RNA–Protein interactions for RNA: ENST00000396345.1

HOXA9-202, Transcript of homeobox A9, humanhuman

TSL 2 BASIC

Gene HOXA9, Length 797 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA9-202ENST00000396345 UNQ6126/PRO20091Q6UXV3 157 aa16.54■□□□□ 0.24
HOXA9-202ENST00000396345 ZNF101Q8IZC7 436 aa16.54■□□□□ 0.24
HOXA9-202ENST00000396345 DHRSXQ8N5I4 330 aa16.54■□□□□ 0.24
HOXA9-202ENST00000396345 ZNF454Q8N9F8 522 aa16.54■□□□□ 0.24
HOXA9-202ENST00000396345 OTOSQ8NHW6 89 aa16.54■□□□□ 0.24
HOXA9-202ENST00000396345 IGFBPL1Q8WX77 278 aa16.54■□□□□ 0.24
HOXA9-202ENST00000396345 RFKQ969G6 155 aa16.54■□□□□ 0.24
HOXA9-202ENST00000396345 CNN2Q99439 309 aaKnown RBP16.54■□□□□ 0.24
HOXA9-202ENST00000396345 TRAF4Q9BUZ4 470 aaPredicted RBP16.54■□□□□ 0.24
HOXA9-202ENST00000396345 ABHD6Q9BV23 337 aa16.54■□□□□ 0.24
HOXA9-202ENST00000396345 YIPF3Q9GZM5 350 aa16.54■□□□□ 0.24
HOXA9-202ENST00000396345 CENPMQ9NSP4 180 aa16.54■□□□□ 0.24
HOXA9-202ENST00000396345 CBLN4Q9NTU7 201 aa16.54■□□□□ 0.24
HOXA9-202ENST00000396345 DDX28Q9NUL7 540 aaKnown RBP16.54■□□□□ 0.24
HOXA9-202ENST00000396345 HAO2Q9NYQ3 351 aa16.54■□□□□ 0.24
HOXA9-202ENST00000396345 RRP15Q9Y3B9 282 aaKnown RBP16.54■□□□□ 0.24
HOXA9-202ENST00000396345 F5H5K5 113 aa16.53■□□□□ 0.24
HOXA9-202ENST00000396345 MPZL2O60487 215 aa16.53■□□□□ 0.24
HOXA9-202ENST00000396345 ICMTO60725 284 aa16.53■□□□□ 0.24
HOXA9-202ENST00000396345 ATP6V1G2O95670 118 aa16.53■□□□□ 0.24
HOXA9-202ENST00000396345 CD8AP01732 235 aa16.53■□□□□ 0.24
HOXA9-202ENST00000396345 TAF13Q15543 124 aa16.53■□□□□ 0.24
HOXA9-202ENST00000396345 OCLNQ16625 522 aa16.53■□□□□ 0.24
HOXA9-202ENST00000396345 RSPO1Q2MKA7 263 aaPredicted RBP16.53■□□□□ 0.24
HOXA9-202ENST00000396345 KRTAP27-1Q3LI81 207 aa16.53■□□□□ 0.24
HOXA9-202ENST00000396345 MEDAGQ5VYS4 303 aa16.53■□□□□ 0.24
HOXA9-202ENST00000396345 RGS7BPQ6MZT1 257 aaPredicted RBP16.53■□□□□ 0.24
HOXA9-202ENST00000396345 SPATC1Q76KD6 591 aa16.53■□□□□ 0.24
HOXA9-202ENST00000396345 ENTHD1Q8IYW4 607 aa16.53■□□□□ 0.24
HOXA9-202ENST00000396345 OR1J1Q8NGS3 322 aa16.53■□□□□ 0.24
HOXA9-202ENST00000396345 RHOXF1Q8NHV9 184 aa16.53■□□□□ 0.24
HOXA9-202ENST00000396345 ABHD4Q8TB40 342 aa16.53■□□□□ 0.24
HOXA9-202ENST00000396345 THEM6Q8WUY1 208 aa16.53■□□□□ 0.24
HOXA9-202ENST00000396345 IPCEF1Q8WWN9 437 aaPredicted RBP16.53■□□□□ 0.24
HOXA9-202ENST00000396345 APOL4Q9BPW4 351 aa16.53■□□□□ 0.24
HOXA9-202ENST00000396345 COPS4Q9BT78 406 aa16.53■□□□□ 0.24
HOXA9-202ENST00000396345 LAMP5Q9UJQ1 280 aa16.53■□□□□ 0.24
HOXA9-202ENST00000396345 B9A039 149 aa16.52■□□□□ 0.24
HOXA9-202ENST00000396345 ZNF878C9JN71 531 aa16.52■□□□□ 0.24
HOXA9-202ENST00000396345 ENTPD6O75354 484 aa16.52■□□□□ 0.24
HOXA9-202ENST00000396345 NGFP01138 241 aa16.52■□□□□ 0.24
HOXA9-202ENST00000396345 LYNP07948 512 aa16.52■□□□□ 0.24
HOXA9-202ENST00000396345 GABRB1P18505 474 aa16.52■□□□□ 0.24
HOXA9-202ENST00000396345 NUDT6P53370 316 aa16.52■□□□□ 0.24
HOXA9-202ENST00000396345 HCCSP53701 268 aa16.52■□□□□ 0.24
HOXA9-202ENST00000396345 ERVS71-1P61550 626 aa16.52■□□□□ 0.24
HOXA9-202ENST00000396345 ADARB1P78563 741 aaKnown RBP16.52■□□□□ 0.24
HOXA9-202ENST00000396345 TMED1Q13445 227 aa16.52■□□□□ 0.24
HOXA9-202ENST00000396345 MSMPQ1L6U9 139 aa16.52■□□□□ 0.24
HOXA9-202ENST00000396345 RFPL4BQ6ZWI9 263 aa16.52■□□□□ 0.24
HOXA9-202ENST00000396345 C1orf174Q8IYL3 243 aa16.52■□□□□ 0.24
HOXA9-202ENST00000396345 RNF133Q8WVZ7 376 aa16.52■□□□□ 0.24
HOXA9-202ENST00000396345 SPTSSAQ969W0 71 aa16.52■□□□□ 0.24
HOXA9-202ENST00000396345 MRPL24Q96A35 216 aaKnown RBP16.52■□□□□ 0.24
HOXA9-202ENST00000396345 AMELYQ99218 206 aa16.52■□□□□ 0.24
HOXA9-202ENST00000396345 ADI1Q9BV57 179 aa16.52■□□□□ 0.24
HOXA9-202ENST00000396345 PLK3Q9H4B4 646 aa16.52■□□□□ 0.24
HOXA9-202ENST00000396345 CXorf56Q9H5V9 222 aa16.52■□□□□ 0.24
HOXA9-202ENST00000396345 ADGRL4Q9HBW9 690 aa16.52■□□□□ 0.24
HOXA9-202ENST00000396345 TBCCD1Q9NVR7 557 aa16.52■□□□□ 0.24
HOXA9-202ENST00000396345 AASSQ9UDR5 926 aa16.52■□□□□ 0.24
HOXA9-202ENST00000396345 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP16.52■□□□□ 0.24
HOXA9-202ENST00000396345 FZR1Q9UM11 496 aa16.52■□□□□ 0.24
HOXA9-202ENST00000396345 ACSM4P0C7M7 580 aa16.51■□□□□ 0.23
HOXA9-202ENST00000396345 ALOX5APP20292 161 aa16.51■□□□□ 0.23
HOXA9-202ENST00000396345 SLC15A1P46059 708 aa16.51■□□□□ 0.23
HOXA9-202ENST00000396345 RGS6P49758 472 aa16.51■□□□□ 0.23
HOXA9-202ENST00000396345 TPTEP56180 551 aa16.51■□□□□ 0.23
HOXA9-202ENST00000396345 PPP1CBP62140 327 aa16.51■□□□□ 0.23
HOXA9-202ENST00000396345 POU4F2Q12837 409 aa16.51■□□□□ 0.23
HOXA9-202ENST00000396345 EFNB3Q15768 340 aa16.51■□□□□ 0.23
HOXA9-202ENST00000396345 SWI5Q1ZZU3 235 aa16.51■□□□□ 0.23
HOXA9-202ENST00000396345 MST1LQ2TV78 715 aa16.51■□□□□ 0.23
HOXA9-202ENST00000396345 DEFB113Q30KQ7 82 aa16.51■□□□□ 0.23
HOXA9-202ENST00000396345 SPATA46Q5T0L3 261 aa16.51■□□□□ 0.23
HOXA9-202ENST00000396345 ZNF691Q5VV52 312 aa16.51■□□□□ 0.23
HOXA9-202ENST00000396345 C11orf71Q6IPW1 123 aa16.51■□□□□ 0.23
HOXA9-202ENST00000396345 OR51G2Q8NGK0 314 aa16.51■□□□□ 0.23
HOXA9-202ENST00000396345 MBD6Q96DN6 1003 aa16.51■□□□□ 0.23
HOXA9-202ENST00000396345 Q96MT0 163 aa16.51■□□□□ 0.23
HOXA9-202ENST00000396345 MRPL37Q9BZE1 423 aaKnown RBP16.51■□□□□ 0.23
HOXA9-202ENST00000396345 VCX3BQ9H321 246 aa16.51■□□□□ 0.23
HOXA9-202ENST00000396345 BEX4Q9NWD9 120 aaPredicted RBP16.51■□□□□ 0.23
HOXA9-202ENST00000396345 CLN6Q9NWW5 311 aa16.51■□□□□ 0.23
HOXA9-202ENST00000396345 KLHDC2Q9Y2U9 406 aa16.51■□□□□ 0.23
HOXA9-202ENST00000396345 TMEM14AQ9Y6G1 99 aa16.51■□□□□ 0.23
HOXA9-202ENST00000396345 CCDC168Q8NDH2 2452 aa16.51■□□□□ 0.23
HOXA9-202ENST00000396345 SNTNA6NMZ2 147 aa16.5■□□□□ 0.23
HOXA9-202ENST00000396345 H0YAE9 185 aa16.5■□□□□ 0.23
HOXA9-202ENST00000396345 M0R135 149 aa16.5■□□□□ 0.23
HOXA9-202ENST00000396345 OVOL3O00110 214 aa16.5■□□□□ 0.23
HOXA9-202ENST00000396345 CLIC3O95833 236 aa16.5■□□□□ 0.23
HOXA9-202ENST00000396345 SBK2P0C263 348 aa16.5■□□□□ 0.23
HOXA9-202ENST00000396345 BMP4P12644 408 aa16.5■□□□□ 0.23
HOXA9-202ENST00000396345 CAPGP40121 348 aa16.5■□□□□ 0.23
HOXA9-202ENST00000396345 SNRPD2P62316 118 aaKnown RBP16.5■□□□□ 0.23
HOXA9-202ENST00000396345 GRB2P62993 217 aaKnown RBP16.5■□□□□ 0.23
HOXA9-202ENST00000396345 IL5RAQ01344 420 aa16.5■□□□□ 0.23
HOXA9-202ENST00000396345 RHOUQ7L0Q8 258 aa16.5■□□□□ 0.23
HOXA9-202ENST00000396345 LRP11Q86VZ4 500 aa16.5■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms