RNA–Protein interactions for RNA: ENST00000563226.1

SMPD3-203, Transcript of sphingomyelin phosphodiesterase 3, humanhuman

TSL 1 (best) BASIC

Gene SMPD3, Length 2,093 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD3-203ENST00000563226 PLEKHA1Q9HB21 404 aa16.91■□□□□ 0.3
SMPD3-203ENST00000563226 PCDHGA1Q9Y5H4 931 aa16.91■□□□□ 0.3
SMPD3-203ENST00000563226 CELSR3Q9NYQ7 3312 aa16.91■□□□□ 0.3
SMPD3-203ENST00000563226 TRAV6A0A075B6T7 132 aa16.9■□□□□ 0.3
SMPD3-203ENST00000563226 ARPC4-TTLL3A0A0A6YYG9 625 aa16.9■□□□□ 0.3
SMPD3-203ENST00000563226 GABARAPH6UMI1 98 aa16.9■□□□□ 0.3
SMPD3-203ENST00000563226 ARSBP15848 533 aa16.9■□□□□ 0.3
SMPD3-203ENST00000563226 DCTDP32321 178 aa16.9■□□□□ 0.3
SMPD3-203ENST00000563226 SUCLG1P53597 346 aaKnown RBP16.9■□□□□ 0.3
SMPD3-203ENST00000563226 PSMA6P60900 246 aaKnown RBP16.9■□□□□ 0.3
SMPD3-203ENST00000563226 FOXO1Q12778 655 aa16.9■□□□□ 0.3
SMPD3-203ENST00000563226 SGCAQ16586 387 aa16.9■□□□□ 0.3
SMPD3-203ENST00000563226 SFXN2Q96NB2 322 aa16.9■□□□□ 0.3
SMPD3-203ENST00000563226 HES7Q9BYE0 225 aa16.9■□□□□ 0.3
SMPD3-203ENST00000563226 RANGRFQ9HD47 186 aaPredicted RBP16.9■□□□□ 0.3
SMPD3-203ENST00000563226 NUDT15Q9NV35 164 aa16.9■□□□□ 0.3
SMPD3-203ENST00000563226 RCE1Q9Y256 329 aa16.9■□□□□ 0.3
SMPD3-203ENST00000563226 N6AMT1Q9Y5N5 214 aa16.9■□□□□ 0.3
SMPD3-203ENST00000563226 DCDC2BA2VCK2 349 aa16.9■□□□□ 0.3
SMPD3-203ENST00000563226 GJE1A6NN92 205 aa16.9■□□□□ 0.3
SMPD3-203ENST00000563226 KRT33AO76009 404 aa16.9■□□□□ 0.3
SMPD3-203ENST00000563226 NEURL1O76050 574 aa16.9■□□□□ 0.3
SMPD3-203ENST00000563226 GLSO94925 669 aaPredicted RBP16.9■□□□□ 0.3
SMPD3-203ENST00000563226 KDM4BO94953 1096 aa16.9■□□□□ 0.3
SMPD3-203ENST00000563226 GDF1P27539 372 aa16.9■□□□□ 0.3
SMPD3-203ENST00000563226 HSD11B1P28845 292 aa16.9■□□□□ 0.3
SMPD3-203ENST00000563226 SCAND1P57086 179 aa16.9■□□□□ 0.3
SMPD3-203ENST00000563226 TMEM255AQ5JRV8 349 aa16.9■□□□□ 0.3
SMPD3-203ENST00000563226 FGGYQ96C11 551 aa16.9■□□□□ 0.3
SMPD3-203ENST00000563226 FYTTD1Q96QD9 318 aaKnown RBP16.9■□□□□ 0.3
SMPD3-203ENST00000563226 SOX7Q9BT81 388 aa16.9■□□□□ 0.3
SMPD3-203ENST00000563226 DPAGT1Q9H3H5 408 aa16.9■□□□□ 0.3
SMPD3-203ENST00000563226 RYDENQ9NUL5 291 aaKnown RBP16.9■□□□□ 0.3
SMPD3-203ENST00000563226 RABL2AQ9UBK7 228 aaPredicted RBP16.9■□□□□ 0.3
SMPD3-203ENST00000563226 RABL2BQ9UNT1 228 aa16.9■□□□□ 0.3
SMPD3-203ENST00000563226 TMEM272A0A1B0GTI8 110 aa16.89■□□□□ 0.29
SMPD3-203ENST00000563226 CENPXA8MT69 81 aa16.89■□□□□ 0.29
SMPD3-203ENST00000563226 SULT1B1O43704 296 aa16.89■□□□□ 0.29
SMPD3-203ENST00000563226 CTAG2O75638 210 aa16.89■□□□□ 0.29
SMPD3-203ENST00000563226 RFC3P40938 356 aa16.89■□□□□ 0.29
SMPD3-203ENST00000563226 CLDN15P56746 228 aa16.89■□□□□ 0.29
SMPD3-203ENST00000563226 RAC3P60763 192 aa16.89■□□□□ 0.29
SMPD3-203ENST00000563226 DCAF10Q5QP82 559 aa16.89■□□□□ 0.29
SMPD3-203ENST00000563226 GLYATL3Q5SZD4 288 aa16.89■□□□□ 0.29
SMPD3-203ENST00000563226 C10orf128Q5T292 105 aa16.89■□□□□ 0.29
SMPD3-203ENST00000563226 GLT8D1Q68CQ7 371 aa16.89■□□□□ 0.29
SMPD3-203ENST00000563226 KCNE4Q8WWG9 221 aa16.89■□□□□ 0.29
SMPD3-203ENST00000563226 NABP1Q96AH0 204 aa16.89■□□□□ 0.29
SMPD3-203ENST00000563226 ZNF837Q96EG3 531 aaPredicted RBP16.89■□□□□ 0.29
SMPD3-203ENST00000563226 ADAT3Q96EY9 351 aaPredicted RBP16.89■□□□□ 0.29
SMPD3-203ENST00000563226 NEK6Q9HC98 313 aa16.89■□□□□ 0.29
SMPD3-203ENST00000563226 PARD6AQ9NPB6 346 aa16.89■□□□□ 0.29
SMPD3-203ENST00000563226 ZNF275Q9NSD4 429 aaPredicted RBP16.89■□□□□ 0.29
SMPD3-203ENST00000563226 ZNF319Q9P2F9 582 aa16.89■□□□□ 0.29
SMPD3-203ENST00000563226 RBMX2Q9Y388 322 aaKnown RBP16.89■□□□□ 0.29
SMPD3-203ENST00000563226 LOC100289279A0A1B0GTE1 492 aa16.89■□□□□ 0.29
SMPD3-203ENST00000563226 A0A1B0GTI1 187 aa16.89■□□□□ 0.29
SMPD3-203ENST00000563226 CXCL13O43927 109 aa16.89■□□□□ 0.29
SMPD3-203ENST00000563226 TCRBP04435 133 aa16.89■□□□□ 0.29
SMPD3-203ENST00000563226 CD37P11049 281 aa16.89■□□□□ 0.29
SMPD3-203ENST00000563226 CNR1P21554 472 aa16.89■□□□□ 0.29
SMPD3-203ENST00000563226 NTF4P34130 210 aa16.89■□□□□ 0.29
SMPD3-203ENST00000563226 MNDAP41218 407 aa16.89■□□□□ 0.29
SMPD3-203ENST00000563226 ZNF133P52736 654 aaPredicted RBP16.89■□□□□ 0.29
SMPD3-203ENST00000563226 CD83Q01151 205 aa16.89■□□□□ 0.29
SMPD3-203ENST00000563226 TAF13Q15543 124 aa16.89■□□□□ 0.29
SMPD3-203ENST00000563226 TRIP6Q15654 476 aaKnown RBP16.89■□□□□ 0.29
SMPD3-203ENST00000563226 ANKRD16Q6P6B7 361 aa16.89■□□□□ 0.29
SMPD3-203ENST00000563226 OR51E1Q8TCB6 317 aa16.89■□□□□ 0.29
SMPD3-203ENST00000563226 ROBO4Q8WZ75 1007 aa16.89■□□□□ 0.29
SMPD3-203ENST00000563226 ADGRG7Q96K78 797 aa16.89■□□□□ 0.29
SMPD3-203ENST00000563226 ZFP64Q9NPA5 681 aa16.89■□□□□ 0.29
SMPD3-203ENST00000563226 FOXD3Q9UJU5 478 aaPredicted RBP16.89■□□□□ 0.29
SMPD3-203ENST00000563226 XRCC3O43542 346 aa16.88■□□□□ 0.29
SMPD3-203ENST00000563226 SYT7O43581 403 aa16.88■□□□□ 0.29
SMPD3-203ENST00000563226 GMDSO60547 372 aa16.88■□□□□ 0.29
SMPD3-203ENST00000563226 HTR2CP28335 458 aa16.88■□□□□ 0.29
SMPD3-203ENST00000563226 CARD18P57730 90 aa16.88■□□□□ 0.29
SMPD3-203ENST00000563226 ZNF121P58317 390 aaPredicted RBP16.88■□□□□ 0.29
SMPD3-203ENST00000563226 SNTB2Q13425 540 aaKnown RBP16.88■□□□□ 0.29
SMPD3-203ENST00000563226 DYRK1AQ13627 763 aa16.88■□□□□ 0.29
SMPD3-203ENST00000563226 ENDOGQ14249 297 aaKnown RBP16.88■□□□□ 0.29
SMPD3-203ENST00000563226 OR1J2Q8NGS2 313 aa16.88■□□□□ 0.29
SMPD3-203ENST00000563226 FCAMRQ8WWV6 532 aa16.88■□□□□ 0.29
SMPD3-203ENST00000563226 CACNG6Q9BXT2 260 aa16.88■□□□□ 0.29
SMPD3-203ENST00000563226 OR2B2Q9GZK3 357 aa16.88■□□□□ 0.29
SMPD3-203ENST00000563226 CDV3Q9UKY7 258 aaKnown RBP16.88■□□□□ 0.29
SMPD3-203ENST00000563226 RHBDD3Q9Y3P4 386 aa16.88■□□□□ 0.29
SMPD3-203ENST00000563226 ZNF318Q5VUA4 2279 aa16.88■□□□□ 0.29
SMPD3-203ENST00000563226 CIB4A0PJX0 185 aa16.87■□□□□ 0.29
SMPD3-203ENST00000563226 MSR1P21757 451 aa16.87■□□□□ 0.29
SMPD3-203ENST00000563226 ITGA3P26006 1051 aa16.87■□□□□ 0.29
SMPD3-203ENST00000563226 BTG1P62324 171 aa16.87■□□□□ 0.29
SMPD3-203ENST00000563226 ABHD17BQ5VST6 288 aa16.87■□□□□ 0.29
SMPD3-203ENST00000563226 JMJD6Q6NYC1 403 aaPredicted RBP16.87■□□□□ 0.29
SMPD3-203ENST00000563226 FOXL2NBQ6ZUU3 175 aa16.87■□□□□ 0.29
SMPD3-203ENST00000563226 LUZP2Q86TE4 346 aa16.87■□□□□ 0.29
SMPD3-203ENST00000563226 LYPD6Q86Y78 171 aa16.87■□□□□ 0.29
SMPD3-203ENST00000563226 JAGN1Q8N5M9 183 aa16.87■□□□□ 0.29
SMPD3-203ENST00000563226 OR8B12Q8NGG6 310 aa16.87■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms