RNA–Protein interactions for RNA: ENST00000566082.1

USB1-212, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2

Gene USB1, Length 3,888 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-212ENST00000566082 PIN1P1O15428 100 aa9.52□□□□□ -0.89
USB1-212ENST00000566082 ZNF354AO60765 605 aaPredicted RBP9.52□□□□□ -0.89
USB1-212ENST00000566082 ALOX12BO75342 701 aa9.52□□□□□ -0.89
USB1-212ENST00000566082 OR13C7P0DN81 318 aa9.52□□□□□ -0.89
USB1-212ENST00000566082 IGFBP4P22692 258 aa9.52□□□□□ -0.89
USB1-212ENST00000566082 C1orf140Q5VVS0 124 aa9.52□□□□□ -0.89
USB1-212ENST00000566082 KCNG3Q8TAE7 436 aa9.52□□□□□ -0.89
USB1-212ENST00000566082 WNT2BQ93097 391 aa9.52□□□□□ -0.89
USB1-212ENST00000566082 OR8B4Q96RC9 309 aa9.52□□□□□ -0.89
USB1-212ENST00000566082 RBM24Q9BX46 236 aaKnown RBP9.52□□□□□ -0.89
USB1-212ENST00000566082 SPACA1Q9HBV2 294 aa9.52□□□□□ -0.89
USB1-212ENST00000566082 MMP25Q9NPA2 562 aa9.52□□□□□ -0.89
USB1-212ENST00000566082 EXOSC3Q9NQT5 275 aaKnown RBP9.52□□□□□ -0.89
USB1-212ENST00000566082 A0A0G2JK05 382 aa9.52□□□□□ -0.89
USB1-212ENST00000566082 ZNF16P17020 682 aaPredicted RBP9.52□□□□□ -0.89
USB1-212ENST00000566082 CD96P40200 585 aa9.52□□□□□ -0.89
USB1-212ENST00000566082 RABIFP47224 123 aa9.52□□□□□ -0.89
USB1-212ENST00000566082 BIDP55957 195 aa9.52□□□□□ -0.89
USB1-212ENST00000566082 GPR85P60893 370 aa9.52□□□□□ -0.89
USB1-212ENST00000566082 MPPED2Q15777 294 aa9.52□□□□□ -0.89
USB1-212ENST00000566082 OVCH2Q7RTZ1 564 aa9.52□□□□□ -0.89
USB1-212ENST00000566082 GKN2Q86XP6 184 aa9.52□□□□□ -0.89
USB1-212ENST00000566082 OR56B1Q8NGI3 324 aa9.52□□□□□ -0.89
USB1-212ENST00000566082 OR5M8Q8NGP6 311 aa9.52□□□□□ -0.89
USB1-212ENST00000566082 OTOSQ8NHW6 89 aa9.52□□□□□ -0.89
USB1-212ENST00000566082 TPSD1Q9BZJ3 242 aa9.52□□□□□ -0.89
USB1-212ENST00000566082 SLC19A3Q9BZV2 496 aa9.52□□□□□ -0.89
USB1-212ENST00000566082 PTGES2Q9H7Z7 377 aa9.52□□□□□ -0.89
USB1-212ENST00000566082 ZNF223Q9UK11 482 aaPredicted RBP9.52□□□□□ -0.89
USB1-212ENST00000566082 SLC17A4Q9Y2C5 497 aa9.52□□□□□ -0.89
USB1-212ENST00000566082 FBXO7Q9Y3I1 522 aa9.52□□□□□ -0.89
USB1-212ENST00000566082 URGCP-MRPS24S4R325 110 aa9.52□□□□□ -0.89
USB1-212ENST00000566082 TSC2P49815 1807 aa9.51□□□□□ -0.89
USB1-212ENST00000566082 FAM230AA0A1W2PPH8 454 aa9.51□□□□□ -0.89
USB1-212ENST00000566082 CPED1A4D0V7 1026 aa9.51□□□□□ -0.89
USB1-212ENST00000566082 PRSS37A4D1T9 235 aa9.51□□□□□ -0.89
USB1-212ENST00000566082 DCTN6O00399 190 aa9.51□□□□□ -0.89
USB1-212ENST00000566082 LRP3O75074 770 aa9.51□□□□□ -0.89
USB1-212ENST00000566082 HEXBP07686 556 aa9.51□□□□□ -0.89
USB1-212ENST00000566082 ZNF44P15621 663 aa9.51□□□□□ -0.89
USB1-212ENST00000566082 EIF2S3LQ2VIR3 472 aaKnown RBP9.51□□□□□ -0.89
USB1-212ENST00000566082 SOHLH1Q5JUK2 328 aa9.51□□□□□ -0.89
USB1-212ENST00000566082 SLC16A13Q7RTY0 426 aa9.51□□□□□ -0.89
USB1-212ENST00000566082 TSTD1Q8NFU3 115 aa9.51□□□□□ -0.89
USB1-212ENST00000566082 RLN3Q8WXF3 142 aa9.51□□□□□ -0.89
USB1-212ENST00000566082 FN3KRPQ9HA64 309 aa9.51□□□□□ -0.89
USB1-212ENST00000566082 SLC22A11Q9NSA0 550 aa9.51□□□□□ -0.89
USB1-212ENST00000566082 PIAS3Q9Y6X2 628 aa9.51□□□□□ -0.89
USB1-212ENST00000566082 POLR2HP52434 150 aaKnown RBP9.51□□□□□ -0.89
USB1-212ENST00000566082 GAS1P54826 345 aa9.51□□□□□ -0.89
USB1-212ENST00000566082 NKX6-1P78426 367 aaPredicted RBP9.51□□□□□ -0.89
USB1-212ENST00000566082 S100A12P80511 92 aa9.51□□□□□ -0.89
USB1-212ENST00000566082 ATPAF1Q5TC12 328 aaPredicted RBP9.51□□□□□ -0.89
USB1-212ENST00000566082 GPR157Q5UAW9 335 aa9.51□□□□□ -0.89
USB1-212ENST00000566082 OR13H1Q8NG92 308 aa9.51□□□□□ -0.89
USB1-212ENST00000566082 NT5CQ8TCD5 201 aa9.51□□□□□ -0.89
USB1-212ENST00000566082 DDIT4LQ96D03 193 aa9.51□□□□□ -0.89
USB1-212ENST00000566082 AKR1E2Q96JD6 320 aa9.51□□□□□ -0.89
USB1-212ENST00000566082 BMFQ96LC9 184 aa9.51□□□□□ -0.89
USB1-212ENST00000566082 SYT3Q9BQG1 590 aa9.51□□□□□ -0.89
USB1-212ENST00000566082 TMPRSS13Q9BYE2 586 aa9.51□□□□□ -0.89
USB1-212ENST00000566082 MED29Q9NX70 200 aa9.51□□□□□ -0.89
USB1-212ENST00000566082 C4orf47A7E2U8 309 aa9.51□□□□□ -0.89
USB1-212ENST00000566082 A8MVM7 634 aa9.51□□□□□ -0.89
USB1-212ENST00000566082 HRKO00198 91 aa9.51□□□□□ -0.89
USB1-212ENST00000566082 PTP4A3O75365 173 aa9.51□□□□□ -0.89
USB1-212ENST00000566082 TBX6O95947 436 aaPredicted RBP9.51□□□□□ -0.89
USB1-212ENST00000566082 DEFA6Q01524 100 aa9.51□□□□□ -0.89
USB1-212ENST00000566082 CLINT1Q14677 625 aa9.51□□□□□ -0.89
USB1-212ENST00000566082 OR52N5Q8NH56 324 aa9.51□□□□□ -0.89
USB1-212ENST00000566082 OR51E1Q8TCB6 317 aa9.51□□□□□ -0.89
USB1-212ENST00000566082 KISS1RQ969F8 398 aaPredicted RBP9.51□□□□□ -0.89
USB1-212ENST00000566082 LRRC3BQ96PB8 259 aa9.51□□□□□ -0.89
USB1-212ENST00000566082 UNKLQ9H9P5 680 aaKnown RBP9.51□□□□□ -0.89
USB1-212ENST00000566082 RAB19A4D1S5 217 aa9.5□□□□□ -0.89
USB1-212ENST00000566082 OR4C45A6NMZ5 311 aa9.5□□□□□ -0.89
USB1-212ENST00000566082 EML2O95834 649 aa9.5□□□□□ -0.89
USB1-212ENST00000566082 KCNJ3P48549 501 aa9.5□□□□□ -0.89
USB1-212ENST00000566082 TAS2R46P59540 309 aa9.5□□□□□ -0.89
USB1-212ENST00000566082 PSG6Q00889 435 aa9.5□□□□□ -0.89
USB1-212ENST00000566082 EMC4Q5J8M3 183 aa9.5□□□□□ -0.89
USB1-212ENST00000566082 AKR1C8PQ5T2L2 129 aa9.5□□□□□ -0.89
USB1-212ENST00000566082 ATRAIDQ6UW56 229 aa9.5□□□□□ -0.89
USB1-212ENST00000566082 FBXW12Q6X9E4 464 aa9.5□□□□□ -0.89
USB1-212ENST00000566082 TMEM52Q8NDY8 209 aa9.5□□□□□ -0.89
USB1-212ENST00000566082 SNIP1Q8TAD8 396 aaKnown RBP9.5□□□□□ -0.89
USB1-212ENST00000566082 NUDT9Q9BW91 350 aa9.5□□□□□ -0.89
USB1-212ENST00000566082 CHRDQ9H2X0 955 aa9.5□□□□□ -0.89
USB1-212ENST00000566082 SEMA6CQ9H3T2 930 aa9.5□□□□□ -0.89
USB1-212ENST00000566082 C1orf123Q9NWV4 160 aa9.5□□□□□ -0.89
USB1-212ENST00000566082 PURGQ9UJV8 347 aaKnown RBP9.5□□□□□ -0.89
USB1-212ENST00000566082 LRP12Q9Y561 859 aa9.5□□□□□ -0.89
USB1-212ENST00000566082 PATJQ8NI35 1801 aa9.5□□□□□ -0.89
USB1-212ENST00000566082 NPIPA2E9PIF3 369 aa9.5□□□□□ -0.89
USB1-212ENST00000566082 NPIPA3F8WFD2 350 aa9.5□□□□□ -0.89
USB1-212ENST00000566082 ICOSLGO75144 302 aa9.5□□□□□ -0.89
USB1-212ENST00000566082 TMEM127O75204 238 aa9.5□□□□□ -0.89
USB1-212ENST00000566082 ADAP1O75689 374 aa9.5□□□□□ -0.89
USB1-212ENST00000566082 NR2C1P13056 603 aa9.5□□□□□ -0.89
USB1-212ENST00000566082 MYOGP15173 224 aa9.5□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 76.2 ms