RNA–Protein interactions for RNA: ENST00000543627.1

DDB1-222, Transcript of damage specific DNA binding protein 1, human

TSL 5

Gene DDB1, Length 540 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DDB1-222	ENST00000543627	GRK5	P34947	590 aa		9.46	□□□□□ -0.9
DDB1-222	ENST00000543627	SLC6A9	P48067	706 aa		9.46	□□□□□ -0.9
DDB1-222	ENST00000543627	DAP	P51397	102 aa		9.46	□□□□□ -0.9
DDB1-222	ENST00000543627	ZNF81	P51508	661 aa		9.46	□□□□□ -0.9
DDB1-222	ENST00000543627	KPNB1	Q14974	876 aa	Known RBP	9.46	□□□□□ -0.9
DDB1-222	ENST00000543627	ATP6AP1	Q15904	470 aa		9.46	□□□□□ -0.9
DDB1-222	ENST00000543627	SNAPC1	Q16533	368 aa		9.46	□□□□□ -0.9
DDB1-222	ENST00000543627	ZNF362	Q5T0B9	420 aa	Predicted RBP	9.46	□□□□□ -0.9
DDB1-222	ENST00000543627	SLC18B1	Q6NT16	456 aa		9.46	□□□□□ -0.9
DDB1-222	ENST00000543627	PLBD1	Q6P4A8	553 aa		9.46	□□□□□ -0.9
DDB1-222	ENST00000543627	CD300LD	Q6UXZ3	194 aa		9.46	□□□□□ -0.9
DDB1-222	ENST00000543627	ASRGL1	Q7L266	308 aa		9.46	□□□□□ -0.9
DDB1-222	ENST00000543627	HIPK1	Q86Z02	1210 aa		9.46	□□□□□ -0.9
DDB1-222	ENST00000543627	ZDHHC13	Q8IUH4	622 aa		9.46	□□□□□ -0.9
DDB1-222	ENST00000543627	ERI1	Q8IV48	349 aa	Known RBP	9.46	□□□□□ -0.9
DDB1-222	ENST00000543627	C10orf105	Q8TEF2	133 aa		9.46	□□□□□ -0.9
DDB1-222	ENST00000543627	UTP4	Q969X6	686 aa	Known RBP	9.46	□□□□□ -0.9
DDB1-222	ENST00000543627	CMBL	Q96DG6	245 aa		9.46	□□□□□ -0.9
DDB1-222	ENST00000543627	MARS2	Q96GW9	593 aa	Known RBP	9.46	□□□□□ -0.9
DDB1-222	ENST00000543627	NARFL	Q9H6Q4	476 aa		9.46	□□□□□ -0.9
DDB1-222	ENST00000543627	MSL2	Q9HCI7	577 aa		9.46	□□□□□ -0.9
DDB1-222	ENST00000543627	CMC2	Q9NRP2	79 aa		9.46	□□□□□ -0.9
DDB1-222	ENST00000543627	KRT84	Q9NSB2	600 aa		9.46	□□□□□ -0.9
DDB1-222	ENST00000543627	FLNA	P21333	2647 aa	Known RBP	9.46	□□□□□ -0.9
DDB1-222	ENST00000543627	LOC390937	A0A1W2PQ73	354 aa		9.45	□□□□□ -0.9
DDB1-222	ENST00000543627	C17orf100	A8MU93	164 aa		9.45	□□□□□ -0.9
DDB1-222	ENST00000543627	MITF	O75030	526 aa	Predicted RBP	9.45	□□□□□ -0.9
DDB1-222	ENST00000543627	FCGR1A	P12314	374 aa		9.45	□□□□□ -0.9
DDB1-222	ENST00000543627	USF1	P22415	310 aa	Predicted RBP	9.45	□□□□□ -0.9
DDB1-222	ENST00000543627	PRKX	P51817	358 aa		9.45	□□□□□ -0.9
DDB1-222	ENST00000543627	CRISP1	P54107	249 aa		9.45	□□□□□ -0.9
DDB1-222	ENST00000543627	PRSS12	P56730	875 aa		9.45	□□□□□ -0.9
DDB1-222	ENST00000543627	EIF2B1	Q14232	305 aa	Known RBP	9.45	□□□□□ -0.9
DDB1-222	ENST00000543627	HLX	Q14774	488 aa	Predicted RBP	9.45	□□□□□ -0.9
DDB1-222	ENST00000543627	DCXR	Q7Z4W1	244 aa		9.45	□□□□□ -0.9
DDB1-222	ENST00000543627	NAA40	Q86UY6	237 aa		9.45	□□□□□ -0.9
DDB1-222	ENST00000543627	CPO	Q8IVL8	374 aa		9.45	□□□□□ -0.9
DDB1-222	ENST00000543627	OR5L1	Q8NGL2	311 aa		9.45	□□□□□ -0.9
DDB1-222	ENST00000543627	OR6N2	Q8NGY6	317 aa		9.45	□□□□□ -0.9
DDB1-222	ENST00000543627	ZMYND19	Q96E35	227 aa	Predicted RBP	9.45	□□□□□ -0.9
DDB1-222	ENST00000543627	NRBF2	Q96F24	287 aa		9.45	□□□□□ -0.9
DDB1-222	ENST00000543627	DDO	Q99489	341 aa		9.45	□□□□□ -0.9
DDB1-222	ENST00000543627	COQ7	Q99807	217 aa		9.45	□□□□□ -0.9
DDB1-222	ENST00000543627	ATF6B	Q99941	703 aa		9.45	□□□□□ -0.9
DDB1-222	ENST00000543627	COPS4	Q9BT78	406 aa		9.45	□□□□□ -0.9
DDB1-222	ENST00000543627	RBM4	Q9BWF3	364 aa	Known RBP	9.45	□□□□□ -0.9
DDB1-222	ENST00000543627	HCAR1	Q9BXC0	346 aa		9.45	□□□□□ -0.9
DDB1-222	ENST00000543627	BPESC1	Q9GZL8	116 aa		9.45	□□□□□ -0.9
DDB1-222	ENST00000543627	HDHD2	Q9H0R4	259 aa		9.45	□□□□□ -0.9
DDB1-222	ENST00000543627	YAE1D1	Q9NRH1	226 aa		9.45	□□□□□ -0.9
DDB1-222	ENST00000543627	TBCCD1	Q9NVR7	557 aa		9.45	□□□□□ -0.9
DDB1-222	ENST00000543627	CYB5R1	Q9UHQ9	305 aa		9.45	□□□□□ -0.9
DDB1-222	ENST00000543627	LRP5L	A4QPB2	252 aa		9.44	□□□□□ -0.9
DDB1-222	ENST00000543627	SURF4	O15260	269 aa		9.44	□□□□□ -0.9
DDB1-222	ENST00000543627	PPIH	O43447	177 aa	Known RBP	9.44	□□□□□ -0.9
DDB1-222	ENST00000543627	IGHV3-13	P01766	116 aa		9.44	□□□□□ -0.9
DDB1-222	ENST00000543627	HEXA	P06865	529 aa		9.44	□□□□□ -0.9
DDB1-222	ENST00000543627	GSTT1	P30711	240 aa		9.44	□□□□□ -0.9
DDB1-222	ENST00000543627	GGT2	P36268	569 aa		9.44	□□□□□ -0.9
DDB1-222	ENST00000543627	NR4A2	P43354	598 aa		9.44	□□□□□ -0.9
DDB1-222	ENST00000543627	ENTPD1	P49961	510 aa		9.44	□□□□□ -0.9
DDB1-222	ENST00000543627	SLC25A1	P53007	311 aa		9.44	□□□□□ -0.9
DDB1-222	ENST00000543627	TPTE	P56180	551 aa		9.44	□□□□□ -0.9
DDB1-222	ENST00000543627	PPP2R2B	Q00005	443 aa		9.44	□□□□□ -0.9
DDB1-222	ENST00000543627	CDK5	Q00535	292 aa		9.44	□□□□□ -0.9
DDB1-222	ENST00000543627	PSG7	Q13046	419 aa		9.44	□□□□□ -0.9
