RNA–Protein interactions for RNA: ENST00000551111.1

PRPF40B-212, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 5

Gene PRPF40B, Length 1,061 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-212ENST00000551111 SCRN3Q0VDG4 424 aa9.67□□□□□ -0.86
PRPF40B-212ENST00000551111 KRR1Q13601 381 aaKnown RBP9.67□□□□□ -0.86
PRPF40B-212ENST00000551111 IFI44LQ53G44 452 aa9.67□□□□□ -0.86
PRPF40B-212ENST00000551111 ZMAT1Q5H9K5 638 aa9.67□□□□□ -0.86
PRPF40B-212ENST00000551111 C8orf82Q6P1X6 216 aaPredicted RBP9.67□□□□□ -0.86
PRPF40B-212ENST00000551111 TREML1Q86YW5 311 aa9.67□□□□□ -0.86
PRPF40B-212ENST00000551111 RNF113BQ8IZP6 322 aaKnown RBP9.67□□□□□ -0.86
PRPF40B-212ENST00000551111 SPICQ8N5J4 248 aa9.67□□□□□ -0.86
PRPF40B-212ENST00000551111 FAM86B1Q8N7N1 296 aa9.67□□□□□ -0.86
PRPF40B-212ENST00000551111 ATG16L2Q8NAA4 619 aa9.67□□□□□ -0.86
PRPF40B-212ENST00000551111 PCYOX1LQ8NBM8 494 aa9.67□□□□□ -0.86
PRPF40B-212ENST00000551111 FAM156AQ8NDB6 213 aa9.67□□□□□ -0.86
PRPF40B-212ENST00000551111 NPEPL1Q8NDH3 523 aa9.67□□□□□ -0.86
PRPF40B-212ENST00000551111 BHLHE23Q8NDY6 225 aa9.67□□□□□ -0.86
PRPF40B-212ENST00000551111 OR1F12Q8NHA8 337 aa9.67□□□□□ -0.86
PRPF40B-212ENST00000551111 PTP4A1Q93096 173 aa9.67□□□□□ -0.86
PRPF40B-212ENST00000551111 MEGF10Q96KG7 1140 aa9.67□□□□□ -0.86
PRPF40B-212ENST00000551111 VIPAS39Q9H9C1 493 aa9.67□□□□□ -0.86
PRPF40B-212ENST00000551111 NTN4Q9HB63 628 aa9.67□□□□□ -0.86
PRPF40B-212ENST00000551111 NRIP3Q9NQ35 241 aa9.67□□□□□ -0.86
PRPF40B-212ENST00000551111 IER3IP1Q9Y5U9 82 aa9.67□□□□□ -0.86
PRPF40B-212ENST00000551111 LHFPL6Q9Y693 200 aa9.67□□□□□ -0.86
PRPF40B-212ENST00000551111 CAPN7Q9Y6W3 813 aa9.67□□□□□ -0.86
PRPF40B-212ENST00000551111 TRBV4-1A0A0J9YWV2 114 aa9.66□□□□□ -0.86
PRPF40B-212ENST00000551111 HTR3EA5X5Y0 456 aa9.66□□□□□ -0.86
PRPF40B-212ENST00000551111 F5H5P2 479 aa9.66□□□□□ -0.86
PRPF40B-212ENST00000551111 XKRYO14609 159 aa9.66□□□□□ -0.86
PRPF40B-212ENST00000551111 KHDRBS3O75525 346 aaKnown RBP9.66□□□□□ -0.86
PRPF40B-212ENST00000551111 VIMP08670 466 aaKnown RBP9.66□□□□□ -0.86
PRPF40B-212ENST00000551111 COX4I1P13073 169 aa9.66□□□□□ -0.86
PRPF40B-212ENST00000551111 RAC2P15153 192 aa9.66□□□□□ -0.86
PRPF40B-212ENST00000551111 TNFRSF1AP19438 455 aa9.66□□□□□ -0.86
