RNA–Protein interactions for RNA: ENST00000509258.5

RNF4-212, Transcript of ring finger protein 4, humanhuman

TSL 1 (best) BASIC

Gene RNF4, Length 893 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-212ENST00000509258 COX5BP10606 129 aa9.2□□□□□ -0.94
RNF4-212ENST00000509258 HIST1H1CP16403 213 aaKnown RBP9.2□□□□□ -0.94
RNF4-212ENST00000509258 TNFRSF1AP19438 455 aa9.2□□□□□ -0.94
RNF4-212ENST00000509258 RRM2P31350 389 aa9.2□□□□□ -0.94
RNF4-212ENST00000509258 GSSP48637 474 aa9.2□□□□□ -0.94
RNF4-212ENST00000509258 SEC61A1P61619 476 aaKnown RBP9.2□□□□□ -0.94
RNF4-212ENST00000509258 HIST1H3AP68431 136 aa9.2□□□□□ -0.94
RNF4-212ENST00000509258 PPP1R8Q12972 351 aaKnown RBP9.2□□□□□ -0.94
RNF4-212ENST00000509258 CDK5R2Q13319 367 aa9.2□□□□□ -0.94
RNF4-212ENST00000509258 AQP6Q13520 282 aa9.2□□□□□ -0.94
RNF4-212ENST00000509258 KCNMB1Q16558 191 aa9.2□□□□□ -0.94
RNF4-212ENST00000509258 MTX3Q5HYI7 312 aa9.2□□□□□ -0.94
RNF4-212ENST00000509258 HIST2H3PS2Q5TEC6 136 aa9.2□□□□□ -0.94
RNF4-212ENST00000509258 GPR139Q6DWJ6 353 aa9.2□□□□□ -0.94
RNF4-212ENST00000509258 SMARCD3Q6STE5 483 aa9.2□□□□□ -0.94
RNF4-212ENST00000509258 LYPD4Q6UWN0 246 aa9.2□□□□□ -0.94
RNF4-212ENST00000509258 DPY19L2P2Q6ZN68 376 aa9.2□□□□□ -0.94
RNF4-212ENST00000509258 CFAP77Q6ZQR2 320 aa9.2□□□□□ -0.94
RNF4-212ENST00000509258 HIST2H3AQ71DI3 136 aa9.2□□□□□ -0.94
RNF4-212ENST00000509258 RRM2BQ7LG56 351 aa9.2□□□□□ -0.94
RNF4-212ENST00000509258 LINC00346Q8IVM7 164 aa9.2□□□□□ -0.94
RNF4-212ENST00000509258 GLB1L2Q8IW92 636 aa9.2□□□□□ -0.94
RNF4-212ENST00000509258 DEFB107AQ8IZN7 70 aa9.2□□□□□ -0.94
RNF4-212ENST00000509258 SPICQ8N5J4 248 aa9.2□□□□□ -0.94
RNF4-212ENST00000509258 OR9Q2Q8NGE9 314 aa9.2□□□□□ -0.94
RNF4-212ENST00000509258 OR4K13Q8NH42 304 aa9.2□□□□□ -0.94
RNF4-212ENST00000509258 OR1F12Q8NHA8 337 aa9.2□□□□□ -0.94
RNF4-212ENST00000509258 FANK1Q8TC84 345 aa9.2□□□□□ -0.94
RNF4-212ENST00000509258 CMBLQ96DG6 245 aa9.2□□□□□ -0.94
RNF4-212ENST00000509258 ERMAPQ96PL5 475 aaPredicted RBP9.2□□□□□ -0.94
RNF4-212ENST00000509258 SIGLEC11Q96RL6 698 aa9.2□□□□□ -0.94
RNF4-212ENST00000509258 NMNAT3Q96T66 252 aa9.2□□□□□ -0.94
RNF4-212ENST00000509258 SLC6A7Q99884 636 aa9.2□□□□□ -0.94
RNF4-212ENST00000509258 EGLN3Q9H6Z9 239 aa9.2□□□□□ -0.94
RNF4-212ENST00000509258 C7orf69Q9H7B7 122 aa9.2□□□□□ -0.94
RNF4-212ENST00000509258 MRPL22Q9NWU5 206 aaKnown RBP9.2□□□□□ -0.94
RNF4-212ENST00000509258 PLEK2Q9NYT0 353 aa9.2□□□□□ -0.94
RNF4-212ENST00000509258 UBAP1Q9NZ09 502 aa9.2□□□□□ -0.94
RNF4-212ENST00000509258 PTTG3PQ9NZH4 202 aa9.2□□□□□ -0.94
RNF4-212ENST00000509258 TAGLN3Q9UI15 199 aa9.2□□□□□ -0.94
RNF4-212ENST00000509258 B9D1Q9UPM9 204 aa9.2□□□□□ -0.94
RNF4-212ENST00000509258 AURKCQ9UQB9 309 aa9.2□□□□□ -0.94
RNF4-212ENST00000509258 FAM32AQ9Y421 112 aaKnown RBP9.2□□□□□ -0.94
RNF4-212ENST00000509258 PPIAL4EA0A075B759 164 aa9.19□□□□□ -0.94
RNF4-212ENST00000509258 PPIAL4CA0A0B4J2A2 164 aa9.19□□□□□ -0.94
RNF4-212ENST00000509258 TCRBV5S2A0A599 114 aa9.19□□□□□ -0.94
RNF4-212ENST00000509258 OR6C68A6NDL8 312 aa9.19□□□□□ -0.94
RNF4-212ENST00000509258 PPIAL4DF5H284 164 aa9.19□□□□□ -0.94
RNF4-212ENST00000509258 H0YL77 283 aa9.19□□□□□ -0.94
RNF4-212ENST00000509258 SURF4O15260 269 aa9.19□□□□□ -0.94
RNF4-212ENST00000509258 AHCYL1O43865 530 aa9.19□□□□□ -0.94
RNF4-212ENST00000509258 GADD45GO95257 159 aa9.19□□□□□ -0.94
RNF4-212ENST00000509258 IGHV2-70P01814 119 aa9.19□□□□□ -0.94
RNF4-212ENST00000509258 PPIAL4FP0DN26 164 aa9.19□□□□□ -0.94
RNF4-212ENST00000509258 SELEP16581 610 aa9.19□□□□□ -0.94
RNF4-212ENST00000509258 ADRA2CP18825 462 aa9.19□□□□□ -0.94
RNF4-212ENST00000509258 KITLGP21583 273 aa9.19□□□□□ -0.94
RNF4-212ENST00000509258 ZFP36P26651 326 aaKnown RBP9.19□□□□□ -0.94
RNF4-212ENST00000509258 LSM6P62312 80 aaKnown RBP9.19□□□□□ -0.94
RNF4-212ENST00000509258 TNFAIP6P98066 277 aaPredicted RBP9.19□□□□□ -0.94
RNF4-212ENST00000509258 HOXA4Q00056 320 aaPredicted RBP9.19□□□□□ -0.94
RNF4-212ENST00000509258 SCRN3Q0VDG4 424 aa9.19□□□□□ -0.94
RNF4-212ENST00000509258 RFX4Q33E94 735 aa9.19□□□□□ -0.94
RNF4-212ENST00000509258 KRTAP27-1Q3LI81 207 aa9.19□□□□□ -0.94
RNF4-212ENST00000509258 AWAT1Q58HT5 328 aa9.19□□□□□ -0.94
RNF4-212ENST00000509258 PGBD2Q6P3X8 592 aa9.19□□□□□ -0.94
RNF4-212ENST00000509258 LEG1Q6P5S2 330 aa9.19□□□□□ -0.94
RNF4-212ENST00000509258 CYP2R1Q6VVX0 501 aa9.19□□□□□ -0.94
RNF4-212ENST00000509258 CPLX4Q7Z7G2 160 aa9.19□□□□□ -0.94
RNF4-212ENST00000509258 NAA40Q86UY6 237 aa9.19□□□□□ -0.94
RNF4-212ENST00000509258 OR5AS1Q8N127 324 aa9.19□□□□□ -0.94
RNF4-212ENST00000509258 KLHL36Q8N4N3 616 aa9.19□□□□□ -0.94
RNF4-212ENST00000509258 SDR9C7Q8NEX9 313 aa9.19□□□□□ -0.94
RNF4-212ENST00000509258 SLC26A10Q8NG04 563 aa9.19□□□□□ -0.94
RNF4-212ENST00000509258 OR4C15Q8NGM1 316 aa9.19□□□□□ -0.94
RNF4-212ENST00000509258 OR8D4Q8NGM9 314 aa9.19□□□□□ -0.94
RNF4-212ENST00000509258 ITLN1Q8WWA0 313 aa9.19□□□□□ -0.94
RNF4-212ENST00000509258 POP5Q969H6 163 aaKnown RBP9.19□□□□□ -0.94
RNF4-212ENST00000509258 NSMCE2Q96MF7 247 aa9.19□□□□□ -0.94
RNF4-212ENST00000509258 DDOQ99489 341 aa9.19□□□□□ -0.94
RNF4-212ENST00000509258 BTBD10Q9BSF8 475 aa9.19□□□□□ -0.94
RNF4-212ENST00000509258 WDR76Q9H967 626 aa9.19□□□□□ -0.94
RNF4-212ENST00000509258 ZMAT3Q9HA38 289 aaKnown RBP9.19□□□□□ -0.94
RNF4-212ENST00000509258 SRA1Q9HD15 236 aaKnown RBP9.19□□□□□ -0.94
RNF4-212ENST00000509258 PNRC2Q9NPJ4 139 aaKnown RBP9.19□□□□□ -0.94
RNF4-212ENST00000509258 TBCCD1Q9NVR7 557 aa9.19□□□□□ -0.94
RNF4-212ENST00000509258 OPN4Q9UHM6 478 aa9.19□□□□□ -0.94
RNF4-212ENST00000509258 MAGEL2Q9UJ55 1249 aa9.19□□□□□ -0.94
RNF4-212ENST00000509258 NPTNQ9Y639 398 aa9.19□□□□□ -0.94
RNF4-212ENST00000509258 IGHV3-64DA0A0J9YX35 117 aa9.18□□□□□ -0.94
RNF4-212ENST00000509258 MLNRO43193 412 aa9.18□□□□□ -0.94
RNF4-212ENST00000509258 FPR3P25089 353 aa9.18□□□□□ -0.94
RNF4-212ENST00000509258 PYCR1P32322 319 aa9.18□□□□□ -0.94
RNF4-212ENST00000509258 GGT2P36268 569 aa9.18□□□□□ -0.94
RNF4-212ENST00000509258 RPS27P42677 84 aaKnown RBP9.18□□□□□ -0.94
RNF4-212ENST00000509258 UBA52P62987 128 aaKnown RBP9.18□□□□□ -0.94
RNF4-212ENST00000509258 FOXL1Q12952 345 aa9.18□□□□□ -0.94
RNF4-212ENST00000509258 ARMCX4Q5H9R4 360 aa9.18□□□□□ -0.94
RNF4-212ENST00000509258 SAMD4BQ5PRF9 694 aaKnown RBP9.18□□□□□ -0.94
RNF4-212ENST00000509258 ZNF362Q5T0B9 420 aaPredicted RBP9.18□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms