RNA–Protein interactions for RNA: ENST00000263708.6

PTPN4-201, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPN4, Length 10,300 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-201ENST00000263708 KCNE4Q8WWG9 221 aa10.42□□□□□ -0.74
PTPN4-201ENST00000263708 BCO1Q9HAY6 547 aa10.42□□□□□ -0.74
PTPN4-201ENST00000263708 PRKRAO75569 313 aaKnown RBP10.42□□□□□ -0.74
PTPN4-201ENST00000263708 LY86O95711 162 aa10.42□□□□□ -0.74
PTPN4-201ENST00000263708 PIGAP37287 484 aa10.42□□□□□ -0.74
PTPN4-201ENST00000263708 SRP9P49458 86 aaKnown RBP10.42□□□□□ -0.74
PTPN4-201ENST00000263708 TSPAN31Q12999 210 aa10.42□□□□□ -0.74
PTPN4-201ENST00000263708 PDZK1IP1Q13113 114 aa10.42□□□□□ -0.74
PTPN4-201ENST00000263708 HENMT1Q5T8I9 393 aaKnown RBP10.42□□□□□ -0.74
PTPN4-201ENST00000263708 CYHR1Q6ZMK1 362 aa10.42□□□□□ -0.74
PTPN4-201ENST00000263708 EMC6Q9BV81 110 aa10.42□□□□□ -0.74
PTPN4-201ENST00000263708 GPRIN2O60269 458 aa10.42□□□□□ -0.74
PTPN4-201ENST00000263708 OR2J2O76002 312 aa10.42□□□□□ -0.74
PTPN4-201ENST00000263708 ADRA2CP18825 462 aa10.42□□□□□ -0.74
PTPN4-201ENST00000263708 CCR7P32248 378 aa10.42□□□□□ -0.74
PTPN4-201ENST00000263708 RBP2P50120 134 aa10.42□□□□□ -0.74
PTPN4-201ENST00000263708 ZNF788Q6ZQV5 615 aa10.42□□□□□ -0.74
PTPN4-201ENST00000263708 RBPMS2Q6ZRY4 209 aaKnown RBP10.42□□□□□ -0.74
PTPN4-201ENST00000263708 H1FNTQ75WM6 255 aaPredicted RBP10.42□□□□□ -0.74
PTPN4-201ENST00000263708 RDH5Q92781 318 aa10.42□□□□□ -0.74
PTPN4-201ENST00000263708 CABLES2Q9BTV7 478 aa10.42□□□□□ -0.74
PTPN4-201ENST00000263708 NUP214P35658 2090 aaPredicted RBP10.41□□□□□ -0.74
PTPN4-201ENST00000263708 CD200P41217 278 aa10.41□□□□□ -0.74
PTPN4-201ENST00000263708 RFX2P48378 723 aa10.41□□□□□ -0.74
PTPN4-201ENST00000263708 ZNF573Q86YE8 665 aa10.41□□□□□ -0.74
PTPN4-201ENST00000263708 ZNF480Q8WV37 535 aa10.41□□□□□ -0.74
PTPN4-201ENST00000263708 HINT3Q9NQE9 182 aaKnown RBP10.41□□□□□ -0.74
PTPN4-201ENST00000263708 PCDHGA9Q9Y5G4 932 aaKnown RBP10.41□□□□□ -0.74
PTPN4-201ENST00000263708 MBP02144 154 aa10.41□□□□□ -0.74
PTPN4-201ENST00000263708 RPUSD3Q6P087 351 aaKnown RBP10.41□□□□□ -0.74
PTPN4-201ENST00000263708 OLIG1Q8TAK6 271 aa10.41□□□□□ -0.74
PTPN4-201ENST00000263708 C16orf70Q9BSU1 422 aa10.41□□□□□ -0.74
PTPN4-201ENST00000263708 CYC1P08574 325 aa10.41□□□□□ -0.74
PTPN4-201ENST00000263708 FBXO46Q6PJ61 603 aaPredicted RBP10.41□□□□□ -0.74
PTPN4-201ENST00000263708 SMIM7Q9BQ49 75 aa10.41□□□□□ -0.74
PTPN4-201ENST00000263708 ACOT8O14734 319 aa10.41□□□□□ -0.74
PTPN4-201ENST00000263708 PPIHO43447 177 aaKnown RBP10.41□□□□□ -0.74
PTPN4-201ENST00000263708 PAPLNO95428 1278 aa10.41□□□□□ -0.74
PTPN4-201ENST00000263708 OR5AL1P0C617 328 aa10.41□□□□□ -0.74
PTPN4-201ENST00000263708 CEBPEQ15744 281 aa10.41□□□□□ -0.74
PTPN4-201ENST00000263708 COMMD1Q8N668 190 aa10.41□□□□□ -0.74
PTPN4-201ENST00000263708 ISG20Q96AZ6 181 aaKnown RBP10.41□□□□□ -0.74
PTPN4-201ENST00000263708 CLEC1BQ9P126 229 aa10.41□□□□□ -0.74
PTPN4-201ENST00000263708 GJB3O75712 270 aa10.41□□□□□ -0.74
PTPN4-201ENST00000263708 DUS4LO95620 317 aaKnown RBP10.41□□□□□ -0.74
PTPN4-201ENST00000263708 CRYAAP02489 173 aa10.41□□□□□ -0.74
PTPN4-201ENST00000263708 CTXN2P0C2S0 81 aa10.41□□□□□ -0.74
PTPN4-201ENST00000263708 ACSM6Q6P461 480 aa10.41□□□□□ -0.74
PTPN4-201ENST00000263708 PRSS45Q7RTY3 260 aa10.41□□□□□ -0.74
PTPN4-201ENST00000263708 CLMPQ9H6B4 373 aa10.41□□□□□ -0.74
PTPN4-201ENST00000263708 PARD6AQ9NPB6 346 aa10.41□□□□□ -0.74
PTPN4-201ENST00000263708 FAM221AA4D161 298 aa10.41□□□□□ -0.74
PTPN4-201ENST00000263708 ERVFC1P60507 584 aa10.41□□□□□ -0.74
PTPN4-201ENST00000263708 C1orf140Q5VVS0 124 aa10.41□□□□□ -0.74
PTPN4-201ENST00000263708 SLC35E4Q6ICL7 350 aa10.41□□□□□ -0.74
PTPN4-201ENST00000263708 KLHDC1Q8N7A1 406 aa10.41□□□□□ -0.74
PTPN4-201ENST00000263708 RBPMSQ93062 196 aaKnown RBP10.41□□□□□ -0.74
PTPN4-201ENST00000263708 POM121L2Q96KW2 1035 aa10.41□□□□□ -0.74
PTPN4-201ENST00000263708 G3V2L1 256 aa10.41□□□□□ -0.74
PTPN4-201ENST00000263708 BMP5P22003 454 aa10.41□□□□□ -0.74
PTPN4-201ENST00000263708 OPRK1P41145 380 aa10.41□□□□□ -0.74
PTPN4-201ENST00000263708 ARFGAP1Q8N6T3 406 aa10.41□□□□□ -0.74
PTPN4-201ENST00000263708 INSM2Q96T92 566 aaPredicted RBP10.41□□□□□ -0.74
PTPN4-201ENST00000263708 UQCC2Q9BRT2 126 aa10.41□□□□□ -0.74
PTPN4-201ENST00000263708 GON7Q9BXV9 100 aa10.41□□□□□ -0.74
PTPN4-201ENST00000263708 SDR39U1Q9NRG7 319 aaPredicted RBP10.41□□□□□ -0.74
PTPN4-201ENST00000263708 NEURL1O76050 574 aa10.41□□□□□ -0.74
PTPN4-201ENST00000263708 NRASP01111 189 aa10.41□□□□□ -0.74
PTPN4-201ENST00000263708 SULT1A2P50226 295 aa10.41□□□□□ -0.74
PTPN4-201ENST00000263708 ZNF528Q3MIS6 628 aa10.41□□□□□ -0.74
PTPN4-201ENST00000263708 EXD3Q8N9H8 876 aa10.41□□□□□ -0.74
PTPN4-201ENST00000263708 SLC7A6Q92536 515 aa10.41□□□□□ -0.74
PTPN4-201ENST00000263708 TMEM231Q9H6L2 316 aa10.41□□□□□ -0.74
PTPN4-201ENST00000263708 A0A1B0GX78 115 aa10.41□□□□□ -0.74
PTPN4-201ENST00000263708 GYPAP02724 150 aa10.41□□□□□ -0.74
PTPN4-201ENST00000263708 GNG10P50151 68 aa10.41□□□□□ -0.74
PTPN4-201ENST00000263708 FAM78AQ5JUQ0 283 aa10.41□□□□□ -0.74
PTPN4-201ENST00000263708 FGF21Q9NSA1 209 aa10.41□□□□□ -0.74
PTPN4-201ENST00000263708 B3GALT5Q9Y2C3 310 aa10.41□□□□□ -0.74
PTPN4-201ENST00000263708 IGKV6D-41A0A0C4DH26 115 aa10.4□□□□□ -0.74
PTPN4-201ENST00000263708 FIGNL2A6NMB9 653 aa10.4□□□□□ -0.74
PTPN4-201ENST00000263708 PLAURQ03405 335 aa10.4□□□□□ -0.74
PTPN4-201ENST00000263708 PRDX4Q13162 271 aa10.4□□□□□ -0.74
PTPN4-201ENST00000263708 DOK3Q7L591 496 aa10.4□□□□□ -0.74
PTPN4-201ENST00000263708 SLC51BQ86UW2 128 aa10.4□□□□□ -0.74
PTPN4-201ENST00000263708 KCTD12Q96CX2 325 aaKnown RBP10.4□□□□□ -0.74
PTPN4-201ENST00000263708 SEH1LQ96EE3 360 aa10.4□□□□□ -0.74
PTPN4-201ENST00000263708 RSRP1Q9BUV0 290 aa10.4□□□□□ -0.74
PTPN4-201ENST00000263708 TMEM147Q9BVK8 224 aa10.4□□□□□ -0.74
PTPN4-201ENST00000263708 NDRG4Q9ULP0 352 aaKnown RBP10.4□□□□□ -0.74
PTPN4-201ENST00000263708 AUP1Q9Y679 476 aa10.4□□□□□ -0.74
PTPN4-201ENST00000263708 CSO75390 466 aaKnown RBP10.4□□□□□ -0.74
PTPN4-201ENST00000263708 RRASP10301 218 aa10.4□□□□□ -0.74
PTPN4-201ENST00000263708 GCSHP23434 173 aa10.4□□□□□ -0.74
PTPN4-201ENST00000263708 GPM6AP51674 278 aa10.4□□□□□ -0.74
PTPN4-201ENST00000263708 RELAQ04206 551 aa10.4□□□□□ -0.74
PTPN4-201ENST00000263708 LYRM7Q5U5X0 104 aa10.4□□□□□ -0.74
PTPN4-201ENST00000263708 CORO6Q6QEF8 472 aa10.4□□□□□ -0.74
PTPN4-201ENST00000263708 TMEM200CA6NKL6 621 aa10.4□□□□□ -0.74
PTPN4-201ENST00000263708 SPRY3O43610 288 aa10.4□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms