RNA–Protein interactions for RNA: ENST00000474025.1

SNRNP40-204, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 3

Gene SNRNP40, Length 581 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-204ENST00000474025 PRB2P02812 416 aaPredicted RBP4.25□□□□□ -1.73
SNRNP40-204ENST00000474025 MT-ND1P03886 318 aa4.25□□□□□ -1.73
SNRNP40-204ENST00000474025 OPN1SWP03999 348 aa4.25□□□□□ -1.73
SNRNP40-204ENST00000474025 OPN1MWP04001 364 aa4.25□□□□□ -1.73
SNRNP40-204ENST00000474025 SCG5P05408 212 aa4.25□□□□□ -1.73
SNRNP40-204ENST00000474025 CSF1P09603 554 aa4.25□□□□□ -1.73
SNRNP40-204ENST00000474025 OPN1MW2P0DN77 364 aa4.25□□□□□ -1.73
SNRNP40-204ENST00000474025 OPN1MW3P0DN78 364 aa4.25□□□□□ -1.73
SNRNP40-204ENST00000474025 COX5BP10606 129 aa4.25□□□□□ -1.73
SNRNP40-204ENST00000474025 NR2C1P13056 603 aa4.25□□□□□ -1.73
SNRNP40-204ENST00000474025 GPX2P18283 190 aa4.25□□□□□ -1.73
SNRNP40-204ENST00000474025 CD247P20963 164 aa4.25□□□□□ -1.73
SNRNP40-204ENST00000474025 TUBG1P23258 451 aa4.25□□□□□ -1.73
SNRNP40-204ENST00000474025 NOS3P29474 1203 aa4.25□□□□□ -1.73
SNRNP40-204ENST00000474025 CFHR2P36980 270 aa4.25□□□□□ -1.73
SNRNP40-204ENST00000474025 PMELP40967 661 aa4.25□□□□□ -1.73
SNRNP40-204ENST00000474025 HTR5AP47898 357 aa4.25□□□□□ -1.73
SNRNP40-204ENST00000474025 MRPL19P49406 292 aaKnown RBP4.25□□□□□ -1.73
SNRNP40-204ENST00000474025 PCBD1P61457 104 aa4.25□□□□□ -1.73
SNRNP40-204ENST00000474025 GUCY1A3Q02108 690 aa4.25□□□□□ -1.73
SNRNP40-204ENST00000474025 ZNF181Q2M3W8 571 aa4.25□□□□□ -1.73
SNRNP40-204ENST00000474025 KRT71Q3SY84 523 aa4.25□□□□□ -1.73
SNRNP40-204ENST00000474025 RUNDC3AQ59EK9 446 aa4.25□□□□□ -1.73
SNRNP40-204ENST00000474025 TTMPQ5BVD1 217 aa4.25□□□□□ -1.73
SNRNP40-204ENST00000474025 PAGE3Q5JUK9 113 aa4.25□□□□□ -1.73
SNRNP40-204ENST00000474025 FAM201AQ5SY85 155 aa4.25□□□□□ -1.73
SNRNP40-204ENST00000474025 ARL9Q6T311 187 aa4.25□□□□□ -1.73
SNRNP40-204ENST00000474025 LYPD2Q6UXB3 125 aa4.25□□□□□ -1.73
SNRNP40-204ENST00000474025 DCDC5Q6ZRR9 648 aa4.25□□□□□ -1.73
SNRNP40-204ENST00000474025 Q6ZSV7 163 aa4.25□□□□□ -1.73
SNRNP40-204ENST00000474025 MOGAT3Q86VF5 341 aa4.25□□□□□ -1.73
SNRNP40-204ENST00000474025 PTOV1Q86YD1 416 aa4.25□□□□□ -1.73
SNRNP40-204ENST00000474025 LDLRAD3Q86YD5 345 aa4.25□□□□□ -1.73
SNRNP40-204ENST00000474025 FUNDC1Q8IVP5 155 aa4.25□□□□□ -1.73
SNRNP40-204ENST00000474025 OR5AS1Q8N127 324 aa4.25□□□□□ -1.73
SNRNP40-204ENST00000474025 CLDN22Q8N7P3 220 aa4.25□□□□□ -1.73
SNRNP40-204ENST00000474025 C11orf65Q8NCR3 313 aa4.25□□□□□ -1.73
SNRNP40-204ENST00000474025 PFN4Q8NHR9 129 aa4.25□□□□□ -1.73
SNRNP40-204ENST00000474025 TBC1D15Q8TC07 691 aa4.25□□□□□ -1.73
SNRNP40-204ENST00000474025 AENQ8WTP8 325 aaKnown RBP4.25□□□□□ -1.73
SNRNP40-204ENST00000474025 LIPHQ8WWY8 451 aa4.25□□□□□ -1.73
SNRNP40-204ENST00000474025 GATAD2BQ8WXI9 593 aa4.25□□□□□ -1.73
SNRNP40-204ENST00000474025 PPP1R14AQ96A00 147 aa4.25□□□□□ -1.73
SNRNP40-204ENST00000474025 CMBLQ96DG6 245 aa4.25□□□□□ -1.73
SNRNP40-204ENST00000474025 SPDL1Q96EA4 605 aa4.25□□□□□ -1.73
SNRNP40-204ENST00000474025 RHOVQ96L33 236 aa4.25□□□□□ -1.73
SNRNP40-204ENST00000474025 MAGEB18Q96M61 343 aa4.25□□□□□ -1.73
SNRNP40-204ENST00000474025 TBX15Q96SF7 602 aa4.25□□□□□ -1.73
SNRNP40-204ENST00000474025 PAIP2Q9BPZ3 127 aaKnown RBP4.25□□□□□ -1.73
SNRNP40-204ENST00000474025 CPPED1Q9BRF8 314 aaPredicted RBP4.25□□□□□ -1.73
SNRNP40-204ENST00000474025 PCGF1Q9BSM1 259 aa4.25□□□□□ -1.73
SNRNP40-204ENST00000474025 ALG12Q9BV10 488 aa4.25□□□□□ -1.73
SNRNP40-204ENST00000474025 C16orf95Q9H693 158 aa4.25□□□□□ -1.73
SNRNP40-204ENST00000474025 TUBG2Q9NRH3 451 aa4.25□□□□□ -1.73
SNRNP40-204ENST00000474025 C20orf141Q9NUB4 165 aa4.25□□□□□ -1.73
SNRNP40-204ENST00000474025 ACOXLQ9NUZ1 547 aa4.25□□□□□ -1.73
SNRNP40-204ENST00000474025 THAP1Q9NVV9 213 aa4.25□□□□□ -1.73
SNRNP40-204ENST00000474025 ANGPT4Q9Y264 503 aa4.25□□□□□ -1.73
SNRNP40-204ENST00000474025 STARD10Q9Y365 291 aa4.25□□□□□ -1.73
SNRNP40-204ENST00000474025 STAB2Q8WWQ8 2551 aa4.25□□□□□ -1.73
SNRNP40-204ENST00000474025 PLXNB1O43157 2135 aa4.24□□□□□ -1.73
SNRNP40-204ENST00000474025 IGHV1-69DA0A0B4J2H0 117 aa4.24□□□□□ -1.73
SNRNP40-204ENST00000474025 IGHV3-64DA0A0J9YX35 117 aa4.24□□□□□ -1.73
SNRNP40-204ENST00000474025 A0A0U1RQK1 487 aa4.24□□□□□ -1.73
SNRNP40-204ENST00000474025 A0A1B0GWJ7 208 aa4.24□□□□□ -1.73
SNRNP40-204ENST00000474025 A0A1W2PPL8 197 aa4.24□□□□□ -1.73
SNRNP40-204ENST00000474025 LRRC30A6NM36 301 aa4.24□□□□□ -1.73
SNRNP40-204ENST00000474025 C12orf71A8MTZ7 269 aa4.24□□□□□ -1.73
SNRNP40-204ENST00000474025 EVPLLA8MZ36 301 aa4.24□□□□□ -1.73
SNRNP40-204ENST00000474025 ZNF879B4DU55 563 aa4.24□□□□□ -1.73
SNRNP40-204ENST00000474025 F5H5P2 479 aa4.24□□□□□ -1.73
SNRNP40-204ENST00000474025 M0QX08 132 aa4.24□□□□□ -1.73
SNRNP40-204ENST00000474025 EREGO14944 169 aa4.24□□□□□ -1.73
SNRNP40-204ENST00000474025 MLNRO43193 412 aa4.24□□□□□ -1.73
SNRNP40-204ENST00000474025 DOK2O60496 412 aa4.24□□□□□ -1.73
SNRNP40-204ENST00000474025 TSPAN9O75954 239 aa4.24□□□□□ -1.73
SNRNP40-204ENST00000474025 TOX4O94842 621 aa4.24□□□□□ -1.73
SNRNP40-204ENST00000474025 IGHV1-69P01742 117 aa4.24□□□□□ -1.73
SNRNP40-204ENST00000474025 RAC2P15153 192 aa4.24□□□□□ -1.73
SNRNP40-204ENST00000474025 FUT1P19526 365 aa4.24□□□□□ -1.73
SNRNP40-204ENST00000474025 MSR1P21757 451 aa4.24□□□□□ -1.73
SNRNP40-204ENST00000474025 PSMB10P40306 273 aa4.24□□□□□ -1.73
SNRNP40-204ENST00000474025 RBM34P42696 430 aaKnown RBP4.24□□□□□ -1.73
SNRNP40-204ENST00000474025 IER3P46695 156 aa4.24□□□□□ -1.73
SNRNP40-204ENST00000474025 SRP9P49458 86 aaKnown RBP4.24□□□□□ -1.73
SNRNP40-204ENST00000474025 CRYBA2P53672 197 aa4.24□□□□□ -1.73
SNRNP40-204ENST00000474025 LOXL3P58215 753 aa4.24□□□□□ -1.73
SNRNP40-204ENST00000474025 HOXA4Q00056 320 aaPredicted RBP4.24□□□□□ -1.73
SNRNP40-204ENST00000474025 EGR3Q06889 387 aa4.24□□□□□ -1.73
SNRNP40-204ENST00000474025 SCRN3Q0VDG4 424 aa4.24□□□□□ -1.73
SNRNP40-204ENST00000474025 TOP3AQ13472 1001 aaPredicted RBP4.24□□□□□ -1.73
SNRNP40-204ENST00000474025 FAM189A2Q15884 450 aa4.24□□□□□ -1.73
SNRNP40-204ENST00000474025 ALG10Q5BKT4 473 aa4.24□□□□□ -1.73
SNRNP40-204ENST00000474025 TNFAIP8L3Q5GJ75 292 aa4.24□□□□□ -1.73
SNRNP40-204ENST00000474025 OR2T2Q6IF00 324 aa4.24□□□□□ -1.73
SNRNP40-204ENST00000474025 DLEU7Q6UYE1 221 aa4.24□□□□□ -1.73
SNRNP40-204ENST00000474025 FBXW12Q6X9E4 464 aa4.24□□□□□ -1.73
SNRNP40-204ENST00000474025 GDPGP1Q6ZNW5 385 aa4.24□□□□□ -1.73
SNRNP40-204ENST00000474025 NKAIN4Q8IVV8 208 aa4.24□□□□□ -1.73
SNRNP40-204ENST00000474025 C1orf87Q8N0U7 546 aa4.24□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 86.7 ms