RNA–Protein interactions for RNA: ENST00000394611.6

RTN4-206, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 4,161 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-206ENST00000394611 MIB2Q96AX9 1013 aa7.98□□□□□ -1.13
RTN4-206ENST00000394611 ESRP2Q9H6T0 727 aaKnown RBP7.98□□□□□ -1.13
RTN4-206ENST00000394611 SMCO4Q9NRQ5 59 aa7.98□□□□□ -1.13
RTN4-206ENST00000394611 ST6GALNAC1Q9NSC7 600 aaPredicted RBP7.98□□□□□ -1.13
RTN4-206ENST00000394611 PHF3Q92576 2039 aaKnown RBP7.97□□□□□ -1.13
RTN4-206ENST00000394611 A0A1B0GV90 55 aa7.97□□□□□ -1.13
RTN4-206ENST00000394611 MEX3AA1L020 520 aaKnown RBP7.97□□□□□ -1.13
RTN4-206ENST00000394611 ATXN7O15265 892 aaPredicted RBP7.97□□□□□ -1.13
RTN4-206ENST00000394611 GPR37O15354 613 aa7.97□□□□□ -1.13
RTN4-206ENST00000394611 SLC34A2O95436 690 aa7.97□□□□□ -1.13
RTN4-206ENST00000394611 FABP4P15090 132 aa7.97□□□□□ -1.13
RTN4-206ENST00000394611 PXNP49023 591 aaPredicted RBP7.97□□□□□ -1.13
RTN4-206ENST00000394611 FHITP49789 147 aa7.97□□□□□ -1.13
RTN4-206ENST00000394611 IDH3GP51553 393 aaPredicted RBP7.97□□□□□ -1.13
RTN4-206ENST00000394611 REEP5Q00765 189 aa7.97□□□□□ -1.13
RTN4-206ENST00000394611 COL19A1Q14993 1142 aa7.97□□□□□ -1.13
RTN4-206ENST00000394611 CBLN3Q6UW01 205 aa7.97□□□□□ -1.13
RTN4-206ENST00000394611 NUDT18Q6ZVK8 323 aa7.97□□□□□ -1.13
RTN4-206ENST00000394611 BMPERQ8N8U9 685 aa7.97□□□□□ -1.13
RTN4-206ENST00000394611 OR51T1Q8NGJ9 327 aa7.97□□□□□ -1.13
RTN4-206ENST00000394611 OR2G2Q8NGZ5 317 aa7.97□□□□□ -1.13
RTN4-206ENST00000394611 PNPLA2Q96AD5 504 aa7.97□□□□□ -1.13
RTN4-206ENST00000394611 MAGT1Q9H0U3 335 aa7.97□□□□□ -1.13
RTN4-206ENST00000394611 FGF22Q9HCT0 170 aa7.97□□□□□ -1.13
RTN4-206ENST00000394611 MED17Q9NVC6 651 aa7.97□□□□□ -1.13
RTN4-206ENST00000394611 TBC1D29Q9UFV1 150 aa7.97□□□□□ -1.13
RTN4-206ENST00000394611 CD207Q9UJ71 328 aa7.97□□□□□ -1.13
RTN4-206ENST00000394611 ZDBF2Q9HCK1 2354 aa7.97□□□□□ -1.13
RTN4-206ENST00000394611 ANKRD20A5PA0PJZ0 165 aa7.97□□□□□ -1.13
RTN4-206ENST00000394611 ARRDC5A6NEK1 342 aa7.97□□□□□ -1.13
RTN4-206ENST00000394611 CXorf65A6NEN9 183 aa7.97□□□□□ -1.13
RTN4-206ENST00000394611 RFPL4AA6NLU0 287 aa7.97□□□□□ -1.13
RTN4-206ENST00000394611 SHISA8B8ZZ34 492 aa7.97□□□□□ -1.13
RTN4-206ENST00000394611 RFPL4AL1F8VTS6 287 aa7.97□□□□□ -1.13
RTN4-206ENST00000394611 HMGB3O15347 200 aaKnown RBP7.97□□□□□ -1.13
RTN4-206ENST00000394611 AGR2O95994 175 aa7.97□□□□□ -1.13
RTN4-206ENST00000394611 ACTL6AO96019 429 aa7.97□□□□□ -1.13
RTN4-206ENST00000394611 IL9P15248 144 aa7.97□□□□□ -1.13
RTN4-206ENST00000394611 PSMB6P28072 239 aa7.97□□□□□ -1.13
RTN4-206ENST00000394611 DHPSP49366 369 aaPredicted RBP7.97□□□□□ -1.13
RTN4-206ENST00000394611 FMODQ06828 376 aa7.97□□□□□ -1.13
RTN4-206ENST00000394611 MOGAT2Q3SYC2 334 aa7.97□□□□□ -1.13
RTN4-206ENST00000394611 TSPO2Q5TGU0 170 aa7.97□□□□□ -1.13
RTN4-206ENST00000394611 DMKNQ6E0U4 476 aaPredicted RBP7.97□□□□□ -1.13
RTN4-206ENST00000394611 DPPA2Q7Z7J5 298 aa7.97□□□□□ -1.13
RTN4-206ENST00000394611 SMRP1Q8NCR6 262 aa7.97□□□□□ -1.13
RTN4-206ENST00000394611 PGLYRP3Q96LB9 341 aa7.97□□□□□ -1.13
RTN4-206ENST00000394611 PRTFDC1Q9NRG1 225 aa7.97□□□□□ -1.13
RTN4-206ENST00000394611 TMEM74BQ9NUR3 256 aa7.97□□□□□ -1.13
