RNA–Protein interactions for RNA: ENST00000495100.1

GPC1-209, Transcript of glypican 1, humanhuman

TSL 1 (best)

Gene GPC1, Length 3,525 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-209ENST00000495100 ZNF679Q8IYX0 411 aa12.07□□□□□ -0.48
GPC1-209ENST00000495100 LSMEM1Q8N8F7 131 aa12.07□□□□□ -0.48
GPC1-209ENST00000495100 OR2AK2Q8NG84 335 aa12.07□□□□□ -0.48
GPC1-209ENST00000495100 ANGPTL6Q8NI99 470 aa12.07□□□□□ -0.48
GPC1-209ENST00000495100 MARCH1Q8TCQ1 289 aa12.07□□□□□ -0.48
GPC1-209ENST00000495100 RAB40AQ8WXH6 277 aa12.07□□□□□ -0.48
GPC1-209ENST00000495100 DCUN1D4Q92564 292 aa12.07□□□□□ -0.48
GPC1-209ENST00000495100 ZNF764Q96H86 408 aaPredicted RBP12.07□□□□□ -0.48
GPC1-209ENST00000495100 PGAM5Q96HS1 289 aa12.07□□□□□ -0.48
GPC1-209ENST00000495100 TAS2R5Q9NYW4 299 aa12.07□□□□□ -0.48
GPC1-209ENST00000495100 MEIKINA0A087WXM9 373 aa12.07□□□□□ -0.48
GPC1-209ENST00000495100 ZNF354AO60765 605 aaPredicted RBP12.07□□□□□ -0.48
GPC1-209ENST00000495100 RLN2P04090 185 aa12.07□□□□□ -0.48
GPC1-209ENST00000495100 TPOP07202 933 aa12.07□□□□□ -0.48
GPC1-209ENST00000495100 PPP3CBP16298 524 aa12.07□□□□□ -0.48
GPC1-209ENST00000495100 LTBRP36941 435 aa12.07□□□□□ -0.48
GPC1-209ENST00000495100 CLDN17P56750 224 aa12.07□□□□□ -0.48
GPC1-209ENST00000495100 MFAP5Q13361 173 aa12.07□□□□□ -0.48
GPC1-209ENST00000495100 CEBPEQ15744 281 aa12.07□□□□□ -0.48
GPC1-209ENST00000495100 AANATQ16613 207 aa12.07□□□□□ -0.48
GPC1-209ENST00000495100 NAA40Q86UY6 237 aa12.07□□□□□ -0.48
GPC1-209ENST00000495100 FJX1Q86VR8 437 aa12.07□□□□□ -0.48
GPC1-209ENST00000495100 OR4D6Q8NGJ1 314 aa12.07□□□□□ -0.48
GPC1-209ENST00000495100 ROBO4Q8WZ75 1007 aa12.07□□□□□ -0.48
GPC1-209ENST00000495100 NICN1Q9BSH3 213 aa12.07□□□□□ -0.48
GPC1-209ENST00000495100 TMPRSS13Q9BYE2 586 aa12.07□□□□□ -0.48
GPC1-209ENST00000495100 C8orf33Q9H7E9 229 aaPredicted RBP12.07□□□□□ -0.48
GPC1-209ENST00000495100 B3GALT1Q9Y5Z6 326 aa12.07□□□□□ -0.48
GPC1-209ENST00000495100 SULT2B1O00204 365 aa12.07□□□□□ -0.48
GPC1-209ENST00000495100 ANGPTL7O43827 346 aa12.07□□□□□ -0.48
GPC1-209ENST00000495100 ZNF141Q15928 474 aa12.07□□□□□ -0.48
GPC1-209ENST00000495100 BPHLQ86WA6 291 aaPredicted RBP12.07□□□□□ -0.48
GPC1-209ENST00000495100 PDZD9Q8IXQ8 264 aa12.07□□□□□ -0.48
GPC1-209ENST00000495100 HRH4Q9H3N8 390 aa12.07□□□□□ -0.48
GPC1-209ENST00000495100 IGHV1OR15-9A0A0B4J2B8 117 aa12.06□□□□□ -0.48
GPC1-209ENST00000495100 LOC100289279A0A1B0GTE1 492 aa12.06□□□□□ -0.48
GPC1-209ENST00000495100 A8MVM7 634 aa12.06□□□□□ -0.48
GPC1-209ENST00000495100 J3QRE1 110 aa12.06□□□□□ -0.48
GPC1-209ENST00000495100 ARPC3O15145 178 aa12.06□□□□□ -0.48
GPC1-209ENST00000495100 BCAT2O15382 392 aaPredicted RBP12.06□□□□□ -0.48
GPC1-209ENST00000495100 GLSO94925 669 aaPredicted RBP12.06□□□□□ -0.48
GPC1-209ENST00000495100 TIAF1O95411 115 aa12.06□□□□□ -0.48
GPC1-209ENST00000495100 F12P00748 615 aaPredicted RBP12.06□□□□□ -0.48
GPC1-209ENST00000495100 TMEM225BP0DP42 221 aa12.06□□□□□ -0.48
GPC1-209ENST00000495100 AMY2BP19961 511 aa12.06□□□□□ -0.48
GPC1-209ENST00000495100 OPRM1P35372 400 aa12.06□□□□□ -0.48
GPC1-209ENST00000495100 ZNF440Q8IYI8 595 aa12.06□□□□□ -0.48
GPC1-209ENST00000495100 SLC38A9Q8NBW4 561 aa12.06□□□□□ -0.48
GPC1-209ENST00000495100 OR5T2Q8NGG2 359 aa12.06□□□□□ -0.48
GPC1-209ENST00000495100 PCOLCE2Q9UKZ9 415 aa12.06□□□□□ -0.48
GPC1-209ENST00000495100 TEX13DA0A0J9YY54 714 aaPredicted RBP12.06□□□□□ -0.48
GPC1-209ENST00000495100 LPLP06858 475 aa12.06□□□□□ -0.48
GPC1-209ENST00000495100 OR4E1P0C645 316 aa12.06□□□□□ -0.48
GPC1-209ENST00000495100 PNLIPP16233 465 aa12.06□□□□□ -0.48
GPC1-209ENST00000495100 OTX2P32243 289 aa12.06□□□□□ -0.48
GPC1-209ENST00000495100 AKR1C3P42330 323 aa12.06□□□□□ -0.48
GPC1-209ENST00000495100 ELAVL1Q15717 326 aaKnown RBP12.06□□□□□ -0.48
GPC1-209ENST00000495100 GUSBP11Q6P575 273 aa12.06□□□□□ -0.48
GPC1-209ENST00000495100 GLIPR1L1Q6UWM5 242 aa12.06□□□□□ -0.48
GPC1-209ENST00000495100 GLDNQ6ZMI3 551 aaPredicted RBP12.06□□□□□ -0.48
GPC1-209ENST00000495100 ADGRG3Q86Y34 549 aa12.06□□□□□ -0.48
GPC1-209ENST00000495100 OR51T1Q8NGJ9 327 aa12.06□□□□□ -0.48
GPC1-209ENST00000495100 TMEM234Q8WY98 164 aa12.06□□□□□ -0.48
GPC1-209ENST00000495100 CDCA3Q99618 268 aaPredicted RBP12.06□□□□□ -0.48
GPC1-209ENST00000495100 SOSTQ9BQB4 213 aa12.06□□□□□ -0.48
GPC1-209ENST00000495100 PLEK2Q9NYT0 353 aa12.06□□□□□ -0.48
GPC1-209ENST00000495100 HIF3AQ9Y2N7 669 aa12.06□□□□□ -0.48
GPC1-209ENST00000495100 A0A0A6YYH2 397 aa12.06□□□□□ -0.48
GPC1-209ENST00000495100 A6NJ64 397 aa12.06□□□□□ -0.48
GPC1-209ENST00000495100 FAM157BP0CG42 384 aa12.06□□□□□ -0.48
GPC1-209ENST00000495100 RPS4Y1P22090 263 aaKnown RBP12.06□□□□□ -0.48
GPC1-209ENST00000495100 RPL35P42766 123 aaKnown RBP12.06□□□□□ -0.48
GPC1-209ENST00000495100 POLR2HP52434 150 aaKnown RBP12.06□□□□□ -0.48
GPC1-209ENST00000495100 HSF1Q00613 529 aa12.06□□□□□ -0.48
GPC1-209ENST00000495100 ACSM1Q08AH1 577 aa12.06□□□□□ -0.48
GPC1-209ENST00000495100 NKAIN1Q4KMZ8 207 aa12.06□□□□□ -0.48
GPC1-209ENST00000495100 TIGD3Q6B0B8 471 aa12.06□□□□□ -0.48
GPC1-209ENST00000495100 SIGIRRQ6IA17 410 aa12.06□□□□□ -0.48
GPC1-209ENST00000495100 UEVLDQ8IX04 471 aa12.06□□□□□ -0.48
GPC1-209ENST00000495100 VRK1Q99986 396 aaPredicted RBP12.06□□□□□ -0.48
GPC1-209ENST00000495100 SARGQ9BW04 601 aa12.06□□□□□ -0.48
GPC1-209ENST00000495100 SLC22A11Q9NSA0 550 aa12.06□□□□□ -0.48
GPC1-209ENST00000495100 TOR1AO14656 332 aa12.05□□□□□ -0.48
GPC1-209ENST00000495100 IL33O95760 270 aa12.05□□□□□ -0.48
GPC1-209ENST00000495100 ERCC1P07992 297 aaPredicted RBP12.05□□□□□ -0.48
GPC1-209ENST00000495100 CSF1P09603 554 aa12.05□□□□□ -0.48
GPC1-209ENST00000495100 SULT1A3P0DMM9 295 aa12.05□□□□□ -0.48
GPC1-209ENST00000495100 SULT1A4P0DMN0 295 aa12.05□□□□□ -0.48
GPC1-209ENST00000495100 CSNK2A1P68400 391 aaPredicted RBP12.05□□□□□ -0.48
GPC1-209ENST00000495100 RNF4P78317 190 aa12.05□□□□□ -0.48
GPC1-209ENST00000495100 TUSC1Q2TAM9 212 aa12.05□□□□□ -0.48
GPC1-209ENST00000495100 CSNK2A3Q8NEV1 391 aa12.05□□□□□ -0.48
GPC1-209ENST00000495100 CCDC107Q8WV48 283 aa12.05□□□□□ -0.48
GPC1-209ENST00000495100 C11orf40Q8WZ69 217 aa12.05□□□□□ -0.48
GPC1-209ENST00000495100 SLAMF6Q96DU3 332 aa12.05□□□□□ -0.48
GPC1-209ENST00000495100 ZC3HAV1LQ96H79 300 aaKnown RBP12.05□□□□□ -0.48
GPC1-209ENST00000495100 OR8B4Q96RC9 309 aa12.05□□□□□ -0.48
GPC1-209ENST00000495100 FBRSQ9HAH7 460 aa12.05□□□□□ -0.48
GPC1-209ENST00000495100 B3GNT2Q9NY97 397 aa12.05□□□□□ -0.48
GPC1-209ENST00000495100 ASPMQ8IZT6 3477 aa12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms