RNA–Protein interactions for RNA: ENST00000412686.5

CPSF4-202, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 5

Gene CPSF4, Length 745 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-202ENST00000412686 UBE2FQ969M7 185 aa6.62□□□□□ -1.35
CPSF4-202ENST00000412686 C4orf45Q96LM5 186 aa6.62□□□□□ -1.35
CPSF4-202ENST00000412686 INTS14Q96SY0 518 aa6.62□□□□□ -1.35
CPSF4-202ENST00000412686 PITX2Q99697 317 aa6.62□□□□□ -1.35
CPSF4-202ENST00000412686 VRK1Q99986 396 aaPredicted RBP6.62□□□□□ -1.35
CPSF4-202ENST00000412686 WACQ9BTA9 647 aa6.62□□□□□ -1.35
CPSF4-202ENST00000412686 C9orf16Q9BUW7 83 aa6.62□□□□□ -1.35
CPSF4-202ENST00000412686 CDADC1Q9BWV3 514 aa6.62□□□□□ -1.35
CPSF4-202ENST00000412686 TTTY10Q9BZA0 68 aa6.62□□□□□ -1.35
CPSF4-202ENST00000412686 OR2J1Q9GZK6 312 aa6.62□□□□□ -1.35
CPSF4-202ENST00000412686 TPK1Q9H3S4 243 aa6.62□□□□□ -1.35
CPSF4-202ENST00000412686 AASSQ9UDR5 926 aa6.62□□□□□ -1.35
CPSF4-202ENST00000412686 DUSP13Q9UII6 198 aa6.62□□□□□ -1.35
CPSF4-202ENST00000412686 NDRG4Q9ULP0 352 aaKnown RBP6.62□□□□□ -1.35
CPSF4-202ENST00000412686 KLHDC2Q9Y2U9 406 aa6.62□□□□□ -1.35
CPSF4-202ENST00000412686 GRIP1Q9Y3R0 1128 aa6.62□□□□□ -1.35
CPSF4-202ENST00000412686 CMAHPQ9Y471 501 aa6.62□□□□□ -1.35
CPSF4-202ENST00000412686 SPEF1Q9Y4P9 236 aa6.62□□□□□ -1.35
CPSF4-202ENST00000412686 RTTNQ86VV8 2226 aa6.62□□□□□ -1.35
CPSF4-202ENST00000412686 SPG11Q96JI7 2443 aa6.61□□□□□ -1.35
CPSF4-202ENST00000412686 PLCE1Q9P212 2302 aa6.61□□□□□ -1.35
CPSF4-202ENST00000412686 USF3Q68DE3 2245 aa6.61□□□□□ -1.35
CPSF4-202ENST00000412686 ANKRD17O75179 2603 aaKnown RBP6.61□□□□□ -1.35
CPSF4-202ENST00000412686 A0A1W2PPW3 197 aa6.61□□□□□ -1.35
CPSF4-202ENST00000412686 TRIM64A6NGJ6 449 aa6.61□□□□□ -1.35
CPSF4-202ENST00000412686 TRIM64BA6NI03 449 aa6.61□□□□□ -1.35
CPSF4-202ENST00000412686 B9A039 149 aa6.61□□□□□ -1.35
CPSF4-202ENST00000412686 E9PQ18 207 aa6.61□□□□□ -1.35
CPSF4-202ENST00000412686 F5H5K5 113 aa6.61□□□□□ -1.35
CPSF4-202ENST00000412686 LCE2BO14633 110 aa6.61□□□□□ -1.35
CPSF4-202ENST00000412686 SSX4O60224 188 aa6.61□□□□□ -1.35
CPSF4-202ENST00000412686 APOL3O95236 402 aa6.61□□□□□ -1.35
CPSF4-202ENST00000412686 AVPP01185 164 aa6.61□□□□□ -1.35
CPSF4-202ENST00000412686 ADRA2AP08913 450 aa6.61□□□□□ -1.35
CPSF4-202ENST00000412686 ACSM4P0C7M7 580 aa6.61□□□□□ -1.35
CPSF4-202ENST00000412686 SLC2A1P11166 492 aa6.61□□□□□ -1.35
CPSF4-202ENST00000412686 NAT2P11245 290 aa6.61□□□□□ -1.35
CPSF4-202ENST00000412686 PEX2P28328 305 aa6.61□□□□□ -1.35
CPSF4-202ENST00000412686 PCSK6P29122 969 aa6.61□□□□□ -1.35
CPSF4-202ENST00000412686 RAD52P43351 418 aa6.61□□□□□ -1.35
CPSF4-202ENST00000412686 PPP1CBP62140 327 aa6.61□□□□□ -1.35
CPSF4-202ENST00000412686 ELF3P78545 371 aaPredicted RBP6.61□□□□□ -1.35
CPSF4-202ENST00000412686 EIF2B1Q14232 305 aaKnown RBP6.61□□□□□ -1.35
CPSF4-202ENST00000412686 PCK2Q16822 640 aa6.61□□□□□ -1.35
CPSF4-202ENST00000412686 KRTAP27-1Q3LI81 207 aa6.61□□□□□ -1.35
CPSF4-202ENST00000412686 AADACL4Q5VUY2 407 aa6.61□□□□□ -1.35
CPSF4-202ENST00000412686 ZBTB49Q6ZSB9 765 aa6.61□□□□□ -1.35
CPSF4-202ENST00000412686 C10orf67Q8IYJ2 551 aa6.61□□□□□ -1.35
CPSF4-202ENST00000412686 LRRC75A-AS1Q8N1F1 130 aa6.61□□□□□ -1.35
CPSF4-202ENST00000412686 CIARTQ8N365 385 aaPredicted RBP6.61□□□□□ -1.35
CPSF4-202ENST00000412686 RFLNBQ8N5W9 214 aa6.61□□□□□ -1.35
CPSF4-202ENST00000412686 FAM81AQ8TBF8 368 aa6.61□□□□□ -1.35
CPSF4-202ENST00000412686 TMEM163Q8TC26 289 aa6.61□□□□□ -1.35
CPSF4-202ENST00000412686 ST7LQ8TDW4 575 aa6.61□□□□□ -1.35
CPSF4-202ENST00000412686 IPCEF1Q8WWN9 437 aaPredicted RBP6.61□□□□□ -1.35
CPSF4-202ENST00000412686 EME1Q96AY2 570 aa6.61□□□□□ -1.35
CPSF4-202ENST00000412686 SLAMF6Q96DU3 332 aa6.61□□□□□ -1.35
CPSF4-202ENST00000412686 MARS2Q96GW9 593 aaKnown RBP6.61□□□□□ -1.35
CPSF4-202ENST00000412686 Q96MF0 132 aa6.61□□□□□ -1.35
CPSF4-202ENST00000412686 COQ7Q99807 217 aa6.61□□□□□ -1.35
CPSF4-202ENST00000412686 ATF6BQ99941 703 aa6.61□□□□□ -1.35
CPSF4-202ENST00000412686 ABHD6Q9BV23 337 aa6.61□□□□□ -1.35
CPSF4-202ENST00000412686 TEX12Q9BXU0 123 aa6.61□□□□□ -1.35
CPSF4-202ENST00000412686 BCL2L14Q9BZR8 327 aa6.61□□□□□ -1.35
CPSF4-202ENST00000412686 HDHD2Q9H0R4 259 aa6.61□□□□□ -1.35
CPSF4-202ENST00000412686 TOR3AQ9H497 397 aa6.61□□□□□ -1.35
CPSF4-202ENST00000412686 MARCH7Q9H992 704 aa6.61□□□□□ -1.35
CPSF4-202ENST00000412686 DYNLRB1Q9NP97 96 aa6.61□□□□□ -1.35
CPSF4-202ENST00000412686 CENPMQ9NSP4 180 aa6.61□□□□□ -1.35
CPSF4-202ENST00000412686 PTTG3PQ9NZH4 202 aa6.61□□□□□ -1.35
CPSF4-202ENST00000412686 DNAJC27Q9NZQ0 273 aa6.61□□□□□ -1.35
CPSF4-202ENST00000412686 TAAR3PQ9P1P4 343 aa6.61□□□□□ -1.35
CPSF4-202ENST00000412686 EIF3KQ9UBQ5 218 aaKnown RBP6.61□□□□□ -1.35
CPSF4-202ENST00000412686 COPS3Q9UNS2 423 aa6.61□□□□□ -1.35
CPSF4-202ENST00000412686 STARD10Q9Y365 291 aa6.61□□□□□ -1.35
CPSF4-202ENST00000412686 CENPEQ02224 2701 aa6.61□□□□□ -1.35
CPSF4-202ENST00000412686 IGLV3-9A0A075B6K5 115 aa6.6□□□□□ -1.35
CPSF4-202ENST00000412686 PRR32B1ATL7 298 aa6.6□□□□□ -1.35
CPSF4-202ENST00000412686 H7C417 338 aa6.6□□□□□ -1.35
CPSF4-202ENST00000412686 M0R233 179 aa6.6□□□□□ -1.35
CPSF4-202ENST00000412686 PSMD9O00233 223 aa6.6□□□□□ -1.35
CPSF4-202ENST00000412686 DLGAP1O14490 977 aa6.6□□□□□ -1.35
CPSF4-202ENST00000412686 PRODHO43272 600 aa6.6□□□□□ -1.35
CPSF4-202ENST00000412686 ICMTO60725 284 aa6.6□□□□□ -1.35
CPSF4-202ENST00000412686 ZNF250P15622 560 aa6.6□□□□□ -1.35
CPSF4-202ENST00000412686 RBMXP38159 391 aaKnown RBP6.6□□□□□ -1.35
CPSF4-202ENST00000412686 PPOXP50336 477 aa6.6□□□□□ -1.35
CPSF4-202ENST00000412686 PRKXP51817 358 aa6.6□□□□□ -1.35
CPSF4-202ENST00000412686 BLVRAP53004 296 aa6.6□□□□□ -1.35
CPSF4-202ENST00000412686 NUDT6P53370 316 aa6.6□□□□□ -1.35
CPSF4-202ENST00000412686 RAD23AP54725 363 aa6.6□□□□□ -1.35
CPSF4-202ENST00000412686 RPS23P62266 143 aaKnown RBP6.6□□□□□ -1.35
CPSF4-202ENST00000412686 HLXQ14774 488 aaPredicted RBP6.6□□□□□ -1.35
CPSF4-202ENST00000412686 TRIP10Q15642 601 aa6.6□□□□□ -1.35
CPSF4-202ENST00000412686 CLEC12BQ2HXU8 276 aa6.6□□□□□ -1.35
CPSF4-202ENST00000412686 SNAI3Q3KNW1 292 aa6.6□□□□□ -1.35
CPSF4-202ENST00000412686 TEX30Q5JUR7 227 aa6.6□□□□□ -1.35
CPSF4-202ENST00000412686 SLC35D3Q5M8T2 416 aa6.6□□□□□ -1.35
CPSF4-202ENST00000412686 SHEQ5VZ18 495 aa6.6□□□□□ -1.35
CPSF4-202ENST00000412686 SPNS3Q6ZMD2 512 aa6.6□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms