RNA–Protein interactions for RNA: ENST00000543710.5

VPS13D-211, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 1 (best)

Gene VPS13D, Length 5,676 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-211ENST00000543710 SLC23A2Q9UGH3 650 aa7.12□□□□□ -1.27
VPS13D-211ENST00000543710 VDAC3Q9Y277 283 aa7.12□□□□□ -1.27
VPS13D-211ENST00000543710 ELOA3CA0A087WX78 387 aaPredicted RBP7.12□□□□□ -1.27
VPS13D-211ENST00000543710 C19orf67A6NJJ6 358 aa7.12□□□□□ -1.27
VPS13D-211ENST00000543710 SERPINE3A8MV23 424 aa7.12□□□□□ -1.27
VPS13D-211ENST00000543710 PLRG1O43660 514 aaKnown RBP7.12□□□□□ -1.27
VPS13D-211ENST00000543710 EPHA1P21709 976 aa7.12□□□□□ -1.27
VPS13D-211ENST00000543710 PNLIPRP2P54317 469 aa7.12□□□□□ -1.27
VPS13D-211ENST00000543710 EMP3P54852 163 aa7.12□□□□□ -1.27
VPS13D-211ENST00000543710 MRPL58Q14197 206 aaKnown RBP7.12□□□□□ -1.27
VPS13D-211ENST00000543710 OR8B8Q15620 311 aa7.12□□□□□ -1.27
VPS13D-211ENST00000543710 ZFP82Q8N141 532 aa7.12□□□□□ -1.27
VPS13D-211ENST00000543710 LMNTD1Q8N9Z9 388 aa7.12□□□□□ -1.27
VPS13D-211ENST00000543710 OR1E3Q8WZA6 343 aa7.12□□□□□ -1.27
VPS13D-211ENST00000543710 GHSRQ92847 366 aa7.12□□□□□ -1.27
VPS13D-211ENST00000543710 PINX1Q96BK5 328 aaKnown RBP7.12□□□□□ -1.27
VPS13D-211ENST00000543710 SMIM19Q96E16 107 aa7.12□□□□□ -1.27
VPS13D-211ENST00000543710 ZNF75AQ96N20 296 aa7.12□□□□□ -1.27
VPS13D-211ENST00000543710 SPNS1Q9H2V7 528 aa7.12□□□□□ -1.27
VPS13D-211ENST00000543710 DUSP21Q9H596 190 aa7.12□□□□□ -1.27
VPS13D-211ENST00000543710 CXorf36Q9H7Y0 433 aa7.12□□□□□ -1.27
VPS13D-211ENST00000543710 MMP26Q9NRE1 261 aa7.12□□□□□ -1.27
VPS13D-211ENST00000543710 H3BML4 177 aa7.12□□□□□ -1.27
VPS13D-211ENST00000543710 PIAS2O75928 621 aa7.12□□□□□ -1.27
VPS13D-211ENST00000543710 CAPNS1P04632 268 aa7.12□□□□□ -1.27
VPS13D-211ENST00000543710 OR1D4P47884 311 aa7.12□□□□□ -1.27
VPS13D-211ENST00000543710 FXYD4P59646 89 aa7.12□□□□□ -1.27
VPS13D-211ENST00000543710 CCL7P80098 99 aa7.12□□□□□ -1.27
VPS13D-211ENST00000543710 MFAP5Q13361 173 aa7.12□□□□□ -1.27
VPS13D-211ENST00000543710 RAB32Q13637 225 aa7.12□□□□□ -1.27
VPS13D-211ENST00000543710 ATP6V1FQ16864 119 aa7.12□□□□□ -1.27
VPS13D-211ENST00000543710 SFRP5Q5T4F7 317 aa7.12□□□□□ -1.27
VPS13D-211ENST00000543710 ZNF573Q86YE8 665 aa7.12□□□□□ -1.27
VPS13D-211ENST00000543710 ZNF561Q8N587 486 aa7.12□□□□□ -1.27
VPS13D-211ENST00000543710 DUSP19Q8WTR2 217 aa7.12□□□□□ -1.27
VPS13D-211ENST00000543710 ATF6BQ99941 703 aa7.12□□□□□ -1.27
VPS13D-211ENST00000543710 SMOC1Q9H4F8 434 aa7.12□□□□□ -1.27
VPS13D-211ENST00000543710 TAS2R5Q9NYW4 299 aa7.12□□□□□ -1.27
VPS13D-211ENST00000543710 RAXQ9Y2V3 346 aa7.12□□□□□ -1.27
VPS13D-211ENST00000543710 SH2D1BO14796 132 aa7.12□□□□□ -1.27
VPS13D-211ENST00000543710 ARRB2P32121 409 aa7.12□□□□□ -1.27
VPS13D-211ENST00000543710 LY6DQ14210 128 aa7.12□□□□□ -1.27
VPS13D-211ENST00000543710 VHLLQ6RSH7 139 aa7.12□□□□□ -1.27
VPS13D-211ENST00000543710 FJX1Q86VR8 437 aa7.12□□□□□ -1.27
VPS13D-211ENST00000543710 MAML2Q8IZL2 1156 aaPredicted RBP7.12□□□□□ -1.27
VPS13D-211ENST00000543710 GALNT16Q8N428 558 aa7.12□□□□□ -1.27
VPS13D-211ENST00000543710 FBXO27Q8NI29 283 aa7.12□□□□□ -1.27
VPS13D-211ENST00000543710 SGCZQ96LD1 299 aa7.12□□□□□ -1.27
VPS13D-211ENST00000543710 GPR61Q9BZJ8 451 aa7.12□□□□□ -1.27
VPS13D-211ENST00000543710 GALNT9Q9HCQ5 603 aa7.12□□□□□ -1.27
VPS13D-211ENST00000543710 DLL4Q9NR61 685 aa7.12□□□□□ -1.27
VPS13D-211ENST00000543710 YAE1D1Q9NRH1 226 aa7.12□□□□□ -1.27
VPS13D-211ENST00000543710 CA10Q9NS85 328 aa7.12□□□□□ -1.27
VPS13D-211ENST00000543710 ACER3Q9NUN7 267 aa7.12□□□□□ -1.27
VPS13D-211ENST00000543710 RPS10-NUDT3A0A1W2PQS6 291 aa7.11□□□□□ -1.27
VPS13D-211ENST00000543710 ZNF860A6NHJ4 632 aa7.11□□□□□ -1.27
VPS13D-211ENST00000543710 NPIPB8E9PQR5 432 aa7.11□□□□□ -1.27
VPS13D-211ENST00000543710 CLDN15P56746 228 aa7.11□□□□□ -1.27
VPS13D-211ENST00000543710 Q6ZNB5 142 aa7.11□□□□□ -1.27
VPS13D-211ENST00000543710 AAED1Q7RTV5 226 aa7.11□□□□□ -1.27
VPS13D-211ENST00000543710 RBMXL3Q8N7X1 1067 aaKnown RBP7.11□□□□□ -1.27
VPS13D-211ENST00000543710 OR6S1Q8NH40 331 aa7.11□□□□□ -1.27
VPS13D-211ENST00000543710 C11orf40Q8WZ69 217 aa7.11□□□□□ -1.27
VPS13D-211ENST00000543710 TTC9Q92623 222 aa7.11□□□□□ -1.27
VPS13D-211ENST00000543710 PIGTQ969N2 578 aa7.11□□□□□ -1.27
VPS13D-211ENST00000543710 FN3KRPQ9HA64 309 aa7.11□□□□□ -1.27
VPS13D-211ENST00000543710 BEX1Q9HBH7 125 aa7.11□□□□□ -1.27
VPS13D-211ENST00000543710 PURGQ9UJV8 347 aaKnown RBP7.11□□□□□ -1.27
VPS13D-211ENST00000543710 RHBDD3Q9Y3P4 386 aa7.11□□□□□ -1.27
VPS13D-211ENST00000543710 A0A1B0GWA3 101 aa7.11□□□□□ -1.27
VPS13D-211ENST00000543710 LILRA5A6NI73 299 aa7.11□□□□□ -1.27
VPS13D-211ENST00000543710 K7ERQ8 282 aa7.11□□□□□ -1.27
VPS13D-211ENST00000543710 K7ESM1 405 aa7.11□□□□□ -1.27
VPS13D-211ENST00000543710 HMGN4O00479 90 aa7.11□□□□□ -1.27
VPS13D-211ENST00000543710 FABP7O15540 132 aa7.11□□□□□ -1.27
VPS13D-211ENST00000543710 SGCEO43556 437 aa7.11□□□□□ -1.27
VPS13D-211ENST00000543710 PPICP45877 212 aa7.11□□□□□ -1.27
VPS13D-211ENST00000543710 CARD18P57730 90 aa7.11□□□□□ -1.27
VPS13D-211ENST00000543710 SYPL1Q16563 259 aa7.11□□□□□ -1.27
VPS13D-211ENST00000543710 SYT14P1Q58G82 188 aa7.11□□□□□ -1.27
VPS13D-211ENST00000543710 Q6ZS52 159 aa7.11□□□□□ -1.27
VPS13D-211ENST00000543710 C1orf174Q8IYL3 243 aa7.11□□□□□ -1.27
VPS13D-211ENST00000543710 FAM181AQ8N9Y4 354 aa7.11□□□□□ -1.27
VPS13D-211ENST00000543710 OR10J5Q8NHC4 309 aa7.11□□□□□ -1.27
VPS13D-211ENST00000543710 NUDT8Q8WV74 236 aa7.11□□□□□ -1.27
VPS13D-211ENST00000543710 RAB1CQ92928 201 aa7.11□□□□□ -1.27
VPS13D-211ENST00000543710 RAB18Q9NP72 206 aa7.11□□□□□ -1.27
VPS13D-211ENST00000543710 XRCC3O43542 346 aa7.11□□□□□ -1.27
VPS13D-211ENST00000543710 FADS1O60427 444 aa7.11□□□□□ -1.27
VPS13D-211ENST00000543710 SNRNP70P08621 437 aaKnown RBP7.11□□□□□ -1.27
VPS13D-211ENST00000543710 SPP1P10451 314 aa7.11□□□□□ -1.27
VPS13D-211ENST00000543710 APEX1P27695 318 aaKnown RBP7.11□□□□□ -1.27
VPS13D-211ENST00000543710 FGF9P31371 208 aaPredicted RBP7.11□□□□□ -1.27
VPS13D-211ENST00000543710 BCL6P41182 706 aa7.11□□□□□ -1.27
VPS13D-211ENST00000543710 MTCP1P56278 107 aa7.11□□□□□ -1.27
VPS13D-211ENST00000543710 CLDN17P56750 224 aa7.11□□□□□ -1.27
VPS13D-211ENST00000543710 SURF2Q15527 256 aaPredicted RBP7.11□□□□□ -1.27
VPS13D-211ENST00000543710 PAQR9Q6ZVX9 377 aa7.11□□□□□ -1.27
VPS13D-211ENST00000543710 SHARPINQ9H0F6 387 aa7.11□□□□□ -1.27
VPS13D-211ENST00000543710 CHST8Q9H2A9 424 aa7.11□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 103.4 ms