RNA–Protein interactions for RNA: ENST00000588419.1

HDAC5-208, Transcript of histone deacetylase 5, humanhuman

TSL 2

Gene HDAC5, Length 742 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC5-208ENST00000588419 CCDC92Q53HC0 331 aaPredicted RBP11.51□□□□□ -0.57
HDAC5-208ENST00000588419 SHISA2Q6UWI4 295 aa11.51□□□□□ -0.57
HDAC5-208ENST00000588419 BTNL3Q6UXE8 466 aa11.51□□□□□ -0.57
HDAC5-208ENST00000588419 FAM122BQ7Z309 247 aa11.51□□□□□ -0.57
HDAC5-208ENST00000588419 MOGAT3Q86VF5 341 aa11.51□□□□□ -0.57
HDAC5-208ENST00000588419 GLB1L2Q8IW92 636 aa11.51□□□□□ -0.57
HDAC5-208ENST00000588419 RNF113BQ8IZP6 322 aaKnown RBP11.51□□□□□ -0.57
HDAC5-208ENST00000588419 OR52E2Q8NGJ4 325 aa11.51□□□□□ -0.57
HDAC5-208ENST00000588419 PTP4A1Q93096 173 aa11.51□□□□□ -0.57
HDAC5-208ENST00000588419 HAVCR1Q96D42 359 aa11.51□□□□□ -0.57
HDAC5-208ENST00000588419 RSRC1Q96IZ7 334 aaKnown RBP11.51□□□□□ -0.57
HDAC5-208ENST00000588419 MEGF10Q96KG7 1140 aa11.51□□□□□ -0.57
HDAC5-208ENST00000588419 C1orf147Q96MC9 270 aaPredicted RBP11.51□□□□□ -0.57
HDAC5-208ENST00000588419 WACQ9BTA9 647 aa11.51□□□□□ -0.57
HDAC5-208ENST00000588419 ZNF747Q9BV97 191 aa11.51□□□□□ -0.57
HDAC5-208ENST00000588419 VIPAS39Q9H9C1 493 aa11.51□□□□□ -0.57
HDAC5-208ENST00000588419 GCM1Q9NP62 436 aa11.51□□□□□ -0.57
HDAC5-208ENST00000588419 TNFRSF19Q9NS68 423 aa11.51□□□□□ -0.57
HDAC5-208ENST00000588419 AURKCQ9UQB9 309 aa11.51□□□□□ -0.57
HDAC5-208ENST00000588419 TMEM5Q9Y2B1 443 aa11.51□□□□□ -0.57
HDAC5-208ENST00000588419 LRCH1Q9Y2L9 728 aa11.51□□□□□ -0.57
HDAC5-208ENST00000588419 IER3IP1Q9Y5U9 82 aa11.51□□□□□ -0.57
HDAC5-208ENST00000588419 SOX21Q9Y651 276 aaPredicted RBP11.51□□□□□ -0.57
HDAC5-208ENST00000588419 A8MXK9 166 aa11.5□□□□□ -0.57
HDAC5-208ENST00000588419 F5H5P2 479 aa11.5□□□□□ -0.57
HDAC5-208ENST00000588419 NME4O00746 187 aa11.5□□□□□ -0.57
HDAC5-208ENST00000588419 SELEP16581 610 aa11.5□□□□□ -0.57
HDAC5-208ENST00000588419 SRP9P49458 86 aaKnown RBP11.5□□□□□ -0.57
HDAC5-208ENST00000588419 FAM201AQ5SY85 155 aa11.5□□□□□ -0.57
HDAC5-208ENST00000588419 CORO6Q6QEF8 472 aa11.5□□□□□ -0.57
HDAC5-208ENST00000588419 TMPRSS11FQ6ZWK6 438 aa11.5□□□□□ -0.57
HDAC5-208ENST00000588419 CBLL1Q75N03 491 aa11.5□□□□□ -0.57
HDAC5-208ENST00000588419 KLBQ86Z14 1044 aa11.5□□□□□ -0.57
HDAC5-208ENST00000588419 SLC15A3Q8IY34 581 aa11.5□□□□□ -0.57
HDAC5-208ENST00000588419 OR5L1Q8NGL2 311 aa11.5□□□□□ -0.57
HDAC5-208ENST00000588419 SLC25A28Q96A46 364 aa11.5□□□□□ -0.57
HDAC5-208ENST00000588419 ZNF582Q96NG8 517 aaPredicted RBP11.5□□□□□ -0.57
HDAC5-208ENST00000588419 NUAK2Q9H093 628 aa11.5□□□□□ -0.57
HDAC5-208ENST00000588419 ZMAT3Q9HA38 289 aaKnown RBP11.5□□□□□ -0.57
HDAC5-208ENST00000588419 RPS6KA6Q9UK32 745 aa11.5□□□□□ -0.57
HDAC5-208ENST00000588419 V9GYQ6 96 aa11.5□□□□□ -0.57
HDAC5-208ENST00000588419 OR6C6A6NF89 314 aa11.49□□□□□ -0.57
HDAC5-208ENST00000588419 SASH3O75995 380 aa11.49□□□□□ -0.57
HDAC5-208ENST00000588419 DIRAS1O95057 198 aa11.49□□□□□ -0.57
HDAC5-208ENST00000588419 PPP1R3DO95685 299 aa11.49□□□□□ -0.57
HDAC5-208ENST00000588419 HLA-DPB1P04440 258 aa11.49□□□□□ -0.57
HDAC5-208ENST00000588419 H1F0P07305 194 aaKnown RBP11.49□□□□□ -0.57
HDAC5-208ENST00000588419 RAC2P15153 192 aa11.49□□□□□ -0.57
HDAC5-208ENST00000588419 TUBG1P23258 451 aa11.49□□□□□ -0.57
HDAC5-208ENST00000588419 OMGP23515 440 aa11.49□□□□□ -0.57
HDAC5-208ENST00000588419 CD80P33681 288 aa11.49□□□□□ -0.57
HDAC5-208ENST00000588419 RGS6P49758 472 aa11.49□□□□□ -0.57
HDAC5-208ENST00000588419 GSK3BP49841 420 aa11.49□□□□□ -0.57
HDAC5-208ENST00000588419 NUDT2P50583 147 aa11.49□□□□□ -0.57
HDAC5-208ENST00000588419 RPS6KA3P51812 740 aa11.49□□□□□ -0.57
HDAC5-208ENST00000588419 DBPQ10586 325 aaPredicted RBP11.49□□□□□ -0.57
HDAC5-208ENST00000588419 SLC27A4Q6P1M0 643 aa11.49□□□□□ -0.57
HDAC5-208ENST00000588419 PTCHD4Q6ZW05 846 aa11.49□□□□□ -0.57
HDAC5-208ENST00000588419 SPATC1Q76KD6 591 aa11.49□□□□□ -0.57
HDAC5-208ENST00000588419 LINC00346Q8IVM7 164 aa11.49□□□□□ -0.57
HDAC5-208ENST00000588419 C19orf18Q8NEA5 215 aa11.49□□□□□ -0.57
HDAC5-208ENST00000588419 OR8G5Q8NG78 346 aa11.49□□□□□ -0.57
HDAC5-208ENST00000588419 OR8B3Q8NGG8 313 aa11.49□□□□□ -0.57
HDAC5-208ENST00000588419 OR52J3Q8NH60 311 aa11.49□□□□□ -0.57
HDAC5-208ENST00000588419 SLC7A13Q8TCU3 470 aa11.49□□□□□ -0.57
HDAC5-208ENST00000588419 TSSK2Q96PF2 358 aa11.49□□□□□ -0.57
HDAC5-208ENST00000588419 OR8B2Q96RD0 313 aa11.49□□□□□ -0.57
HDAC5-208ENST00000588419 KCTD14Q9BQ13 255 aaPredicted RBP11.49□□□□□ -0.57
HDAC5-208ENST00000588419 NMNAT1Q9HAN9 279 aaPredicted RBP11.49□□□□□ -0.57
HDAC5-208ENST00000588419 TUBG2Q9NRH3 451 aa11.49□□□□□ -0.57
HDAC5-208ENST00000588419 SIGLEC7Q9Y286 467 aa11.49□□□□□ -0.57
HDAC5-208ENST00000588419 AP3M1Q9Y2T2 418 aa11.49□□□□□ -0.57
HDAC5-208ENST00000588419 FAM32AQ9Y421 112 aaKnown RBP11.49□□□□□ -0.57
HDAC5-208ENST00000588419 IGHV2-70DA0A0C4DH43 119 aa11.48□□□□□ -0.57
HDAC5-208ENST00000588419 UNC119BA6NIH7 251 aa11.48□□□□□ -0.57
HDAC5-208ENST00000588419 LRRC30A6NM36 301 aa11.48□□□□□ -0.57
HDAC5-208ENST00000588419 MLNRO43193 412 aa11.48□□□□□ -0.57
HDAC5-208ENST00000588419 AHCYL1O43865 530 aa11.48□□□□□ -0.57
HDAC5-208ENST00000588419 RNASE1P07998 156 aaKnown RBP11.48□□□□□ -0.57
HDAC5-208ENST00000588419 COX4I1P13073 169 aa11.48□□□□□ -0.57
HDAC5-208ENST00000588419 IRF2P14316 349 aa11.48□□□□□ -0.57
HDAC5-208ENST00000588419 MTNR1AP48039 350 aa11.48□□□□□ -0.57
HDAC5-208ENST00000588419 LSM6P62312 80 aaKnown RBP11.48□□□□□ -0.57
HDAC5-208ENST00000588419 PRR31Q5SQ13 230 aa11.48□□□□□ -0.57
HDAC5-208ENST00000588419 GPR139Q6DWJ6 353 aa11.48□□□□□ -0.57
HDAC5-208ENST00000588419 LEG1Q6P5S2 330 aa11.48□□□□□ -0.57
HDAC5-208ENST00000588419 DNM1P34Q6PK57 102 aa11.48□□□□□ -0.57
HDAC5-208ENST00000588419 LRRN1Q6UXK5 716 aa11.48□□□□□ -0.57
HDAC5-208ENST00000588419 BRD3OSQ6XYD6 125 aa11.48□□□□□ -0.57
HDAC5-208ENST00000588419 NLRC3Q7RTR2 1065 aa11.48□□□□□ -0.57
HDAC5-208ENST00000588419 ADCK1Q86TW2 530 aa11.48□□□□□ -0.57
HDAC5-208ENST00000588419 OR13G1Q8NGZ3 307 aa11.48□□□□□ -0.57
HDAC5-208ENST00000588419 RP9Q8TA86 221 aaKnown RBP11.48□□□□□ -0.57
HDAC5-208ENST00000588419 FANK1Q8TC84 345 aa11.48□□□□□ -0.57
HDAC5-208ENST00000588419 APOBEC3DQ96AK3 386 aaPredicted RBP11.48□□□□□ -0.57
HDAC5-208ENST00000588419 NEIL1Q96FI4 390 aaPredicted RBP11.48□□□□□ -0.57
HDAC5-208ENST00000588419 PLEKHA8Q96JA3 519 aa11.48□□□□□ -0.57
HDAC5-208ENST00000588419 ERMAPQ96PL5 475 aaPredicted RBP11.48□□□□□ -0.57
HDAC5-208ENST00000588419 TMEM246Q9BRR3 403 aa11.48□□□□□ -0.57
HDAC5-208ENST00000588419 HDHD2Q9H0R4 259 aa11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms