RNA–Protein interactions for RNA: ENST00000547517.5

RAB5C-204, Transcript of RAB5C, member RAS oncogene family, humanhuman

TSL 1 (best) BASIC

Gene RAB5C, Length 1,167 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-204ENST00000547517 AP4S1Q9Y587 144 aa10.11□□□□□ -0.79
RAB5C-204ENST00000547517 PLSCR5A0PG75 271 aa10.1□□□□□ -0.79
RAB5C-204ENST00000547517 C17orf100A8MU93 164 aa10.1□□□□□ -0.79
RAB5C-204ENST00000547517 VWC2LB2RUY7 222 aa10.1□□□□□ -0.79
RAB5C-204ENST00000547517 TIMM8AO60220 97 aaPredicted RBP10.1□□□□□ -0.79
RAB5C-204ENST00000547517 HPXP02790 462 aa10.1□□□□□ -0.79
RAB5C-204ENST00000547517 FCGR1AP12314 374 aa10.1□□□□□ -0.79
RAB5C-204ENST00000547517 ZNF23P17027 643 aa10.1□□□□□ -0.79
RAB5C-204ENST00000547517 USF1P22415 310 aaPredicted RBP10.1□□□□□ -0.79
RAB5C-204ENST00000547517 FASP25445 335 aa10.1□□□□□ -0.79
RAB5C-204ENST00000547517 NR4A2P43354 598 aa10.1□□□□□ -0.79
RAB5C-204ENST00000547517 GINS1Q14691 196 aa10.1□□□□□ -0.79
RAB5C-204ENST00000547517 MOGQ16653 247 aa10.1□□□□□ -0.79
RAB5C-204ENST00000547517 ACSM5Q6NUN0 579 aa10.1□□□□□ -0.79
RAB5C-204ENST00000547517 ZNF511Q8NB15 262 aa10.1□□□□□ -0.79
RAB5C-204ENST00000547517 OR5K1Q8NHB7 308 aa10.1□□□□□ -0.79
RAB5C-204ENST00000547517 DNAJC9Q8WXX5 260 aa10.1□□□□□ -0.79
RAB5C-204ENST00000547517 NRBF2Q96F24 287 aa10.1□□□□□ -0.79
RAB5C-204ENST00000547517 MAP6Q96JE9 813 aa10.1□□□□□ -0.79
RAB5C-204ENST00000547517 ATF6BQ99941 703 aa10.1□□□□□ -0.79
RAB5C-204ENST00000547517 HCAR1Q9BXC0 346 aa10.1□□□□□ -0.79
RAB5C-204ENST00000547517 WDR76Q9H967 626 aa10.1□□□□□ -0.79
RAB5C-204ENST00000547517 PNRC2Q9NPJ4 139 aaKnown RBP10.1□□□□□ -0.79
RAB5C-204ENST00000547517 TBCCD1Q9NVR7 557 aa10.1□□□□□ -0.79
RAB5C-204ENST00000547517 PTTG3PQ9NZH4 202 aa10.1□□□□□ -0.79
RAB5C-204ENST00000547517 RTTNQ86VV8 2226 aa10.1□□□□□ -0.79
RAB5C-204ENST00000547517 SETD2Q9BYW2 2564 aaPredicted RBP10.1□□□□□ -0.79
RAB5C-204ENST00000547517 ZANQ9Y493 2812 aa10.09□□□□□ -0.79
RAB5C-204ENST00000547517 IGHV4-61A0A0C4DH41 118 aa10.09□□□□□ -0.79
RAB5C-204ENST00000547517 ZSCAN5BA6NJL1 495 aa10.09□□□□□ -0.79
RAB5C-204ENST00000547517 F5H5K5 113 aa10.09□□□□□ -0.79
RAB5C-204ENST00000547517 G3V2T6 193 aa10.09□□□□□ -0.79
RAB5C-204ENST00000547517 EBAG9O00559 213 aa10.09□□□□□ -0.79
RAB5C-204ENST00000547517 SURF4O15260 269 aa10.09□□□□□ -0.79
RAB5C-204ENST00000547517 TPD52L2O43399 206 aaKnown RBP10.09□□□□□ -0.79
RAB5C-204ENST00000547517 SPRY3O43610 288 aa10.09□□□□□ -0.79
RAB5C-204ENST00000547517 PAICSP22234 425 aaKnown RBP10.09□□□□□ -0.79
RAB5C-204ENST00000547517 FMO3P31513 532 aa10.09□□□□□ -0.79
RAB5C-204ENST00000547517 RGS6P49758 472 aa10.09□□□□□ -0.79
RAB5C-204ENST00000547517 ENTPD1P49961 510 aa10.09□□□□□ -0.79
RAB5C-204ENST00000547517 DAPP51397 102 aa10.09□□□□□ -0.79
RAB5C-204ENST00000547517 ZNF81P51508 661 aa10.09□□□□□ -0.79
RAB5C-204ENST00000547517 CCL8P80075 99 aa10.09□□□□□ -0.79
RAB5C-204ENST00000547517 LOXL1Q08397 574 aaPredicted RBP10.09□□□□□ -0.79
RAB5C-204ENST00000547517 TSTQ16762 297 aaKnown RBP10.09□□□□□ -0.79
RAB5C-204ENST00000547517 TMEM249Q2WGJ8 235 aa10.09□□□□□ -0.79
RAB5C-204ENST00000547517 PCGF3Q3KNV8 242 aa10.09□□□□□ -0.79
RAB5C-204ENST00000547517 TMEM236Q5W0B7 351 aa10.09□□□□□ -0.79
RAB5C-204ENST00000547517 PLBD1Q6P4A8 553 aa10.09□□□□□ -0.79
RAB5C-204ENST00000547517 FAHD1Q6P587 224 aa10.09□□□□□ -0.79
RAB5C-204ENST00000547517 DCXRQ7Z4W1 244 aa10.09□□□□□ -0.79
RAB5C-204ENST00000547517 AMIGO2Q86SJ2 522 aa10.09□□□□□ -0.79
RAB5C-204ENST00000547517 ZNF786Q8N393 782 aa10.09□□□□□ -0.79
RAB5C-204ENST00000547517 LRTOMTQ8WZ04 291 aa10.09□□□□□ -0.79
RAB5C-204ENST00000547517 DUS3LQ96G46 650 aaKnown RBP10.09□□□□□ -0.79
RAB5C-204ENST00000547517 DCLRE1CQ96SD1 692 aaKnown RBP10.09□□□□□ -0.79
RAB5C-204ENST00000547517 OR51V1Q9H2C8 321 aa10.09□□□□□ -0.79
RAB5C-204ENST00000547517 STARD10Q9Y365 291 aa10.09□□□□□ -0.79
RAB5C-204ENST00000547517 PRR23D1E9PI22 279 aaPredicted RBP10.08□□□□□ -0.8
RAB5C-204ENST00000547517 J3QW42 95 aa10.08□□□□□ -0.8
RAB5C-204ENST00000547517 CDC14BO60729 498 aa10.08□□□□□ -0.8
RAB5C-204ENST00000547517 IGHV1-46P01743 117 aa10.08□□□□□ -0.8
RAB5C-204ENST00000547517 HMGN1P05114 100 aa10.08□□□□□ -0.8
RAB5C-204ENST00000547517 ACSM4P0C7M7 580 aa10.08□□□□□ -0.8
RAB5C-204ENST00000547517 PRR23D2P0DMB1 279 aaPredicted RBP10.08□□□□□ -0.8
RAB5C-204ENST00000547517 ZNF16P17020 682 aaPredicted RBP10.08□□□□□ -0.8
RAB5C-204ENST00000547517 GIFP27352 417 aa10.08□□□□□ -0.8
RAB5C-204ENST00000547517 SLC6A9P48067 706 aa10.08□□□□□ -0.8
RAB5C-204ENST00000547517 MMP15P51511 669 aa10.08□□□□□ -0.8
RAB5C-204ENST00000547517 CDK5Q00535 292 aa10.08□□□□□ -0.8
RAB5C-204ENST00000547517 ECH1Q13011 328 aa10.08□□□□□ -0.8
RAB5C-204ENST00000547517 PSG7Q13046 419 aa10.08□□□□□ -0.8
RAB5C-204ENST00000547517 HLXQ14774 488 aaPredicted RBP10.08□□□□□ -0.8
RAB5C-204ENST00000547517 KPNB1Q14974 876 aaKnown RBP10.08□□□□□ -0.8
RAB5C-204ENST00000547517 KRTAP27-1Q3LI81 207 aa10.08□□□□□ -0.8
RAB5C-204ENST00000547517 KLHL12Q53G59 568 aa10.08□□□□□ -0.8
RAB5C-204ENST00000547517 ZMAT1Q5H9K5 638 aa10.08□□□□□ -0.8
RAB5C-204ENST00000547517 LINC01590Q5TEZ4 76 aa10.08□□□□□ -0.8
RAB5C-204ENST00000547517 HIPK1Q86Z02 1210 aa10.08□□□□□ -0.8
RAB5C-204ENST00000547517 ZDHHC13Q8IUH4 622 aa10.08□□□□□ -0.8
RAB5C-204ENST00000547517 ERI1Q8IV48 349 aaKnown RBP10.08□□□□□ -0.8
RAB5C-204ENST00000547517 PARP8Q8N3A8 854 aa10.08□□□□□ -0.8
RAB5C-204ENST00000547517 ZNF540Q8NDQ6 660 aa10.08□□□□□ -0.8
RAB5C-204ENST00000547517 OR10S1Q8NGN2 331 aa10.08□□□□□ -0.8
RAB5C-204ENST00000547517 OR6N2Q8NGY6 317 aa10.08□□□□□ -0.8
RAB5C-204ENST00000547517 PYDC1Q8WXC3 89 aa10.08□□□□□ -0.8
RAB5C-204ENST00000547517 RDH5Q92781 318 aa10.08□□□□□ -0.8
RAB5C-204ENST00000547517 YIPF5Q969M3 257 aa10.08□□□□□ -0.8
RAB5C-204ENST00000547517 APOBEC3DQ96AK3 386 aaPredicted RBP10.08□□□□□ -0.8
RAB5C-204ENST00000547517 CMBLQ96DG6 245 aa10.08□□□□□ -0.8
RAB5C-204ENST00000547517 PLEKHA8Q96JA3 519 aa10.08□□□□□ -0.8
RAB5C-204ENST00000547517 COG8Q96MW5 612 aa10.08□□□□□ -0.8
RAB5C-204ENST00000547517 COPS4Q9BT78 406 aa10.08□□□□□ -0.8
RAB5C-204ENST00000547517 TEX12Q9BXU0 123 aa10.08□□□□□ -0.8
RAB5C-204ENST00000547517 GABARAPL1Q9H0R8 117 aa10.08□□□□□ -0.8
RAB5C-204ENST00000547517 SEMA6AQ9H2E6 1030 aa10.08□□□□□ -0.8
RAB5C-204ENST00000547517 CHODLQ9H9P2 273 aa10.08□□□□□ -0.8
RAB5C-204ENST00000547517 SAP30LQ9HAJ7 183 aa10.08□□□□□ -0.8
RAB5C-204ENST00000547517 SLC25A19Q9HC21 320 aa10.08□□□□□ -0.8
RAB5C-204ENST00000547517 MSL2Q9HCI7 577 aa10.08□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 94.6 ms