DDB1-222	ENST00000543627	OR2T2	Q6IF00	324 aa		9.44	□□□□□ -0.9
DDB1-222	ENST00000543627	DNM1P46	Q6ZS02	220 aa		9.44	□□□□□ -0.9
DDB1-222	ENST00000543627	ZNF771	Q7L3S4	317 aa	Predicted RBP	9.44	□□□□□ -0.9
DDB1-222	ENST00000543627	THEM6	Q8WUY1	208 aa		9.44	□□□□□ -0.9
DDB1-222	ENST00000543627	RDH5	Q92781	318 aa		9.44	□□□□□ -0.9
DDB1-222	ENST00000543627	PTP4A1	Q93096	173 aa		9.44	□□□□□ -0.9
DDB1-222	ENST00000543627	SPTSSA	Q969W0	71 aa		9.44	□□□□□ -0.9
DDB1-222	ENST00000543627	MAP6	Q96JE9	813 aa		9.44	□□□□□ -0.9
DDB1-222	ENST00000543627	INTS14	Q96SY0	518 aa		9.44	□□□□□ -0.9
DDB1-222	ENST00000543627	RIBC2	Q9H4K1	309 aa		9.44	□□□□□ -0.9
DDB1-222	ENST00000543627	MYOZ1	Q9NP98	299 aa	Predicted RBP	9.44	□□□□□ -0.9
DDB1-222	ENST00000543627	H2AFY2	Q9P0M6	372 aa	Predicted RBP	9.44	□□□□□ -0.9
DDB1-222	ENST00000543627	COMMD3-BMI1	R4GMX3	469 aa		9.44	□□□□□ -0.9
DDB1-222	ENST00000543627	IGLV3-9	A0A075B6K5	115 aa		9.43	□□□□□ -0.9
DDB1-222	ENST00000543627	INAFM1	C9JVW0	142 aa		9.43	□□□□□ -0.9
DDB1-222	ENST00000543627	TBX1	O43435	398 aa		9.43	□□□□□ -0.9
DDB1-222	ENST00000543627	NCR1	O76036	304 aa		9.43	□□□□□ -0.9
DDB1-222	ENST00000543627	GLCE	O94923	617 aa		9.43	□□□□□ -0.9
DDB1-222	ENST00000543627	BAG2	O95816	211 aa		9.43	□□□□□ -0.9
DDB1-222	ENST00000543627	IGHV1-46	P01743	117 aa		9.43	□□□□□ -0.9
DDB1-222	ENST00000543627	SLC2A1	P11166	492 aa		9.43	□□□□□ -0.9
DDB1-222	ENST00000543627	HSD11B1	P28845	292 aa		9.43	□□□□□ -0.9
DDB1-222	ENST00000543627	NAA10	P41227	235 aa	Predicted RBP	9.43	□□□□□ -0.9
DDB1-222	ENST00000543627	GPR6	P46095	362 aa	Predicted RBP	9.43	□□□□□ -0.9
DDB1-222	ENST00000543627	RGS6	P49758	472 aa		9.43	□□□□□ -0.9
DDB1-222	ENST00000543627	HIST1H3A	P68431	136 aa		9.43	□□□□□ -0.9
DDB1-222	ENST00000543627	MVK	Q03426	396 aa		9.43	□□□□□ -0.9
DDB1-222	ENST00000543627	ECH1	Q13011	328 aa		9.43	□□□□□ -0.9
DDB1-222	ENST00000543627	MALL	Q13021	153 aa		9.43	□□□□□ -0.9
DDB1-222	ENST00000543627	APOF	Q13790	326 aa		9.43	□□□□□ -0.9
DDB1-222	ENST00000543627	PTGES3	Q15185	160 aa	Known RBP	9.43	□□□□□ -0.9
DDB1-222	ENST00000543627	AVPI1	Q5T686	147 aa		9.43	□□□□□ -0.9
DDB1-222	ENST00000543627	HIST2H3PS2	Q5TEC6	136 aa		9.43	□□□□□ -0.9
DDB1-222	ENST00000543627	MBNL2	Q5VZF2	373 aa	Known RBP	9.43	□□□□□ -0.9

Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms