8NEY3 305 aa2.22□□□□□ -2.05
SCAMP1-205ENST00000614488 HSD17B10Q99714 261 aaKnown RBP2.22□□□□□ -2.05
SCAMP1-205ENST00000614488 SIKE1Q9BRV8 207 aa2.22□□□□□ -2.05
SCAMP1-205ENST00000614488 STMN4Q9H169 189 aaPredicted RBP2.22□□□□□ -2.05
SCAMP1-205ENST00000614488 SLC38A10Q9HBR0 1119 aa2.22□□□□□ -2.05
SCAMP1-205ENST00000614488 EXOSC4Q9NPD3 245 aaKnown RBP2.22□□□□□ -2.05
SCAMP1-205ENST00000614488 FBN1P35555 2871 aaKnown RBP2.22□□□□□ -2.05
SCAMP1-205ENST00000614488 TNIKQ9UKE5 1360 aa2.22□□□□□ -2.05
SCAMP1-205ENST00000614488 IGLV1-36A0A0B4J1U3 117 aa2.21□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 65.4 ms