PRPF40B-212ENST00000551111 TNFSF4P23510 183 aa9.66□□□□□ -0.86
PRPF40B-212ENST00000551111 OMGP23515 440 aa9.66□□□□□ -0.86
PRPF40B-212ENST00000551111 SDHAP31040 664 aa9.66□□□□□ -0.86
PRPF40B-212ENST00000551111 MDH2P40926 338 aaKnown RBP9.66□□□□□ -0.86
PRPF40B-212ENST00000551111 OMPP47874 163 aa9.66□□□□□ -0.86
PRPF40B-212ENST00000551111 GUCY1A3Q02108 690 aa9.66□□□□□ -0.86
PRPF40B-212ENST00000551111 SRSF4Q08170 494 aaKnown RBP9.66□□□□□ -0.86
PRPF40B-212ENST00000551111 BAMBIQ13145 260 aa9.66□□□□□ -0.86
PRPF40B-212ENST00000551111 AQP6Q13520 282 aa9.66□□□□□ -0.86
PRPF40B-212ENST00000551111 MAPRE2Q15555 327 aa9.66□□□□□ -0.86
PRPF40B-212ENST00000551111 SLC9A3R2Q15599 337 aa9.66□□□□□ -0.86
PRPF40B-212ENST00000551111 ANKDD1AQ495B1 522 aa9.66□□□□□ -0.86
PRPF40B-212ENST00000551111 PRR31Q5SQ13 230 aa9.66□□□□□ -0.86
PRPF40B-212ENST00000551111 ARL9Q6T311 187 aa9.66□□□□□ -0.86
PRPF40B-212ENST00000551111 LYPD2Q6UXB3 125 aa9.66□□□□□ -0.86
PRPF40B-212ENST00000551111 FBXW12Q6X9E4 464 aa9.66□□□□□ -0.86
PRPF40B-212ENST00000551111 FKBP9P1Q75LS8 142 aa9.66□□□□□ -0.86
PRPF40B-212ENST00000551111 ZER1Q7Z7L7 766 aa9.66□□□□□ -0.86
PRPF40B-212ENST00000551111 MOGAT3Q86VF5 341 aa9.66□□□□□ -0.86
PRPF40B-212ENST00000551111 GLB1L2Q8IW92 636 aa9.66□□□□□ -0.86
PRPF40B-212ENST00000551111 LZICQ8WZA0 190 aa9.66□□□□□ -0.86
PRPF40B-212ENST00000551111 TMEM246Q9BRR3 403 aa9.66□□□□□ -0.86
PRPF40B-212ENST00000551111 UNKLQ9H9P5 680 aaKnown RBP9.66□□□□□ -0.86
PRPF40B-212ENST00000551111 VSX1Q9NZR4 365 aaPredicted RBP9.66□□□□□ -0.86
PRPF40B-212ENST00000551111 ENPP4Q9Y6X5 453 aa9.66□□□□□ -0.86
PRPF40B-212ENST00000551111 IGLV1-36A0A0B4J1U3 117 aa9.65□□□□□ -0.86
PRPF40B-212ENST00000551111 C5orf63A6NC05 138 aa9.65□□□□□ -0.86
PRPF40B-212ENST00000551111 NDUFB2O95178 105 aa9.65□□□□□ -0.86
PRPF40B-212ENST00000551111 MDKP21741 143 aaPredicted RBP9.65□□□□□ -0.86
PRPF40B-212ENST00000551111 IFNA8P32881 189 aa9.65□□□□□ -0.86
PRPF40B-212ENST00000551111 LSM6P62312 80 aaKnown RBP9.65□□□□□ -0.86
PRPF40B-212ENST00000551111 HIST1H3AP68431 136 aa9.65□□□□□ -0.86
PRPF40B-212ENST00000551111 FOXL1Q12952 345 aa9.65□□□□□ -0.86
PRPF40B-212ENST00000551111 KCNMB1Q16558 191 aa9.65□□□□□ -0.86
PRPF40B-212ENST00000551111 ESCO2Q56NI9 601 aa9.65□□□□□ -0.86
PRPF40B-212ENST00000551111 HIST2H3PS2Q5TEC6 136 aa9.65□□□□□ -0.86
PRPF40B-212ENST00000551111 LEG1Q6P5S2 330 aa9.65□□□□□ -0.86
PRPF40B-212ENST00000551111 RBMS3Q6XE24 437 aaKnown RBP9.65□□□□□ -0.86
PRPF40B-212ENST00000551111 BRD3OSQ6XYD6 125 aa9.65□□□□□ -0.86
PRPF40B-212ENST00000551111 HIST2H3AQ71DI3 136 aa9.65□□□□□ -0.86
PRPF40B-212ENST00000551111 KLBQ86Z14 1044 aa9.65□□□□□ -0.86
PRPF40B-212ENST00000551111 OR8G5Q8NG78 346 aa9.65□□□□□ -0.86
PRPF40B-212ENST00000551111 OR52E2Q8NGJ4 325 aa9.65□□□□□ -0.86
PRPF40B-212ENST00000551111 RSRC1Q96IZ7 334 aaKnown RBP9.65□□□□□ -0.86
PRPF40B-212ENST00000551111 C7orf34Q96L11 122 aa9.65□□□□□ -0.86
PRPF40B-212ENST00000551111 SLC30A2Q9BRI3 323 aa9.65□□□□□ -0.86
PRPF40B-212ENST00000551111 FUZQ9BT04 418 aa9.65□□□□□ -0.86
PRPF40B-212ENST00000551111 CDADC1Q9BWV3 514 aa9.65□□□□□ -0.86
PRPF40B-212ENST00000551111 FN3KQ9H479 309 aa9.65□□□□□ -0.86
PRPF40B-212ENST00000551111 SRA1Q9HD15 236 aaKnown RBP9.65□□□□□ -0.86
PRPF40B-212ENST00000551111 NDUFAF4Q9P032 175 aa9.65□□□□□ -0.86
PRPF40B-212ENST00000551111 NOTCH1P46531 2555 aa9.65□□□□□ -0.87
PRPF40B-212ENST00000551111 TRAV40A0A0B4J280 105 aa9.64□□□□□ -0.87
PRPF40B-212ENST00000551111 IGHV2-70DA0A0C4DH43 119 aa9.64□□□□□ -0.87
PRPF40B-212ENST00000551111 GSTA4O15217 222 aa9.64□□□□□ -0.87
PRPF40B-212ENST00000551111 AHCYL1O43865 530 aa9.64□□□□□ -0.87
PRPF40B-212ENST00000551111 PPP1R3DO95685 299 aa9.64□□□□□ -0.87
PRPF40B-212ENST00000551111 PLATP00750 562 aa9.64□□□□□ -0.87
PRPF40B-212ENST00000551111 H1F0P07305 194 aaKnown RBP9.64□□□□□ -0.87
PRPF40B-212ENST00000551111 RNASE1P07998 156 aaKnown RBP9.64□□□□□ -0.87
PRPF40B-212ENST00000551111 CENPAP49450 140 aa9.64□□□□□ -0.87
PRPF40B-212ENST00000551111 MAB21L1Q13394 359 aa9.64□□□□□ -0.87
PRPF40B-212ENST00000551111 MPPED2Q15777 294 aa9.64□□□□□ -0.87
PRPF40B-212ENST00000551111 FGD3Q5JSP0 725 aa9.64□□□□□ -0.87
PRPF40B-212ENST00000551111 SHISA2Q6UWI4 295 aa9.64□□□□□ -0.87
PRPF40B-212ENST00000551111 CFAP77Q6ZQR2 320 aa9.64□□□□□ -0.87
PRPF40B-212ENST00000551111 LINC00346Q8IVM7 164 aa9.64□□□□□ -0.87
PRPF40B-212ENST00000551111 OR6V1Q8N148 313 aa9.64□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms