RNA–Protein interactions for RNA: ENST00000502393.5

SFXN1-203, Transcript of sideroflexin 1, humanhuman

TSL 2 BASIC

Gene SFXN1, Length 637 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN1-203ENST00000502393 HIST1H3AP68431 136 aa16.65■□□□□ 0.26
SFXN1-203ENST00000502393 HIST2H3PS2Q5TEC6 136 aa16.65■□□□□ 0.26
SFXN1-203ENST00000502393 FBXW12Q6X9E4 464 aa16.65■□□□□ 0.26
SFXN1-203ENST00000502393 HIST2H3AQ71DI3 136 aa16.65■□□□□ 0.26
SFXN1-203ENST00000502393 JAZF1Q86VZ6 243 aa16.65■□□□□ 0.26
SFXN1-203ENST00000502393 SPICQ8N5J4 248 aa16.65■□□□□ 0.26
SFXN1-203ENST00000502393 NANPQ8TBE9 248 aa16.65■□□□□ 0.26
SFXN1-203ENST00000502393 APOBEC3DQ96AK3 386 aaPredicted RBP16.65■□□□□ 0.26
SFXN1-203ENST00000502393 COQ7Q99807 217 aa16.65■□□□□ 0.26
SFXN1-203ENST00000502393 HDHD2Q9H0R4 259 aa16.65■□□□□ 0.26
SFXN1-203ENST00000502393 OR52D1Q9H346 318 aa16.65■□□□□ 0.26
SFXN1-203ENST00000502393 PCDHB10Q9UN67 800 aa16.65■□□□□ 0.26
SFXN1-203ENST00000502393 B9D1Q9UPM9 204 aa16.65■□□□□ 0.26
SFXN1-203ENST00000502393 PPP1R3CQ9UQK1 317 aa16.65■□□□□ 0.26
SFXN1-203ENST00000502393 LHFPL6Q9Y693 200 aa16.65■□□□□ 0.26
SFXN1-203ENST00000502393 IGLV1-36A0A0B4J1U3 117 aa16.64■□□□□ 0.25
SFXN1-203ENST00000502393 OR10H3O60404 316 aa16.64■□□□□ 0.25
SFXN1-203ENST00000502393 FOXH1O75593 365 aa16.64■□□□□ 0.25
SFXN1-203ENST00000502393 GPANK1O95872 356 aa16.64■□□□□ 0.25
SFXN1-203ENST00000502393 RENP00797 406 aa16.64■□□□□ 0.25
SFXN1-203ENST00000502393 FABP3P05413 133 aa16.64■□□□□ 0.25
SFXN1-203ENST00000502393 LCN2P80188 198 aa16.64■□□□□ 0.25
SFXN1-203ENST00000502393 COX10Q12887 443 aa16.64■□□□□ 0.25
SFXN1-203ENST00000502393 MEP1BQ16820 701 aa16.64■□□□□ 0.25
SFXN1-203ENST00000502393 TMEM155Q4W5P6 130 aa16.64■□□□□ 0.25
SFXN1-203ENST00000502393 SLC27A4Q6P1M0 643 aa16.64■□□□□ 0.25
SFXN1-203ENST00000502393 LEG1Q6P5S2 330 aa16.64■□□□□ 0.25
SFXN1-203ENST00000502393 ZNF771Q7L3S4 317 aaPredicted RBP16.64■□□□□ 0.25
SFXN1-203ENST00000502393 LRRC28Q86X40 367 aaPredicted RBP16.64■□□□□ 0.25
SFXN1-203ENST00000502393 OR6V1Q8N148 313 aa16.64■□□□□ 0.25
SFXN1-203ENST00000502393 KLHL36Q8N4N3 616 aa16.64■□□□□ 0.25
SFXN1-203ENST00000502393 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP16.64■□□□□ 0.25
SFXN1-203ENST00000502393 NSMCE2Q96MF7 247 aa16.64■□□□□ 0.25
SFXN1-203ENST00000502393 OR2V2Q96R30 315 aa16.64■□□□□ 0.25
SFXN1-203ENST00000502393 CDRT15Q96T59 188 aa16.64■□□□□ 0.25
SFXN1-203ENST00000502393 NMNAT3Q96T66 252 aa16.64■□□□□ 0.25
SFXN1-203ENST00000502393 C7orf69Q9H7B7 122 aa16.64■□□□□ 0.25
SFXN1-203ENST00000502393 SRA1Q9HD15 236 aaKnown RBP16.64■□□□□ 0.25
SFXN1-203ENST00000502393 IL1RAPQ9NPH3 570 aa16.64■□□□□ 0.25
SFXN1-203ENST00000502393 DCAF16Q9NXF7 216 aa16.64■□□□□ 0.25
SFXN1-203ENST00000502393 ARPC2O15144 300 aa16.63■□□□□ 0.25
SFXN1-203ENST00000502393 IDH3BO43837 385 aa16.63■□□□□ 0.25
SFXN1-203ENST00000502393 HIST1H1CP16403 213 aaKnown RBP16.63■□□□□ 0.25
SFXN1-203ENST00000502393 NOS3P29474 1203 aa16.63■□□□□ 0.25
SFXN1-203ENST00000502393 MSX2P35548 267 aaPredicted RBP16.63■□□□□ 0.25
SFXN1-203ENST00000502393 ERFP50548 548 aa16.63■□□□□ 0.25
SFXN1-203ENST00000502393 HILS1P60008 231 aa16.63■□□□□ 0.25
SFXN1-203ENST00000502393 BTG1P62324 171 aa16.63■□□□□ 0.25
SFXN1-203ENST00000502393 HLXQ14774 488 aaPredicted RBP16.63■□□□□ 0.25
SFXN1-203ENST00000502393 SPATS1Q496A3 300 aa16.63■□□□□ 0.25
SFXN1-203ENST00000502393 ZSCAN2Q7Z7L9 614 aaPredicted RBP16.63■□□□□ 0.25
SFXN1-203ENST00000502393 OR8G5Q8NG78 346 aa16.63■□□□□ 0.25
SFXN1-203ENST00000502393 ITLN1Q8WWA0 313 aa16.63■□□□□ 0.25
SFXN1-203ENST00000502393 JMJD8Q96S16 334 aa16.63■□□□□ 0.25
SFXN1-203ENST00000502393 IFT27Q9BW83 186 aa16.63■□□□□ 0.25
SFXN1-203ENST00000502393 PTTG3PQ9NZH4 202 aa16.63■□□□□ 0.25
SFXN1-203ENST00000502393 TAGLN3Q9UI15 199 aa16.63■□□□□ 0.25
SFXN1-203ENST00000502393 TMCC3Q9ULS5 477 aa16.63■□□□□ 0.25
SFXN1-203ENST00000502393 IFNL4K9M1U5 179 aa16.62■□□□□ 0.25
SFXN1-203ENST00000502393 ADRA2CP18825 462 aa16.62■□□□□ 0.25
SFXN1-203ENST00000502393 ZFP36P26651 326 aaKnown RBP16.62■□□□□ 0.25
SFXN1-203ENST00000502393 RRM2P31350 389 aa16.62■□□□□ 0.25
SFXN1-203ENST00000502393 HNRNPA0Q13151 305 aaKnown RBP16.62■□□□□ 0.25
SFXN1-203ENST00000502393 SLC36A3Q495N2 470 aa16.62■□□□□ 0.25
SFXN1-203ENST00000502393 CORO6Q6QEF8 472 aa16.62■□□□□ 0.25
SFXN1-203ENST00000502393 ZBTB46Q86UZ6 589 aa16.62■□□□□ 0.25
SFXN1-203ENST00000502393 OR5AS1Q8N127 324 aa16.62■□□□□ 0.25
SFXN1-203ENST00000502393 ATG16L2Q8NAA4 619 aa16.62■□□□□ 0.25
SFXN1-203ENST00000502393 SLC26A10Q8NG04 563 aa16.62■□□□□ 0.25
SFXN1-203ENST00000502393 OR13G1Q8NGZ3 307 aa16.62■□□□□ 0.25
SFXN1-203ENST00000502393 OR4K13Q8NH42 304 aa16.62■□□□□ 0.25
SFXN1-203ENST00000502393 GNPDA2Q8TDQ7 276 aa16.62■□□□□ 0.25
SFXN1-203ENST00000502393 ZNF582Q96NG8 517 aaPredicted RBP16.62■□□□□ 0.25
SFXN1-203ENST00000502393 SIGLEC11Q96RL6 698 aa16.62■□□□□ 0.25
SFXN1-203ENST00000502393 SUCNR1Q9BXA5 334 aa16.62■□□□□ 0.25
SFXN1-203ENST00000502393 PATZ1Q9HBE1 687 aaKnown RBP16.62■□□□□ 0.25
SFXN1-203ENST00000502393 GCM1Q9NP62 436 aa16.62■□□□□ 0.25
SFXN1-203ENST00000502393 RPRD1BQ9NQG5 326 aaKnown RBP16.62■□□□□ 0.25
SFXN1-203ENST00000502393 NDE1Q9NXR1 346 aa16.62■□□□□ 0.25
SFXN1-203ENST00000502393 OPN4Q9UHM6 478 aa16.62■□□□□ 0.25
SFXN1-203ENST00000502393 POLR3KQ9Y2Y1 108 aaPredicted RBP16.62■□□□□ 0.25
SFXN1-203ENST00000502393 GSSP48637 474 aa16.61■□□□□ 0.25
SFXN1-203ENST00000502393 TSPAN31Q12999 210 aa16.61■□□□□ 0.25
SFXN1-203ENST00000502393 ECH1Q13011 328 aa16.61■□□□□ 0.25
SFXN1-203ENST00000502393 RSPO1Q2MKA7 263 aaPredicted RBP16.61■□□□□ 0.25
SFXN1-203ENST00000502393 OR2T2Q6IF00 324 aa16.61■□□□□ 0.25
SFXN1-203ENST00000502393 SLC18B1Q6NT16 456 aa16.61■□□□□ 0.25
SFXN1-203ENST00000502393 C16orf89Q6UX73 402 aa16.61■□□□□ 0.25
SFXN1-203ENST00000502393 COLCA1Q6ZS62 124 aa16.61■□□□□ 0.25
SFXN1-203ENST00000502393 CDADC1Q9BWV3 514 aa16.61■□□□□ 0.25
SFXN1-203ENST00000502393 ARL2BPQ9Y2Y0 163 aa16.61■□□□□ 0.25
SFXN1-203ENST00000502393 DYSFO75923 2080 aa16.61■□□□□ 0.25
SFXN1-203ENST00000502393 OR6C68A6NDL8 312 aa16.6■□□□□ 0.25
SFXN1-203ENST00000502393 TMEM178BH3BS89 294 aa16.6■□□□□ 0.25
SFXN1-203ENST00000502393 TRIM77I1YAP6 450 aa16.6■□□□□ 0.25
SFXN1-203ENST00000502393 RGS9O75916 674 aaPredicted RBP16.6■□□□□ 0.25
SFXN1-203ENST00000502393 KRT36O76013 467 aa16.6■□□□□ 0.25
SFXN1-203ENST00000502393 MDH2P40926 338 aaKnown RBP16.6■□□□□ 0.25
SFXN1-203ENST00000502393 SLC6A9P48067 706 aa16.6■□□□□ 0.25
SFXN1-203ENST00000502393 ZMYND11Q15326 602 aa16.6■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 99.7 ms