RTN4-206ENST00000394611 IGLV3-16A0A075B6K0 115 aa7.97□□□□□ -1.13
RTN4-206ENST00000394611 EDDM13A0A1B0GTR0 161 aa7.97□□□□□ -1.13
RTN4-206ENST00000394611 ZNF727A8MUV8 499 aa7.97□□□□□ -1.13
RTN4-206ENST00000394611 BCL2L11O43521 198 aa7.97□□□□□ -1.13
RTN4-206ENST00000394611 NUDT21O43809 227 aaKnown RBP7.97□□□□□ -1.13
RTN4-206ENST00000394611 LMX1BO60663 402 aa7.97□□□□□ -1.13
RTN4-206ENST00000394611 CTAG2O75638 210 aa7.97□□□□□ -1.13
RTN4-206ENST00000394611 GLSO94925 669 aaPredicted RBP7.97□□□□□ -1.13
RTN4-206ENST00000394611 ABOP16442 354 aa7.97□□□□□ -1.13
RTN4-206ENST00000394611 CD96P40200 585 aa7.97□□□□□ -1.13
RTN4-206ENST00000394611 POU3F1Q03052 451 aaPredicted RBP7.97□□□□□ -1.13
RTN4-206ENST00000394611 RAB32Q13637 225 aa7.97□□□□□ -1.13
RTN4-206ENST00000394611 TMEM35AQ53FP2 167 aa7.97□□□□□ -1.13
RTN4-206ENST00000394611 RPL13AP3Q6NVV1 102 aa7.97□□□□□ -1.13
RTN4-206ENST00000394611 FAM199XQ6PEV8 388 aaPredicted RBP7.97□□□□□ -1.13
RTN4-206ENST00000394611 KCTD18Q6PI47 426 aaPredicted RBP7.97□□□□□ -1.13
RTN4-206ENST00000394611 C16orf47Q6ZP98 133 aaPredicted RBP7.97□□□□□ -1.13
RTN4-206ENST00000394611 ANGPTL5Q86XS5 388 aa7.97□□□□□ -1.13
RTN4-206ENST00000394611 NRSN1Q8IZ57 195 aa7.97□□□□□ -1.13
RTN4-206ENST00000394611 SUMF2Q8NBJ7 301 aa7.97□□□□□ -1.13
RTN4-206ENST00000394611 FRZBQ92765 325 aa7.97□□□□□ -1.13
RTN4-206ENST00000394611 HGDQ93099 445 aa7.97□□□□□ -1.13
RTN4-206ENST00000394611 LURAP1Q96LR2 239 aa7.97□□□□□ -1.13
RTN4-206ENST00000394611 AMELYQ99218 206 aa7.97□□□□□ -1.13
RTN4-206ENST00000394611 CDC6Q99741 560 aa7.97□□□□□ -1.13
RTN4-206ENST00000394611 LAT2Q9GZY6 243 aa7.97□□□□□ -1.13
RTN4-206ENST00000394611 NELFAQ9H3P2 528 aa7.97□□□□□ -1.13
RTN4-206ENST00000394611 SEMA6CQ9H3T2 930 aa7.97□□□□□ -1.13
RTN4-206ENST00000394611 LHX9Q9NQ69 397 aa7.97□□□□□ -1.13
RTN4-206ENST00000394611 UQCC1Q9NVA1 299 aa7.97□□□□□ -1.13
RTN4-206ENST00000394611 MED29Q9NX70 200 aa7.97□□□□□ -1.13
RTN4-206ENST00000394611 COA3Q9Y2R0 106 aaPredicted RBP7.97□□□□□ -1.13
RTN4-206ENST00000394611 ZFP92A6NM28 416 aa7.96□□□□□ -1.13
RTN4-206ENST00000394611 RHPN2P1A8MT19 583 aa7.96□□□□□ -1.13
RTN4-206ENST00000394611 BHLHE40O14503 412 aa7.96□□□□□ -1.13
RTN4-206ENST00000394611 P2RX6O15547 441 aa7.96□□□□□ -1.13
RTN4-206ENST00000394611 VEGFDO43915 354 aa7.96□□□□□ -1.13
RTN4-206ENST00000394611 PMS2P2O95744 297 aa7.96□□□□□ -1.13
RTN4-206ENST00000394611 MMP7P09237 267 aaPredicted RBP7.96□□□□□ -1.13
RTN4-206ENST00000394611 UBE2KP61086 200 aa7.96□□□□□ -1.13
RTN4-206ENST00000394611 ELOCQ15369 112 aa7.96□□□□□ -1.13
RTN4-206ENST00000394611 WDR38Q5JTN6 314 aa7.96□□□□□ -1.13
RTN4-206ENST00000394611 SLC18B1Q6NT16 456 aa7.96□□□□□ -1.13
RTN4-206ENST00000394611 NUP54Q7Z3B4 507 aa7.96□□□□□ -1.13
RTN4-206ENST00000394611 C20orf196Q8IYI0 205 aa7.96□□□□□ -1.13
RTN4-206ENST00000394611 HLA-CQ95604 372 aa7.96□□□□□ -1.13
RTN4-206ENST00000394611 WFIKKN1Q96NZ8 548 aa7.96□□□□□ -1.13
RTN4-206ENST00000394611 IP6K3Q96PC2 410 aa7.96□□□□□ -1.13
RTN4-206ENST00000394611 PITHD1Q9GZP4 211 aaPredicted RBP7.96□□□□□ -1.13
RTN4-206ENST00000394611 SLC25A32Q9H2D1 315 aa7.96□□□□□ -1.13
RTN4-206ENST00000394611 PELI2Q9HAT8 420 aa7.96□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms