RNA–Protein interactions for RNA: ENST00000321117.9

DNMT3A-202, Transcript of DNA methyltransferase 3 alpha, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene DNMT3A, Length 4,279 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-202ENST00000321117 CRIPAKQ8N1N5 446 aa11.51□□□□□ -0.57
DNMT3A-202ENST00000321117 EXD3Q8N9H8 876 aa11.51□□□□□ -0.57
DNMT3A-202ENST00000321117 TAAR8Q969N4 342 aa11.51□□□□□ -0.57
DNMT3A-202ENST00000321117 ANKRD9Q96BM1 317 aaPredicted RBP11.51□□□□□ -0.57
DNMT3A-202ENST00000321117 TOE1Q96GM8 510 aaKnown RBP11.51□□□□□ -0.57
DNMT3A-202ENST00000321117 TCEAL7Q9BRU2 100 aa11.51□□□□□ -0.57
DNMT3A-202ENST00000321117 CRB3Q9BUF7 120 aa11.51□□□□□ -0.57
DNMT3A-202ENST00000321117 BANF2Q9H503 90 aa11.51□□□□□ -0.57
DNMT3A-202ENST00000321117 ATG12O94817 140 aa11.5□□□□□ -0.57
DNMT3A-202ENST00000321117 CD80P33681 288 aa11.5□□□□□ -0.57
DNMT3A-202ENST00000321117 SFTPDP35247 375 aa11.5□□□□□ -0.57
DNMT3A-202ENST00000321117 CASRP41180 1078 aa11.5□□□□□ -0.57
DNMT3A-202ENST00000321117 BIDP55957 195 aa11.5□□□□□ -0.57
DNMT3A-202ENST00000321117 RBM39Q14498 530 aaKnown RBP11.5□□□□□ -0.57
DNMT3A-202ENST00000321117 SGCBQ16585 318 aa11.5□□□□□ -0.57
DNMT3A-202ENST00000321117 LRRTM1Q86UE6 522 aa11.5□□□□□ -0.57
DNMT3A-202ENST00000321117 SPACA5Q96QH8 159 aa11.5□□□□□ -0.57
DNMT3A-202ENST00000321117 MFRPQ9BY79 579 aa11.5□□□□□ -0.57
DNMT3A-202ENST00000321117 ZNF160Q9HCG1 818 aa11.5□□□□□ -0.57
DNMT3A-202ENST00000321117 EXOSC3Q9NQT5 275 aaKnown RBP11.5□□□□□ -0.57
DNMT3A-202ENST00000321117 LUZP4Q9P127 313 aa11.5□□□□□ -0.57
DNMT3A-202ENST00000321117 MMACHCQ9Y4U1 282 aa11.5□□□□□ -0.57
DNMT3A-202ENST00000321117 LRP12Q9Y561 859 aa11.5□□□□□ -0.57
DNMT3A-202ENST00000321117 PRSS44E7EML9 344 aa11.5□□□□□ -0.57
DNMT3A-202ENST00000321117 OR2A4O95047 310 aa11.5□□□□□ -0.57
DNMT3A-202ENST00000321117 GNB3P16520 340 aa11.5□□□□□ -0.57
DNMT3A-202ENST00000321117 BLVRBP30043 206 aaPredicted RBP11.5□□□□□ -0.57
DNMT3A-202ENST00000321117 PARM1Q6UWI2 310 aa11.5□□□□□ -0.57
DNMT3A-202ENST00000321117 CDC20BQ86Y33 519 aa11.5□□□□□ -0.57
DNMT3A-202ENST00000321117 C14orf79Q96F83 325 aa11.5□□□□□ -0.57
DNMT3A-202ENST00000321117 VSTM2LQ96N03 204 aa11.5□□□□□ -0.57
DNMT3A-202ENST00000321117 OR2A7Q96R45 310 aa11.5□□□□□ -0.57
DNMT3A-202ENST00000321117 TAF9BQ9HBM6 251 aa11.5□□□□□ -0.57
DNMT3A-202ENST00000321117 ZNF304Q9HCX3 659 aa11.5□□□□□ -0.57
DNMT3A-202ENST00000321117 FAM212BQ9NTI7 297 aaPredicted RBP11.5□□□□□ -0.57
DNMT3A-202ENST00000321117 SIGLEC6O43699 453 aa11.5□□□□□ -0.57
DNMT3A-202ENST00000321117 SLC2A1P11166 492 aa11.5□□□□□ -0.57
DNMT3A-202ENST00000321117 CX3CR1P49238 355 aa11.5□□□□□ -0.57
DNMT3A-202ENST00000321117 TMEM255AQ5JRV8 349 aa11.5□□□□□ -0.57
DNMT3A-202ENST00000321117 ATPAF1Q5TC12 328 aaPredicted RBP11.5□□□□□ -0.57
DNMT3A-202ENST00000321117 FAM57BQ71RH2 274 aa11.5□□□□□ -0.57
DNMT3A-202ENST00000321117 OR5B2Q96R09 309 aa11.5□□□□□ -0.57
DNMT3A-202ENST00000321117 SYT3Q9BQG1 590 aa11.5□□□□□ -0.57
DNMT3A-202ENST00000321117 UQCC2Q9BRT2 126 aa11.5□□□□□ -0.57
DNMT3A-202ENST00000321117 C1orf123Q9NWV4 160 aa11.5□□□□□ -0.57
DNMT3A-202ENST00000321117 GPR31O00270 319 aa11.49□□□□□ -0.57
DNMT3A-202ENST00000321117 RAD51DO75771 328 aa11.49□□□□□ -0.57
DNMT3A-202ENST00000321117 IGHG1P01857 330 aa11.49□□□□□ -0.57
DNMT3A-202ENST00000321117 IL9P15248 144 aa11.49□□□□□ -0.57
DNMT3A-202ENST00000321117 TBPP20226 339 aa11.49□□□□□ -0.57
DNMT3A-202ENST00000321117 GABRR1P24046 479 aa11.49□□□□□ -0.57
DNMT3A-202ENST00000321117 H2BFSP57053 126 aa11.49□□□□□ -0.57
DNMT3A-202ENST00000321117 RSU1Q15404 277 aa11.49□□□□□ -0.57
DNMT3A-202ENST00000321117 CEBPEQ15744 281 aa11.49□□□□□ -0.57
DNMT3A-202ENST00000321117 ETFDHQ16134 617 aa11.49□□□□□ -0.57
DNMT3A-202ENST00000321117 FAM69BQ5VUD6 431 aa11.49□□□□□ -0.57
DNMT3A-202ENST00000321117 HEXA-AS1Q9H8Q6 139 aa11.49□□□□□ -0.57
DNMT3A-202ENST00000321117 KLHDC2Q9Y2U9 406 aa11.49□□□□□ -0.57
DNMT3A-202ENST00000321117 DUX1O43812 170 aa11.49□□□□□ -0.57
DNMT3A-202ENST00000321117 IL33O95760 270 aa11.49□□□□□ -0.57
DNMT3A-202ENST00000321117 RPS4Y1P22090 263 aaKnown RBP11.49□□□□□ -0.57
DNMT3A-202ENST00000321117 B3GALT1Q9Y5Z6 326 aa11.49□□□□□ -0.57
DNMT3A-202ENST00000321117 RAB19A4D1S5 217 aa11.49□□□□□ -0.57
DNMT3A-202ENST00000321117 HRKO00198 91 aa11.49□□□□□ -0.57
DNMT3A-202ENST00000321117 IFNA17P01571 189 aa11.49□□□□□ -0.57
DNMT3A-202ENST00000321117 NGFRP08138 427 aa11.49□□□□□ -0.57
DNMT3A-202ENST00000321117 CD96P40200 585 aa11.49□□□□□ -0.57
DNMT3A-202ENST00000321117 SLC26A5P58743 744 aa11.49□□□□□ -0.57
DNMT3A-202ENST00000321117 FAM53BQ14153 422 aa11.49□□□□□ -0.57
DNMT3A-202ENST00000321117 ZNF658BQ4V348 819 aaPredicted RBP11.49□□□□□ -0.57
DNMT3A-202ENST00000321117 PLXDC1Q8IUK5 500 aa11.49□□□□□ -0.57
DNMT3A-202ENST00000321117 STPG2Q8N412 459 aa11.49□□□□□ -0.57
DNMT3A-202ENST00000321117 ZDHHC22Q8N966 263 aa11.49□□□□□ -0.57
DNMT3A-202ENST00000321117 S100PBPQ96BU1 408 aa11.49□□□□□ -0.57
DNMT3A-202ENST00000321117 EMC6Q9BV81 110 aa11.49□□□□□ -0.57
DNMT3A-202ENST00000321117 UNKLQ9H9P5 680 aaKnown RBP11.49□□□□□ -0.57
DNMT3A-202ENST00000321117 NPTNQ9Y639 398 aa11.49□□□□□ -0.57
DNMT3A-202ENST00000321117 NPIPA2E9PIF3 369 aa11.49□□□□□ -0.57
DNMT3A-202ENST00000321117 NPIPA3F8WFD2 350 aa11.49□□□□□ -0.57
DNMT3A-202ENST00000321117 CAV2P51636 162 aa11.49□□□□□ -0.57
DNMT3A-202ENST00000321117 DEFB133Q30KQ1 61 aa11.49□□□□□ -0.57
DNMT3A-202ENST00000321117 MESTQ5EB52 335 aa11.49□□□□□ -0.57
DNMT3A-202ENST00000321117 ESX1Q8N693 406 aa11.49□□□□□ -0.57
DNMT3A-202ENST00000321117 CMBLQ96DG6 245 aa11.49□□□□□ -0.57
DNMT3A-202ENST00000321117 SEH1LQ96EE3 360 aa11.49□□□□□ -0.57
DNMT3A-202ENST00000321117 MENTQ9BUN1 341 aa11.49□□□□□ -0.57
DNMT3A-202ENST00000321117 TPSD1Q9BZJ3 242 aa11.49□□□□□ -0.57
DNMT3A-202ENST00000321117 SLC5A7Q9GZV3 580 aa11.49□□□□□ -0.57
DNMT3A-202ENST00000321117 RASL12Q9NYN1 266 aa11.49□□□□□ -0.57
DNMT3A-202ENST00000321117 J3QRE1 110 aa11.48□□□□□ -0.57
DNMT3A-202ENST00000321117 CSF2RBP32927 897 aa11.48□□□□□ -0.57
DNMT3A-202ENST00000321117 CTHP32929 405 aa11.48□□□□□ -0.57
DNMT3A-202ENST00000321117 SRSF5Q13243 272 aaKnown RBP11.48□□□□□ -0.57
DNMT3A-202ENST00000321117 PPA1Q15181 289 aa11.48□□□□□ -0.57
DNMT3A-202ENST00000321117 ELAVL1Q15717 326 aaKnown RBP11.48□□□□□ -0.57
DNMT3A-202ENST00000321117 H1FNTQ75WM6 255 aaPredicted RBP11.48□□□□□ -0.57
DNMT3A-202ENST00000321117 OR5L2Q8NGL0 311 aa11.48□□□□□ -0.57
DNMT3A-202ENST00000321117 GPX8Q8TED1 209 aa11.48□□□□□ -0.57
DNMT3A-202ENST00000321117 TSLPQ969D9 159 aa11.48□□□□□ -0.57
DNMT3A-202ENST00000321117 NPAS1Q99742 590 aa11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 92.2 ms