RNA–Protein interactions for RNA: ENST00000502250.5

ATXN3-206, Transcript of ataxin 3, humanhuman

TSL 1 (best) BASIC

Gene ATXN3, Length 1,259 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-206ENST00000502250 LRRC25Q8N386 305 aaPredicted RBP4.46□□□□□ -1.7
ATXN3-206ENST00000502250 MORN4Q8NDC4 146 aa4.46□□□□□ -1.7
ATXN3-206ENST00000502250 OR10G3Q8NGC4 313 aa4.46□□□□□ -1.7
ATXN3-206ENST00000502250 RHOXF1Q8NHV9 184 aa4.46□□□□□ -1.7
ATXN3-206ENST00000502250 RDH11Q8TC12 318 aa4.46□□□□□ -1.7
ATXN3-206ENST00000502250 ZPLD1Q8TCW7 415 aa4.46□□□□□ -1.7
ATXN3-206ENST00000502250 PPWD1Q96BP3 646 aaKnown RBP4.46□□□□□ -1.7
ATXN3-206ENST00000502250 RMND5BQ96G75 393 aaPredicted RBP4.46□□□□□ -1.7
ATXN3-206ENST00000502250 FUNDC2Q9BWH2 189 aa4.46□□□□□ -1.7
ATXN3-206ENST00000502250 MS4A8Q9BY19 250 aa4.46□□□□□ -1.7
ATXN3-206ENST00000502250 EXO5Q9H790 373 aa4.46□□□□□ -1.7
ATXN3-206ENST00000502250 OARD1Q9Y530 152 aa4.46□□□□□ -1.7
ATXN3-206ENST00000502250 TEX264Q9Y6I9 313 aa4.46□□□□□ -1.7
ATXN3-206ENST00000502250 SONP18583 2426 aaKnown RBP4.46□□□□□ -1.7
ATXN3-206ENST00000502250 CUBNO60494 3623 aa4.46□□□□□ -1.7
ATXN3-206ENST00000502250 YLPM1P49750 1951 aaKnown RBP4.45□□□□□ -1.7
ATXN3-206ENST00000502250 USF3Q68DE3 2245 aa4.45□□□□□ -1.7
ATXN3-206ENST00000502250 ARPC1BO15143 372 aaKnown RBP4.45□□□□□ -1.7
ATXN3-206ENST00000502250 HCN1O60741 890 aa4.45□□□□□ -1.7
ATXN3-206ENST00000502250 P04436 131 aa4.45□□□□□ -1.7
ATXN3-206ENST00000502250 HSD17B1P14061 328 aa4.45□□□□□ -1.7
ATXN3-206ENST00000502250 ATP5A1P25705 553 aaKnown RBP4.45□□□□□ -1.7
ATXN3-206ENST00000502250 FNTAP49354 379 aa4.45□□□□□ -1.7
ATXN3-206ENST00000502250 HNMTP50135 292 aa4.45□□□□□ -1.7
ATXN3-206ENST00000502250 HERV-K104P63124 156 aa4.45□□□□□ -1.7
ATXN3-206ENST00000502250 HERVK_113P63132 956 aa4.45□□□□□ -1.7
ATXN3-206ENST00000502250 ERVK-8P63133 956 aa4.45□□□□□ -1.7
ATXN3-206ENST00000502250 KCNJ2P63252 427 aa4.45□□□□□ -1.7
ATXN3-206ENST00000502250 STX4Q12846 297 aa4.45□□□□□ -1.7
ATXN3-206ENST00000502250 DOC2AQ14183 400 aa4.45□□□□□ -1.7
ATXN3-206ENST00000502250 TGFBIQ15582 683 aa4.45□□□□□ -1.7
ATXN3-206ENST00000502250 TRADDQ15628 312 aa4.45□□□□□ -1.7
ATXN3-206ENST00000502250 FBXL19-AS1Q494R0 122 aa4.45□□□□□ -1.7
ATXN3-206ENST00000502250 ACSF3Q4G176 576 aaPredicted RBP4.45□□□□□ -1.7
ATXN3-206ENST00000502250 ATAD3CQ5T2N8 411 aa4.45□□□□□ -1.7
ATXN3-206ENST00000502250 OPN5Q6U736 354 aa4.45□□□□□ -1.7
ATXN3-206ENST00000502250 FRA10AC1Q70Z53 315 aa4.45□□□□□ -1.7
ATXN3-206ENST00000502250 ADAMTSL2Q86TH1 951 aa4.45□□□□□ -1.7
ATXN3-206ENST00000502250 SERPINA12Q8IW75 414 aa4.45□□□□□ -1.7
ATXN3-206ENST00000502250 SLC35F6Q8N357 371 aa4.45□□□□□ -1.7
ATXN3-206ENST00000502250 ACOT4Q8N9L9 421 aa4.45□□□□□ -1.7
ATXN3-206ENST00000502250 SNX31Q8N9S9 440 aa4.45□□□□□ -1.7
ATXN3-206ENST00000502250 TTLQ8NG68 377 aa4.45□□□□□ -1.7
ATXN3-206ENST00000502250 OR8K3Q8NH51 312 aa4.45□□□□□ -1.7
ATXN3-206ENST00000502250 NEIL3Q8TAT5 605 aa4.45□□□□□ -1.7
ATXN3-206ENST00000502250 LINC01560Q8TB33 94 aa4.45□□□□□ -1.7
ATXN3-206ENST00000502250 NUBPLQ8TB37 319 aa4.45□□□□□ -1.7
ATXN3-206ENST00000502250 PAQR8Q8TEZ7 354 aa4.45□□□□□ -1.7
ATXN3-206ENST00000502250 RNASE6Q93091 150 aaKnown RBP4.45□□□□□ -1.7
ATXN3-206ENST00000502250 UCN3Q969E3 161 aa4.45□□□□□ -1.7
ATXN3-206ENST00000502250 SLCO4A1Q96BD0 722 aa4.45□□□□□ -1.7
ATXN3-206ENST00000502250 RAB39BQ96DA2 213 aa4.45□□□□□ -1.7
ATXN3-206ENST00000502250 WDR34Q96EX3 536 aa4.45□□□□□ -1.7
ATXN3-206ENST00000502250 VPS39Q96JC1 886 aa4.45□□□□□ -1.7
ATXN3-206ENST00000502250 JSRP1Q96MG2 331 aaPredicted RBP4.45□□□□□ -1.7
ATXN3-206ENST00000502250 ERVK-6Q9BXR3 956 aa4.45□□□□□ -1.7
ATXN3-206ENST00000502250 PLEKHF2Q9H8W4 249 aa4.45□□□□□ -1.7
ATXN3-206ENST00000502250 CAB39LQ9H9S4 337 aa4.45□□□□□ -1.7
ATXN3-206ENST00000502250 LYRM4Q9HD34 91 aa4.45□□□□□ -1.7
ATXN3-206ENST00000502250 MID1IP1Q9NPA3 183 aa4.45□□□□□ -1.7
ATXN3-206ENST00000502250 B4GALT7Q9UBV7 327 aa4.45□□□□□ -1.7
ATXN3-206ENST00000502250 SEC14L4Q9UDX3 406 aa4.45□□□□□ -1.7
ATXN3-206ENST00000502250 MRPS33Q9Y291 106 aaKnown RBP4.45□□□□□ -1.7
ATXN3-206ENST00000502250 CHCHD2Q9Y6H1 151 aaPredicted RBP4.45□□□□□ -1.7
ATXN3-206ENST00000502250 FREM1Q5H8C1 2179 aa4.45□□□□□ -1.7
ATXN3-206ENST00000502250 MXRA5Q9NR99 2828 aa4.45□□□□□ -1.7
ATXN3-206ENST00000502250 C15orf38-AP3S2A0A0A6YYH1 394 aa4.44□□□□□ -1.7
ATXN3-206ENST00000502250 TRIM3O75382 744 aaPredicted RBP4.44□□□□□ -1.7
ATXN3-206ENST00000502250 GMNNO75496 209 aa4.44□□□□□ -1.7
ATXN3-206ENST00000502250 SCELO95171 688 aa4.44□□□□□ -1.7
ATXN3-206ENST00000502250 EPPINO95925 133 aa4.44□□□□□ -1.7
ATXN3-206ENST00000502250 C1QAP02745 245 aa4.44□□□□□ -1.7
ATXN3-206ENST00000502250 SNRPCP09234 159 aaKnown RBP4.44□□□□□ -1.7
ATXN3-206ENST00000502250 CCDC166P0CW27 439 aa4.44□□□□□ -1.7
ATXN3-206ENST00000502250 GABRA1P14867 456 aa4.44□□□□□ -1.7
ATXN3-206ENST00000502250 HIST1H1TP22492 207 aaPredicted RBP4.44□□□□□ -1.7
ATXN3-206ENST00000502250 CPN2P22792 545 aa4.44□□□□□ -1.7
ATXN3-206ENST00000502250 GDF1P27539 372 aa4.44□□□□□ -1.7
ATXN3-206ENST00000502250 SLCO1A2P46721 670 aa4.44□□□□□ -1.7
ATXN3-206ENST00000502250 FBXW4P57775 412 aa4.44□□□□□ -1.7
ATXN3-206ENST00000502250 TNFRSF17Q02223 184 aa4.44□□□□□ -1.7
ATXN3-206ENST00000502250 CHIT1Q13231 466 aa4.44□□□□□ -1.7
ATXN3-206ENST00000502250 SLAMF1Q13291 335 aa4.44□□□□□ -1.7
ATXN3-206ENST00000502250 KLF5Q13887 457 aaPredicted RBP4.44□□□□□ -1.7
ATXN3-206ENST00000502250 SERTAD2Q14140 314 aa4.44□□□□□ -1.7
ATXN3-206ENST00000502250 EXOSC7Q15024 291 aaKnown RBP4.44□□□□□ -1.7
ATXN3-206ENST00000502250 EBPQ15125 230 aaKnown RBP4.44□□□□□ -1.7
ATXN3-206ENST00000502250 PDK4Q16654 411 aa4.44□□□□□ -1.7
ATXN3-206ENST00000502250 DEFB113Q30KQ7 82 aa4.44□□□□□ -1.7
ATXN3-206ENST00000502250 FAM219BQ5XKK7 198 aa4.44□□□□□ -1.7
ATXN3-206ENST00000502250 SLC22A10Q63ZE4 541 aa4.44□□□□□ -1.7
ATXN3-206ENST00000502250 OLFML2AQ68BL7 652 aa4.44□□□□□ -1.7
ATXN3-206ENST00000502250 ZNF600Q6ZNG1 722 aa4.44□□□□□ -1.7
ATXN3-206ENST00000502250 BIVMQ86UB2 503 aa4.44□□□□□ -1.7
ATXN3-206ENST00000502250 LRRC8AQ8IWT6 810 aa4.44□□□□□ -1.7
ATXN3-206ENST00000502250 BBOF1Q8ND07 529 aa4.44□□□□□ -1.7
ATXN3-206ENST00000502250 FBXO36Q8NEA4 188 aa4.44□□□□□ -1.7
ATXN3-206ENST00000502250 OR5L2Q8NGL0 311 aa4.44□□□□□ -1.7
ATXN3-206ENST00000502250 SLC22A8Q8TCC7 542 aa4.44□□□□□ -1.7
ATXN3-206ENST00000502250 ACTRT1Q8TDG2 376 aa4.44□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms