RNA–Protein interactions for RNA: ENST00000444896.1

HMGB3P6-201, Transcript of high mobility group box 3 pseudogene 6, humanhuman

BASIC

Gene HMGB3P6, Length 598 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P6-201ENST00000444896 PABPC4LP0CB38 370 aaKnown RBP3.09□□□□□ -1.91
HMGB3P6-201ENST00000444896 HMGA1P17096 107 aaKnown RBP3.09□□□□□ -1.91
HMGB3P6-201ENST00000444896 NT5EP21589 574 aa3.09□□□□□ -1.91
HMGB3P6-201ENST00000444896 CA8P35219 290 aa3.09□□□□□ -1.91
HMGB3P6-201ENST00000444896 DRD3P35462 400 aa3.09□□□□□ -1.91
HMGB3P6-201ENST00000444896 SPAM1P38567 509 aa3.09□□□□□ -1.91
HMGB3P6-201ENST00000444896 CSKP41240 450 aa3.09□□□□□ -1.91
HMGB3P6-201ENST00000444896 NSG1P42857 185 aa3.09□□□□□ -1.91
HMGB3P6-201ENST00000444896 RPL5P46777 297 aaKnown RBP3.09□□□□□ -1.91
HMGB3P6-201ENST00000444896 CSNK1DP48730 415 aa3.09□□□□□ -1.91
HMGB3P6-201ENST00000444896 KRTAP12-2P59991 146 aa3.09□□□□□ -1.91
HMGB3P6-201ENST00000444896 GNB2P62879 340 aa3.09□□□□□ -1.91
HMGB3P6-201ENST00000444896 RAB40BQ12829 278 aa3.09□□□□□ -1.91
HMGB3P6-201ENST00000444896 RCAN2Q14206 197 aa3.09□□□□□ -1.91
HMGB3P6-201ENST00000444896 CYTH1Q15438 398 aa3.09□□□□□ -1.91
HMGB3P6-201ENST00000444896 IMPG1Q17R60 797 aa3.09□□□□□ -1.91
HMGB3P6-201ENST00000444896 DEFB115Q30KQ5 88 aa3.09□□□□□ -1.91
HMGB3P6-201ENST00000444896 XKR7Q5GH72 579 aa3.09□□□□□ -1.91
HMGB3P6-201ENST00000444896 CTSL3PQ5NE16 218 aa3.09□□□□□ -1.91
HMGB3P6-201ENST00000444896 LCN8Q6JVE9 175 aa3.09□□□□□ -1.91
HMGB3P6-201ENST00000444896 TTC23LQ6PF05 361 aa3.09□□□□□ -1.91
HMGB3P6-201ENST00000444896 UGT2A3Q6UWM9 527 aa3.09□□□□□ -1.91
HMGB3P6-201ENST00000444896 RPS27LQ71UM5 84 aaKnown RBP3.09□□□□□ -1.91
HMGB3P6-201ENST00000444896 HSD17B13Q7Z5P4 300 aaPredicted RBP3.09□□□□□ -1.91
HMGB3P6-201ENST00000444896 PPP1R27Q86WC6 154 aa3.09□□□□□ -1.91
HMGB3P6-201ENST00000444896 CPNE9Q8IYJ1 553 aa3.09□□□□□ -1.91
HMGB3P6-201ENST00000444896 FAM9CQ8IZT9 166 aa3.09□□□□□ -1.91
HMGB3P6-201ENST00000444896 TCAIMQ8N3R3 496 aa3.09□□□□□ -1.91
HMGB3P6-201ENST00000444896 C15orf54Q8N8G6 183 aa3.09□□□□□ -1.91
HMGB3P6-201ENST00000444896 FNDC5Q8NAU1 212 aa3.09□□□□□ -1.91
HMGB3P6-201ENST00000444896 OR9I1Q8NGQ6 314 aa3.09□□□□□ -1.91
HMGB3P6-201ENST00000444896 ZNF461Q8TAF7 563 aa3.09□□□□□ -1.91
HMGB3P6-201ENST00000444896 OSTF1Q92882 214 aa3.09□□□□□ -1.91
HMGB3P6-201ENST00000444896 POP5Q969H6 163 aaKnown RBP3.09□□□□□ -1.91
HMGB3P6-201ENST00000444896 LRRC58Q96CX6 371 aa3.09□□□□□ -1.91
HMGB3P6-201ENST00000444896 PPP3R2Q96LZ3 170 aa3.09□□□□□ -1.91
HMGB3P6-201ENST00000444896 BIRC8Q96P09 236 aa3.09□□□□□ -1.91
HMGB3P6-201ENST00000444896 KCNA7Q96RP8 456 aa3.09□□□□□ -1.91
HMGB3P6-201ENST00000444896 SH3GL3Q99963 347 aa3.09□□□□□ -1.91
HMGB3P6-201ENST00000444896 KCTD14Q9BQ13 255 aaPredicted RBP3.09□□□□□ -1.91
HMGB3P6-201ENST00000444896 C9orf16Q9BUW7 83 aa3.09□□□□□ -1.91
HMGB3P6-201ENST00000444896 SPATA16Q9BXB7 569 aa3.09□□□□□ -1.91
HMGB3P6-201ENST00000444896 GLIPR2Q9H4G4 154 aa3.09□□□□□ -1.91
HMGB3P6-201ENST00000444896 ASB8Q9H765 288 aa3.09□□□□□ -1.91
HMGB3P6-201ENST00000444896 ARMC1Q9NVT9 282 aa3.09□□□□□ -1.91
HMGB3P6-201ENST00000444896 AIG1Q9NVV5 245 aa3.09□□□□□ -1.91
HMGB3P6-201ENST00000444896 OPTCQ9UBM4 332 aa3.09□□□□□ -1.91
HMGB3P6-201ENST00000444896 CD300AQ9UGN4 299 aa3.09□□□□□ -1.91
HMGB3P6-201ENST00000444896 PCTPQ9UKL6 214 aa3.09□□□□□ -1.91
HMGB3P6-201ENST00000444896 BTRCQ9Y297 605 aa3.09□□□□□ -1.91
HMGB3P6-201ENST00000444896 AP3M1Q9Y2T2 418 aa3.09□□□□□ -1.91
HMGB3P6-201ENST00000444896 WDR45Q9Y484 360 aa3.09□□□□□ -1.91
HMGB3P6-201ENST00000444896 MAB21L2Q9Y586 359 aa3.09□□□□□ -1.91
HMGB3P6-201ENST00000444896 DNAJC15Q9Y5T4 150 aa3.09□□□□□ -1.91
HMGB3P6-201ENST00000444896 COMMD3-BMI1R4GMX3 469 aa3.09□□□□□ -1.91
HMGB3P6-201ENST00000444896 PLXNA4Q9HCM2 1894 aa3.08□□□□□ -1.92
HMGB3P6-201ENST00000444896 TRAV19A0A0A6YYK7 116 aa3.08□□□□□ -1.92
HMGB3P6-201ENST00000444896 C1orf232A0A0U1RR37 186 aa3.08□□□□□ -1.92
HMGB3P6-201ENST00000444896 A0A1B0GWJ7 208 aa3.08□□□□□ -1.92
HMGB3P6-201ENST00000444896 PANO1I0J062 215 aa3.08□□□□□ -1.92
HMGB3P6-201ENST00000444896 NME4O00746 187 aa3.08□□□□□ -1.92
HMGB3P6-201ENST00000444896 OR1I1O60431 355 aa3.08□□□□□ -1.92
HMGB3P6-201ENST00000444896 TSPAN12O95859 305 aa3.08□□□□□ -1.92
HMGB3P6-201ENST00000444896 TRBC1P01850 177 aa3.08□□□□□ -1.92
HMGB3P6-201ENST00000444896 KRT6AP02538 564 aa3.08□□□□□ -1.92
HMGB3P6-201ENST00000444896 ANXA5P08758 320 aa3.08□□□□□ -1.92
HMGB3P6-201ENST00000444896 OR56A5P0C7T3 313 aa3.08□□□□□ -1.92
HMGB3P6-201ENST00000444896 PGCP20142 388 aa3.08□□□□□ -1.92
HMGB3P6-201ENST00000444896 ATP6V1B2P21281 511 aa3.08□□□□□ -1.92
HMGB3P6-201ENST00000444896 TBXA2RP21731 343 aa3.08□□□□□ -1.92
HMGB3P6-201ENST00000444896 GABRR2P28476 465 aa3.08□□□□□ -1.92
HMGB3P6-201ENST00000444896 CCNHP51946 323 aaPredicted RBP3.08□□□□□ -1.92
HMGB3P6-201ENST00000444896 POLR2JP52435 117 aaKnown RBP3.08□□□□□ -1.92
HMGB3P6-201ENST00000444896 FOXA1P55317 472 aa3.08□□□□□ -1.92
HMGB3P6-201ENST00000444896 CCL23P55773 120 aa3.08□□□□□ -1.92
HMGB3P6-201ENST00000444896 RPL38P63173 70 aaKnown RBP3.08□□□□□ -1.92
HMGB3P6-201ENST00000444896 ZNF45Q02386 682 aa3.08□□□□□ -1.92
HMGB3P6-201ENST00000444896 EMX2Q04743 252 aa3.08□□□□□ -1.92
HMGB3P6-201ENST00000444896 GRB7Q14451 532 aa3.08□□□□□ -1.92
HMGB3P6-201ENST00000444896 IHHQ14623 411 aa3.08□□□□□ -1.92
HMGB3P6-201ENST00000444896 TGFBIQ15582 683 aa3.08□□□□□ -1.92
HMGB3P6-201ENST00000444896 NRF1Q16656 503 aa3.08□□□□□ -1.92
HMGB3P6-201ENST00000444896 VPS26BQ4G0F5 336 aa3.08□□□□□ -1.92
HMGB3P6-201ENST00000444896 OTPQ5XKR4 325 aa3.08□□□□□ -1.92
HMGB3P6-201ENST00000444896 FAM151BQ6UXP7 276 aa3.08□□□□□ -1.92
HMGB3P6-201ENST00000444896 IL34Q6ZMJ4 242 aa3.08□□□□□ -1.92
HMGB3P6-201ENST00000444896 CYHR1Q6ZMK1 362 aa3.08□□□□□ -1.92
HMGB3P6-201ENST00000444896 RNF165Q6ZSG1 346 aa3.08□□□□□ -1.92
HMGB3P6-201ENST00000444896 TPGS1Q6ZTW0 290 aa3.08□□□□□ -1.92
HMGB3P6-201ENST00000444896 DEFB128Q7Z7B8 93 aa3.08□□□□□ -1.92
HMGB3P6-201ENST00000444896 FUNDC1Q8IVP5 155 aa3.08□□□□□ -1.92
HMGB3P6-201ENST00000444896 SKA3Q8IX90 412 aa3.08□□□□□ -1.92
HMGB3P6-201ENST00000444896 PIANPQ8IYJ0 282 aa3.08□□□□□ -1.92
HMGB3P6-201ENST00000444896 TBC1D21Q8IYX1 336 aa3.08□□□□□ -1.92
HMGB3P6-201ENST00000444896 ANKFN1Q8N957 763 aa3.08□□□□□ -1.92
HMGB3P6-201ENST00000444896 SNX31Q8N9S9 440 aa3.08□□□□□ -1.92
HMGB3P6-201ENST00000444896 DENND6BQ8NEG7 585 aa3.08□□□□□ -1.92
HMGB3P6-201ENST00000444896 BBS1Q8NFJ9 593 aa3.08□□□□□ -1.92
HMGB3P6-201ENST00000444896 NAT14Q8WUY8 206 aa3.08□□□□□ -1.92
HMGB3P6-201ENST00000444896 EEF1AKMT1Q8WVE0 214 aa3.08□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 60.2 ms