RNA–Protein interactions for RNA: ENST00000362455.1

RNU4-39P-201, Transcript of RNA, U4 small nuclear 39, pseudogene, humanhuman

BASIC

Gene RNU4-39P, Length 127 nt, Biotype snRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-39P-201ENST00000362455 PIKFYVEQ9Y2I7 2098 aa4.26□□□□□ -1.73
RNU4-39P-201ENST00000362455 NSG1A0A0A6YYJ2 146 aa4.26□□□□□ -1.73
RNU4-39P-201ENST00000362455 OR6C65A6NJZ3 312 aa4.26□□□□□ -1.73
RNU4-39P-201ENST00000362455 H0YGG7 62 aa4.26□□□□□ -1.73
RNU4-39P-201ENST00000362455 GPRIN2O60269 458 aa4.26□□□□□ -1.73
RNU4-39P-201ENST00000362455 RALBP11234 206 aa4.26□□□□□ -1.73
RNU4-39P-201ENST00000362455 GATA2P23769 480 aaPredicted RBP4.26□□□□□ -1.73
RNU4-39P-201ENST00000362455 FOXN2P32314 431 aa4.26□□□□□ -1.73
RNU4-39P-201ENST00000362455 SLC26A3P40879 764 aa4.26□□□□□ -1.73
RNU4-39P-201ENST00000362455 GRIA1P42261 906 aa4.26□□□□□ -1.73
RNU4-39P-201ENST00000362455 NSG1P42857 185 aa4.26□□□□□ -1.73
RNU4-39P-201ENST00000362455 PPT1P50897 306 aa4.26□□□□□ -1.73
RNU4-39P-201ENST00000362455 EMP2P54851 167 aa4.26□□□□□ -1.73
RNU4-39P-201ENST00000362455 RND3P61587 244 aa4.26□□□□□ -1.73
RNU4-39P-201ENST00000362455 TFDP3Q5H9I0 405 aa4.26□□□□□ -1.73
RNU4-39P-201ENST00000362455 PVRIGQ6DKI7 326 aa4.26□□□□□ -1.73
RNU4-39P-201ENST00000362455 MYO7BQ6PIF6 2116 aa4.26□□□□□ -1.73
RNU4-39P-201ENST00000362455 NLRP9Q7RTR0 991 aa4.26□□□□□ -1.73
RNU4-39P-201ENST00000362455 KRT222Q8N1A0 295 aa4.26□□□□□ -1.73
RNU4-39P-201ENST00000362455 CSNK1A1LQ8N752 337 aa4.26□□□□□ -1.73
RNU4-39P-201ENST00000362455 OR2L3Q8NG85 312 aa4.26□□□□□ -1.73
RNU4-39P-201ENST00000362455 OR9A4Q8NGU2 314 aa4.26□□□□□ -1.73
RNU4-39P-201ENST00000362455 OR2L8Q8NGY9 312 aa4.26□□□□□ -1.73
RNU4-39P-201ENST00000362455 SLC5A11Q8WWX8 675 aa4.26□□□□□ -1.73
RNU4-39P-201ENST00000362455 ELMO1Q92556 727 aa4.26□□□□□ -1.73
RNU4-39P-201ENST00000362455 TMEM80Q96HE8 168 aa4.26□□□□□ -1.73
RNU4-39P-201ENST00000362455 VAT1Q99536 393 aa4.26□□□□□ -1.73
RNU4-39P-201ENST00000362455 SMR3AQ99954 134 aa4.26□□□□□ -1.73
RNU4-39P-201ENST00000362455 SELENOSQ9BQE4 189 aa4.26□□□□□ -1.73
RNU4-39P-201ENST00000362455 UCK2Q9BZX2 261 aa4.26□□□□□ -1.73
RNU4-39P-201ENST00000362455 SMPD3Q9NY59 655 aaPredicted RBP4.26□□□□□ -1.73
RNU4-39P-201ENST00000362455 STMN3Q9NZ72 180 aa4.26□□□□□ -1.73
RNU4-39P-201ENST00000362455 ZNF282Q9UDV7 671 aaPredicted RBP4.26□□□□□ -1.73
RNU4-39P-201ENST00000362455 NXT1Q9UKK6 140 aaKnown RBP4.26□□□□□ -1.73
RNU4-39P-201ENST00000362455 NPIPA1Q9UND3 350 aa4.26□□□□□ -1.73
RNU4-39P-201ENST00000362455 ALG6Q9Y672 507 aa4.26□□□□□ -1.73
RNU4-39P-201ENST00000362455 COL6A5A8TX70 2615 aa4.26□□□□□ -1.73
RNU4-39P-201ENST00000362455 ATRQ13535 2644 aa4.26□□□□□ -1.73
RNU4-39P-201ENST00000362455 FN1P02751 2386 aaKnown RBP4.26□□□□□ -1.73
RNU4-39P-201ENST00000362455 ANK3Q12955 4377 aaKnown RBP4.25□□□□□ -1.73
RNU4-39P-201ENST00000362455 MED13LQ71F56 2210 aa4.25□□□□□ -1.73
RNU4-39P-201ENST00000362455 NSD1Q96L73 2696 aaPredicted RBP4.25□□□□□ -1.73
RNU4-39P-201ENST00000362455 NKX2-6A6NCS4 301 aa4.25□□□□□ -1.73
RNU4-39P-201ENST00000362455 HACD1B0YJ81 288 aa4.25□□□□□ -1.73
RNU4-39P-201ENST00000362455 DNAJB6O75190 326 aa4.25□□□□□ -1.73
RNU4-39P-201ENST00000362455 C1orf105O95561 183 aa4.25□□□□□ -1.73
RNU4-39P-201ENST00000362455 STATHP02808 62 aa4.25□□□□□ -1.73
RNU4-39P-201ENST00000362455 SLC35E2P0CK97 266 aa4.25□□□□□ -1.73
RNU4-39P-201ENST00000362455 CD99P14209 185 aa4.25□□□□□ -1.73
RNU4-39P-201ENST00000362455 CD1EP15812 388 aa4.25□□□□□ -1.73
RNU4-39P-201ENST00000362455 HNF1AP20823 631 aa4.25□□□□□ -1.73
RNU4-39P-201ENST00000362455 FLNAP21333 2647 aaKnown RBP4.25□□□□□ -1.73
RNU4-39P-201ENST00000362455 LIM2P55344 173 aa4.25□□□□□ -1.73
RNU4-39P-201ENST00000362455 CHIT1Q13231 466 aa4.25□□□□□ -1.73
RNU4-39P-201ENST00000362455 TFDP2Q14188 446 aa4.25□□□□□ -1.73
RNU4-39P-201ENST00000362455 ITIH4Q14624 930 aa4.25□□□□□ -1.73
RNU4-39P-201ENST00000362455 POU6F1Q14863 301 aa4.25□□□□□ -1.73
RNU4-39P-201ENST00000362455 SYPL1Q16563 259 aa4.25□□□□□ -1.73
RNU4-39P-201ENST00000362455 TIMM50Q3ZCQ8 353 aa4.25□□□□□ -1.73
RNU4-39P-201ENST00000362455 GGTA1PQ4G0N0 100 aa4.25□□□□□ -1.73
RNU4-39P-201ENST00000362455 FILIP1LQ4L180 1135 aa4.25□□□□□ -1.73
RNU4-39P-201ENST00000362455 PRMT9Q6P2P2 845 aa4.25□□□□□ -1.73
RNU4-39P-201ENST00000362455 PRSS41Q7RTY9 318 aa4.25□□□□□ -1.73
RNU4-39P-201ENST00000362455 TGIF2LYQ8IUE0 185 aa4.25□□□□□ -1.73
RNU4-39P-201ENST00000362455 CCDC50Q8IVM0 306 aa4.25□□□□□ -1.73
RNU4-39P-201ENST00000362455 KATNAL2Q8IYT4 538 aa4.25□□□□□ -1.73
RNU4-39P-201ENST00000362455 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP4.25□□□□□ -1.73
RNU4-39P-201ENST00000362455 DNAAF3Q8N9W5 541 aa4.25□□□□□ -1.73
RNU4-39P-201ENST00000362455 STEAP2Q8NFT2 490 aa4.25□□□□□ -1.73
RNU4-39P-201ENST00000362455 ACTL9Q8TC94 416 aa4.25□□□□□ -1.73
RNU4-39P-201ENST00000362455 PHF10Q8WUB8 498 aaKnown RBP4.25□□□□□ -1.73
RNU4-39P-201ENST00000362455 OR2A5Q96R48 311 aa4.25□□□□□ -1.73
RNU4-39P-201ENST00000362455 CYTH2Q99418 400 aa4.25□□□□□ -1.73
RNU4-39P-201ENST00000362455 SLC6A7Q99884 636 aa4.25□□□□□ -1.73
RNU4-39P-201ENST00000362455 TBL1YQ9BQ87 522 aa4.25□□□□□ -1.73
RNU4-39P-201ENST00000362455 PNO1Q9NRX1 252 aaKnown RBP4.25□□□□□ -1.73
RNU4-39P-201ENST00000362455 L3MBTL1Q9Y468 752 aa4.25□□□□□ -1.73
RNU4-39P-201ENST00000362455 MAB21L2Q9Y586 359 aa4.25□□□□□ -1.73
RNU4-39P-201ENST00000362455 AKAP6Q13023 2319 aa4.24□□□□□ -1.73
RNU4-39P-201ENST00000362455 FRG2CA6NGY1 282 aa4.24□□□□□ -1.73
RNU4-39P-201ENST00000362455 FAM220BPB1ANY3 271 aa4.24□□□□□ -1.73
RNU4-39P-201ENST00000362455 H7C0C1 242 aa4.24□□□□□ -1.73
RNU4-39P-201ENST00000362455 APOC4-APOC2K7ER74 178 aa4.24□□□□□ -1.73
RNU4-39P-201ENST00000362455 PSTPIP1O43586 416 aa4.24□□□□□ -1.73
RNU4-39P-201ENST00000362455 APOC2P02655 101 aa4.24□□□□□ -1.73
RNU4-39P-201ENST00000362455 FTH1P02794 183 aa4.24□□□□□ -1.73
RNU4-39P-201ENST00000362455 CD55P08174 381 aa4.24□□□□□ -1.73
RNU4-39P-201ENST00000362455 ERGP11308 486 aa4.24□□□□□ -1.73
RNU4-39P-201ENST00000362455 PGAM2P15259 253 aa4.24□□□□□ -1.73
RNU4-39P-201ENST00000362455 PGCP20142 388 aa4.24□□□□□ -1.73
RNU4-39P-201ENST00000362455 KLK2P20151 261 aa4.24□□□□□ -1.73
RNU4-39P-201ENST00000362455 MSNP26038 577 aaKnown RBP4.24□□□□□ -1.73
RNU4-39P-201ENST00000362455 IL2RGP31785 369 aa4.24□□□□□ -1.73
RNU4-39P-201ENST00000362455 HPCAL1P37235 193 aa4.24□□□□□ -1.73
RNU4-39P-201ENST00000362455 SLC1A1P43005 524 aa4.24□□□□□ -1.73
RNU4-39P-201ENST00000362455 ATP5OP48047 213 aa4.24□□□□□ -1.73
RNU4-39P-201ENST00000362455 FNTAP49354 379 aa4.24□□□□□ -1.73
RNU4-39P-201ENST00000362455 VLDLRP98155 873 aa4.24□□□□□ -1.73
RNU4-39P-201ENST00000362455 ACVR1Q04771 509 aa4.24□□□□□ -1.73
RNU4-39P-201ENST00000362455 ST3GAL3Q11203 375 aa4.24□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 72.8 ms