RNA–Protein interactions for RNA: ENST00000455546.6

GTF3C3-208, Transcript of general transcription factor IIIC subunit 3, humanhuman

TSL 4

Gene GTF3C3, Length 547 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3-208ENST00000455546 SLC19A3Q9BZV2 496 aa3.97□□□□□ -1.77
GTF3C3-208ENST00000455546 OR2H1Q9GZK4 316 aa3.97□□□□□ -1.77
GTF3C3-208ENST00000455546 OR2J1Q9GZK6 312 aa3.97□□□□□ -1.77
GTF3C3-208ENST00000455546 C11orf54Q9H0W9 315 aaPredicted RBP3.97□□□□□ -1.77
GTF3C3-208ENST00000455546 WNT5BQ9H1J7 359 aa3.97□□□□□ -1.77
GTF3C3-208ENST00000455546 LRMDAQ9H2I8 198 aa3.97□□□□□ -1.77
GTF3C3-208ENST00000455546 TXNIPQ9H3M7 391 aa3.97□□□□□ -1.77
GTF3C3-208ENST00000455546 ZNF665Q9H7R5 613 aa3.97□□□□□ -1.77
GTF3C3-208ENST00000455546 SIAEQ9HAT2 523 aa3.97□□□□□ -1.77
GTF3C3-208ENST00000455546 MSL2Q9HCI7 577 aa3.97□□□□□ -1.77
GTF3C3-208ENST00000455546 G6PC2Q9NQR9 355 aa3.97□□□□□ -1.77
GTF3C3-208ENST00000455546 SLCO1C1Q9NYB5 712 aa3.97□□□□□ -1.77
GTF3C3-208ENST00000455546 UBAP1Q9NZ09 502 aa3.97□□□□□ -1.77
GTF3C3-208ENST00000455546 EIF3KQ9UBQ5 218 aaKnown RBP3.97□□□□□ -1.77
GTF3C3-208ENST00000455546 KLHL21Q9UJP4 597 aa3.97□□□□□ -1.77
GTF3C3-208ENST00000455546 A4GNTQ9UNA3 340 aa3.97□□□□□ -1.77
GTF3C3-208ENST00000455546 MED31Q9Y3C7 131 aa3.97□□□□□ -1.77
GTF3C3-208ENST00000455546 GRIP1Q9Y3R0 1128 aa3.97□□□□□ -1.77
GTF3C3-208ENST00000455546 MXRA5Q9NR99 2828 aa3.96□□□□□ -1.78
GTF3C3-208ENST00000455546 IGHV3-64DA0A0J9YX35 117 aa3.96□□□□□ -1.78
GTF3C3-208ENST00000455546 ISPDA4D126 451 aa3.96□□□□□ -1.78
GTF3C3-208ENST00000455546 ZSCAN5BA6NJL1 495 aa3.96□□□□□ -1.78
GTF3C3-208ENST00000455546 DBX1A6NMT0 343 aa3.96□□□□□ -1.78
GTF3C3-208ENST00000455546 HMGB1P1B2RPK0 211 aaPredicted RBP3.96□□□□□ -1.78
GTF3C3-208ENST00000455546 TRAPPC2LH3BP13 241 aa3.96□□□□□ -1.78
GTF3C3-208ENST00000455546 IMPA2O14732 288 aa3.96□□□□□ -1.78
GTF3C3-208ENST00000455546 MRASO14807 208 aa3.96□□□□□ -1.78
GTF3C3-208ENST00000455546 FFAR1O14842 300 aa3.96□□□□□ -1.78
GTF3C3-208ENST00000455546 OR5F1O95221 314 aa3.96□□□□□ -1.78
GTF3C3-208ENST00000455546 GPANK1O95872 356 aa3.96□□□□□ -1.78
GTF3C3-208ENST00000455546 PNPP00491 289 aa3.96□□□□□ -1.78
GTF3C3-208ENST00000455546 IGHV2-5P01817 119 aa3.96□□□□□ -1.78
GTF3C3-208ENST00000455546 TFP02787 698 aa3.96□□□□□ -1.78
GTF3C3-208ENST00000455546 TSPAN19P0C672 248 aa3.96□□□□□ -1.78
GTF3C3-208ENST00000455546 ANPEPP15144 967 aa3.96□□□□□ -1.78
GTF3C3-208ENST00000455546 ZNF26P17031 533 aaPredicted RBP3.96□□□□□ -1.78
GTF3C3-208ENST00000455546 EGR1P18146 543 aa3.96□□□□□ -1.78
GTF3C3-208ENST00000455546 PCMT1P22061 227 aa3.96□□□□□ -1.78
GTF3C3-208ENST00000455546 ZFP36P26651 326 aaKnown RBP3.96□□□□□ -1.78
GTF3C3-208ENST00000455546 KDELR2P33947 212 aa3.96□□□□□ -1.78
GTF3C3-208ENST00000455546 MSX2P35548 267 aaPredicted RBP3.96□□□□□ -1.78
GTF3C3-208ENST00000455546 RBM34P42696 430 aaKnown RBP3.96□□□□□ -1.78
GTF3C3-208ENST00000455546 DAP3P51398 398 aaKnown RBP3.96□□□□□ -1.78
GTF3C3-208ENST00000455546 MMP15P51511 669 aa3.96□□□□□ -1.78
GTF3C3-208ENST00000455546 ZNF133P52736 654 aaPredicted RBP3.96□□□□□ -1.78
GTF3C3-208ENST00000455546 ARFIP2P53365 341 aa3.96□□□□□ -1.78
GTF3C3-208ENST00000455546 RPL27P61353 136 aaKnown RBP3.96□□□□□ -1.78
GTF3C3-208ENST00000455546 SEC61A1P61619 476 aaKnown RBP3.96□□□□□ -1.78
GTF3C3-208ENST00000455546 PPP1CBP62140 327 aa3.96□□□□□ -1.78
GTF3C3-208ENST00000455546 ACTG1P63261 375 aa3.96□□□□□ -1.78
GTF3C3-208ENST00000455546 SELENOWP63302 87 aa3.96□□□□□ -1.78
GTF3C3-208ENST00000455546 MRPS11P82912 194 aaKnown RBP3.96□□□□□ -1.78
GTF3C3-208ENST00000455546 MRPS34P82930 218 aaKnown RBP3.96□□□□□ -1.78
GTF3C3-208ENST00000455546 ST3GAL3Q11203 375 aa3.96□□□□□ -1.78
GTF3C3-208ENST00000455546 PSG7Q13046 419 aa3.96□□□□□ -1.78
GTF3C3-208ENST00000455546 FHL1Q13642 323 aa3.96□□□□□ -1.78
GTF3C3-208ENST00000455546 ENDOGQ14249 297 aaKnown RBP3.96□□□□□ -1.78
GTF3C3-208ENST00000455546 PCGF3Q3KNV8 242 aa3.96□□□□□ -1.78
GTF3C3-208ENST00000455546 C10orf128Q5T292 105 aa3.96□□□□□ -1.78
GTF3C3-208ENST00000455546 FAM27BQ5VT28 67 aa3.96□□□□□ -1.78
GTF3C3-208ENST00000455546 METTL21CQ5VZV1 264 aa3.96□□□□□ -1.78
GTF3C3-208ENST00000455546 CGB2Q6NT52 195 aa3.96□□□□□ -1.78
GTF3C3-208ENST00000455546 C1orf94Q6P1W5 598 aa3.96□□□□□ -1.78
GTF3C3-208ENST00000455546 RFPL4BQ6ZWI9 263 aa3.96□□□□□ -1.78
GTF3C3-208ENST00000455546 DPPA2Q7Z7J5 298 aa3.96□□□□□ -1.78
GTF3C3-208ENST00000455546 NRMQ8IXM6 262 aa3.96□□□□□ -1.78
GTF3C3-208ENST00000455546 SEMA6DQ8NFY4 1073 aa3.96□□□□□ -1.78
GTF3C3-208ENST00000455546 OR8J3Q8NGG0 315 aa3.96□□□□□ -1.78
GTF3C3-208ENST00000455546 OR13C2Q8NGS9 318 aa3.96□□□□□ -1.78
GTF3C3-208ENST00000455546 IPCEF1Q8WWN9 437 aaPredicted RBP3.96□□□□□ -1.78
GTF3C3-208ENST00000455546 RASSF5Q8WWW0 418 aa3.96□□□□□ -1.78
GTF3C3-208ENST00000455546 LIPHQ8WWY8 451 aa3.96□□□□□ -1.78
GTF3C3-208ENST00000455546 SLC7A6Q92536 515 aa3.96□□□□□ -1.78
GTF3C3-208ENST00000455546 RAB1CQ92928 201 aa3.96□□□□□ -1.78
GTF3C3-208ENST00000455546 CMBLQ96DG6 245 aa3.96□□□□□ -1.78
GTF3C3-208ENST00000455546 C4orf45Q96LM5 186 aa3.96□□□□□ -1.78
GTF3C3-208ENST00000455546 Q96M85 177 aa3.96□□□□□ -1.78
GTF3C3-208ENST00000455546 DUX5Q96PT3 197 aa3.96□□□□□ -1.78
GTF3C3-208ENST00000455546 RBP7Q96R05 134 aa3.96□□□□□ -1.78
GTF3C3-208ENST00000455546 SLC6A7Q99884 636 aa3.96□□□□□ -1.78
GTF3C3-208ENST00000455546 SH3GL1Q99961 368 aa3.96□□□□□ -1.78
GTF3C3-208ENST00000455546 GAL3ST1Q99999 423 aa3.96□□□□□ -1.78
GTF3C3-208ENST00000455546 FNDC11Q9BVV2 318 aa3.96□□□□□ -1.78
GTF3C3-208ENST00000455546 ZCCHC4Q9H5U6 513 aa3.96□□□□□ -1.78
GTF3C3-208ENST00000455546 RERGLQ9H628 205 aa3.96□□□□□ -1.78
GTF3C3-208ENST00000455546 SAP30LQ9HAJ7 183 aa3.96□□□□□ -1.78
GTF3C3-208ENST00000455546 SAR1AQ9NR31 198 aa3.96□□□□□ -1.78
GTF3C3-208ENST00000455546 MMP26Q9NRE1 261 aa3.96□□□□□ -1.78
GTF3C3-208ENST00000455546 MAN2C1Q9NTJ4 1040 aa3.96□□□□□ -1.78
GTF3C3-208ENST00000455546 FGFR1OP2Q9NVK5 253 aa3.96□□□□□ -1.78
GTF3C3-208ENST00000455546 CMTM6Q9NX76 183 aa3.96□□□□□ -1.78
GTF3C3-208ENST00000455546 NKIRAS2Q9NYR9 191 aa3.96□□□□□ -1.78
GTF3C3-208ENST00000455546 ARMCX1Q9P291 453 aa3.96□□□□□ -1.78
GTF3C3-208ENST00000455546 IL20RAQ9UHF4 553 aa3.96□□□□□ -1.78
GTF3C3-208ENST00000455546 FBXL3Q9UKT7 428 aa3.96□□□□□ -1.78
GTF3C3-208ENST00000455546 BAG5Q9UL15 447 aa3.96□□□□□ -1.78
GTF3C3-208ENST00000455546 SLC45A2Q9UMX9 530 aa3.96□□□□□ -1.78
GTF3C3-208ENST00000455546 PPIAL4AQ9Y536 164 aa3.96□□□□□ -1.78
GTF3C3-208ENST00000455546 TIMM10BQ9Y5J6 103 aa3.96□□□□□ -1.78
GTF3C3-208ENST00000455546 SOX21Q9Y651 276 aaPredicted RBP3.96□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 67.3 ms