RNA–Protein interactions for RNA: ENST00000488087.1

ECHDC1-217, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 3

Gene ECHDC1, Length 473 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-217ENST00000488087 PON3Q15166 354 aa2.98□□□□□ -1.93
ECHDC1-217ENST00000488087 ZMYND11Q15326 602 aa2.98□□□□□ -1.93
ECHDC1-217ENST00000488087 TPSAB1Q15661 275 aa2.98□□□□□ -1.93
ECHDC1-217ENST00000488087 ZNF699Q32M78 642 aa2.98□□□□□ -1.93
ECHDC1-217ENST00000488087 GLYR1Q49A26 553 aaPredicted RBP2.98□□□□□ -1.93
ECHDC1-217ENST00000488087 SBK1Q52WX2 424 aa2.98□□□□□ -1.93
ECHDC1-217ENST00000488087 FBXO48Q5FWF7 155 aa2.98□□□□□ -1.93
ECHDC1-217ENST00000488087 TFDP3Q5H9I0 405 aa2.98□□□□□ -1.93
ECHDC1-217ENST00000488087 ACER2Q5QJU3 275 aa2.98□□□□□ -1.93
ECHDC1-217ENST00000488087 CELF3Q5SZQ8 465 aaKnown RBP2.98□□□□□ -1.93
ECHDC1-217ENST00000488087 LINC00242Q5T6M2 205 aa2.98□□□□□ -1.93
ECHDC1-217ENST00000488087 N4BP2L1Q5TBK1 243 aaPredicted RBP2.98□□□□□ -1.93
ECHDC1-217ENST00000488087 LIN9Q5TKA1 542 aa2.98□□□□□ -1.93
ECHDC1-217ENST00000488087 RNLSQ5VYX0 342 aa2.98□□□□□ -1.93
ECHDC1-217ENST00000488087 ANKRD22Q5VYY1 191 aa2.98□□□□□ -1.93
ECHDC1-217ENST00000488087 TMEM236Q5W0B7 351 aa2.98□□□□□ -1.93
ECHDC1-217ENST00000488087 NCR3LG1Q68D85 454 aa2.98□□□□□ -1.93
ECHDC1-217ENST00000488087 TMEM107Q6UX40 140 aa2.98□□□□□ -1.93
ECHDC1-217ENST00000488087 RTL4Q6ZR62 310 aa2.98□□□□□ -1.93
ECHDC1-217ENST00000488087 COPS6Q7L5N1 327 aa2.98□□□□□ -1.93
ECHDC1-217ENST00000488087 SNX20Q7Z614 316 aa2.98□□□□□ -1.93
ECHDC1-217ENST00000488087 TSEN54Q7Z6J9 526 aaKnown RBP2.98□□□□□ -1.93
ECHDC1-217ENST00000488087 SERINC5Q86VE9 423 aa2.98□□□□□ -1.93
ECHDC1-217ENST00000488087 COMTD1Q86VU5 262 aa2.98□□□□□ -1.93
ECHDC1-217ENST00000488087 PHF13Q86YI8 300 aaPredicted RBP2.98□□□□□ -1.93
ECHDC1-217ENST00000488087 MARCH9Q86YJ5 346 aa2.98□□□□□ -1.93
ECHDC1-217ENST00000488087 SLC22A9Q8IVM8 553 aa2.98□□□□□ -1.93
ECHDC1-217ENST00000488087 ZDHHC21Q8IVQ6 265 aa2.98□□□□□ -1.93
ECHDC1-217ENST00000488087 MISPQ8IVT2 679 aa2.98□□□□□ -1.93
ECHDC1-217ENST00000488087 C10orf107Q8IVU9 208 aa2.98□□□□□ -1.93
ECHDC1-217ENST00000488087 NAXDQ8IW45 347 aa2.98□□□□□ -1.93
ECHDC1-217ENST00000488087 OFCC1Q8IZS5 231 aa2.98□□□□□ -1.93
ECHDC1-217ENST00000488087 CENPLQ8N0S6 344 aaPredicted RBP2.98□□□□□ -1.93
ECHDC1-217ENST00000488087 SLC22A18ASQ8N1D0 253 aa2.98□□□□□ -1.93
ECHDC1-217ENST00000488087 ITFG1Q8TB96 612 aa2.98□□□□□ -1.93
ECHDC1-217ENST00000488087 TBCKQ8TEA7 893 aa2.98□□□□□ -1.93
ECHDC1-217ENST00000488087 SFT2D1Q8WV19 159 aa2.98□□□□□ -1.93
ECHDC1-217ENST00000488087 ASZ1Q8WWH4 475 aa2.98□□□□□ -1.93
ECHDC1-217ENST00000488087 DLX4Q92988 240 aaPredicted RBP2.98□□□□□ -1.93
ECHDC1-217ENST00000488087 LHX4Q969G2 390 aa2.98□□□□□ -1.93
ECHDC1-217ENST00000488087 NT5C3BQ969T7 300 aa2.98□□□□□ -1.93
ECHDC1-217ENST00000488087 MCHR2Q969V1 340 aa2.98□□□□□ -1.93
ECHDC1-217ENST00000488087 CREB3L1Q96BA8 519 aa2.98□□□□□ -1.93
ECHDC1-217ENST00000488087 ZBED6CLQ96FA7 236 aaPredicted RBP2.98□□□□□ -1.93
ECHDC1-217ENST00000488087 C4orf36Q96KX1 117 aa2.98□□□□□ -1.93
ECHDC1-217ENST00000488087 RBP7Q96R05 134 aa2.98□□□□□ -1.93
ECHDC1-217ENST00000488087 MBOAT4Q96T53 435 aa2.98□□□□□ -1.93
ECHDC1-217ENST00000488087 PLIN2Q99541 437 aa2.98□□□□□ -1.93
ECHDC1-217ENST00000488087 C2orf88Q9BSF0 95 aa2.98□□□□□ -1.93
ECHDC1-217ENST00000488087 APOOQ9BUR5 198 aa2.98□□□□□ -1.93
ECHDC1-217ENST00000488087 MRPL13Q9BYD1 178 aaKnown RBP2.98□□□□□ -1.93
ECHDC1-217ENST00000488087 NFKBIZQ9BYH8 718 aa2.98□□□□□ -1.93
ECHDC1-217ENST00000488087 ZNF436Q9C0F3 470 aaPredicted RBP2.98□□□□□ -1.93
ECHDC1-217ENST00000488087 ALG9Q9H6U8 611 aa2.98□□□□□ -1.93
ECHDC1-217ENST00000488087 C19orf12Q9NSK7 152 aa2.98□□□□□ -1.93
ECHDC1-217ENST00000488087 RBFOX1Q9NWB1 397 aaKnown RBP2.98□□□□□ -1.93
ECHDC1-217ENST00000488087 SDHAF2Q9NX18 166 aa2.98□□□□□ -1.93
ECHDC1-217ENST00000488087 RDH8Q9NYR8 311 aa2.98□□□□□ -1.93
ECHDC1-217ENST00000488087 TREM2Q9NZC2 230 aa2.98□□□□□ -1.93
ECHDC1-217ENST00000488087 KLRF1Q9NZS2 232 aa2.98□□□□□ -1.93
ECHDC1-217ENST00000488087 COPZ2Q9P299 210 aa2.98□□□□□ -1.93
ECHDC1-217ENST00000488087 DUX4Q9UBX2 424 aa2.98□□□□□ -1.93
ECHDC1-217ENST00000488087 ZNF107Q9UII5 783 aaPredicted RBP2.98□□□□□ -1.93
ECHDC1-217ENST00000488087 C3orf18Q9UK00 162 aa2.98□□□□□ -1.93
ECHDC1-217ENST00000488087 ABCG2Q9UNQ0 655 aa2.98□□□□□ -1.93
ECHDC1-217ENST00000488087 NPTNQ9Y639 398 aa2.98□□□□□ -1.93
ECHDC1-217ENST00000488087 SLC22A7Q9Y694 548 aa2.98□□□□□ -1.93
ECHDC1-217ENST00000488087 V9GYH0 126 aa2.98□□□□□ -1.93
ECHDC1-217ENST00000488087 NUP188Q5SRE5 1749 aa2.98□□□□□ -1.93
ECHDC1-217ENST00000488087 ABCA7Q8IZY2 2146 aa2.98□□□□□ -1.93
ECHDC1-217ENST00000488087 GLYATL1P3A0A0U1RQE8 302 aa2.97□□□□□ -1.93
ECHDC1-217ENST00000488087 LOC100130705A0A1B0GUX0 176 aa2.97□□□□□ -1.93
ECHDC1-217ENST00000488087 CIB4A0PJX0 185 aa2.97□□□□□ -1.93
ECHDC1-217ENST00000488087 GSAPA4D1B5 854 aa2.97□□□□□ -1.93
ECHDC1-217ENST00000488087 RAB19A4D1S5 217 aa2.97□□□□□ -1.93
ECHDC1-217ENST00000488087 ANKRD30BLA7E2S9 258 aa2.97□□□□□ -1.93
ECHDC1-217ENST00000488087 WASHC1A8K0Z3 465 aa2.97□□□□□ -1.93
ECHDC1-217ENST00000488087 A8MUA0 341 aa2.97□□□□□ -1.93
ECHDC1-217ENST00000488087 APOC4-APOC2K7ER74 178 aa2.97□□□□□ -1.93
ECHDC1-217ENST00000488087 L7N2F9 121 aa2.97□□□□□ -1.93
ECHDC1-217ENST00000488087 SDHDO14521 159 aa2.97□□□□□ -1.93
ECHDC1-217ENST00000488087 MRASO14807 208 aa2.97□□□□□ -1.93
ECHDC1-217ENST00000488087 NUPL2O15504 423 aaKnown RBP2.97□□□□□ -1.93
ECHDC1-217ENST00000488087 SGCEO43556 437 aa2.97□□□□□ -1.93
ECHDC1-217ENST00000488087 SRPX2O60687 465 aaPredicted RBP2.97□□□□□ -1.93
ECHDC1-217ENST00000488087 ZNF253O75346 499 aa2.97□□□□□ -1.93
ECHDC1-217ENST00000488087 CTAG2O75638 210 aa2.97□□□□□ -1.93
ECHDC1-217ENST00000488087 RHBDL1O75783 438 aa2.97□□□□□ -1.93
ECHDC1-217ENST00000488087 SC5DO75845 299 aa2.97□□□□□ -1.93
ECHDC1-217ENST00000488087 PIGRP01833 764 aa2.97□□□□□ -1.93
ECHDC1-217ENST00000488087 IGHG3P01860 377 aa2.97□□□□□ -1.93
ECHDC1-217ENST00000488087 APOC2P02655 101 aa2.97□□□□□ -1.93
ECHDC1-217ENST00000488087 CBR1P16152 277 aa2.97□□□□□ -1.93
ECHDC1-217ENST00000488087 WARSP23381 471 aaKnown RBP2.97□□□□□ -1.93
ECHDC1-217ENST00000488087 RPS3P23396 243 aaKnown RBP eCLIP2.97□□□□□ -1.93
ECHDC1-217ENST00000488087 ATP5A1P25705 553 aaKnown RBP2.97□□□□□ -1.93
ECHDC1-217ENST00000488087 LAP3P28838 519 aa2.97□□□□□ -1.93
ECHDC1-217ENST00000488087 CA5AP35218 305 aa2.97□□□□□ -1.93
ECHDC1-217ENST00000488087 CD79BP40259 229 aa2.97□□□□□ -1.93
ECHDC1-217ENST00000488087 PMELP40967 661 aa2.97□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 76.9 ms