RNA–Protein interactions for RNA: ENST00000238688.9

SLIRP-201, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

APPRIS P3 TSL 2 BASIC

Gene SLIRP, Length 394 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-201ENST00000238688 CD8B2A6NJW9 211 aa11.64□□□□□ -0.55
SLIRP-201ENST00000238688 NOTOA8MTQ0 251 aa11.64□□□□□ -0.55
SLIRP-201ENST00000238688 VGLL3A8MV65 326 aa11.64□□□□□ -0.55
SLIRP-201ENST00000238688 RPL36A-HNRNPH2H7BZ11 118 aa11.64□□□□□ -0.55
SLIRP-201ENST00000238688 RAMP1O60894 148 aa11.64□□□□□ -0.55
SLIRP-201ENST00000238688 TPPPO94811 219 aa11.64□□□□□ -0.55
SLIRP-201ENST00000238688 OPN1LWP04000 364 aa11.64□□□□□ -0.55
SLIRP-201ENST00000238688 H2BFMP0C1H6 154 aa11.64□□□□□ -0.55
SLIRP-201ENST00000238688 ZNF24P17028 368 aa11.64□□□□□ -0.55
SLIRP-201ENST00000238688 RAB3BP20337 219 aa11.64□□□□□ -0.55
SLIRP-201ENST00000238688 ACHEP22303 614 aa11.64□□□□□ -0.55
SLIRP-201ENST00000238688 TGFBR1P36897 503 aa11.64□□□□□ -0.55
SLIRP-201ENST00000238688 PCBD1P61457 104 aa11.64□□□□□ -0.55
SLIRP-201ENST00000238688 ETFDHQ16134 617 aa11.64□□□□□ -0.55
SLIRP-201ENST00000238688 FAM27BQ5VT28 67 aa11.64□□□□□ -0.55
SLIRP-201ENST00000238688 C16orf87Q6PH81 154 aa11.64□□□□□ -0.55
SLIRP-201ENST00000238688 LRRN1Q6UXK5 716 aa11.64□□□□□ -0.55
SLIRP-201ENST00000238688 GFRALQ6UXV0 394 aa11.64□□□□□ -0.55
SLIRP-201ENST00000238688 RPTNQ6XPR3 784 aa11.64□□□□□ -0.55
SLIRP-201ENST00000238688 AAED1Q7RTV5 226 aa11.64□□□□□ -0.55
SLIRP-201ENST00000238688 ABHD12BQ7Z5M8 362 aaPredicted RBP11.64□□□□□ -0.55
SLIRP-201ENST00000238688 FJX1Q86VR8 437 aa11.64□□□□□ -0.55
SLIRP-201ENST00000238688 CATSPERDQ86XM0 798 aa11.64□□□□□ -0.55
SLIRP-201ENST00000238688 ZNF676Q8N7Q3 588 aa11.64□□□□□ -0.55
SLIRP-201ENST00000238688 RNF166Q96A37 237 aaPredicted RBP11.64□□□□□ -0.55
SLIRP-201ENST00000238688 BARHL1Q9BZE3 327 aa11.64□□□□□ -0.55
SLIRP-201ENST00000238688 RNF167Q9H6Y7 350 aa11.64□□□□□ -0.55
SLIRP-201ENST00000238688 SP140LQ9H930 580 aa11.64□□□□□ -0.55
SLIRP-201ENST00000238688 FRRS1LQ9P0K9 344 aa11.64□□□□□ -0.55
SLIRP-201ENST00000238688 GDF2Q9UK05 429 aaPredicted RBP11.64□□□□□ -0.55
SLIRP-201ENST00000238688 CMAHPQ9Y471 501 aa11.64□□□□□ -0.55
SLIRP-201ENST00000238688 TRBV5-7A0A0A0MS05 114 aa11.63□□□□□ -0.55
SLIRP-201ENST00000238688 A0A1W2PPL8 197 aa11.63□□□□□ -0.55
SLIRP-201ENST00000238688 MEGF11A6BM72 1044 aa11.63□□□□□ -0.55
SLIRP-201ENST00000238688 OR14I1A6ND48 311 aa11.63□□□□□ -0.55
SLIRP-201ENST00000238688 FAM166BA8MTA8 275 aa11.63□□□□□ -0.55
SLIRP-201ENST00000238688 PRR32B1ATL7 298 aa11.63□□□□□ -0.55
SLIRP-201ENST00000238688 AQP7O14520 342 aa11.63□□□□□ -0.55
SLIRP-201ENST00000238688 TFECO14948 347 aaPredicted RBP11.63□□□□□ -0.55
SLIRP-201ENST00000238688 SRSF10O75494 262 aaKnown RBP11.63□□□□□ -0.55
SLIRP-201ENST00000238688 CRYABP02511 175 aaKnown RBP11.63□□□□□ -0.55
SLIRP-201ENST00000238688 CST2P09228 141 aa11.63□□□□□ -0.55
SLIRP-201ENST00000238688 BMP4P12644 408 aa11.63□□□□□ -0.55
SLIRP-201ENST00000238688 FSTP19883 344 aa11.63□□□□□ -0.55
SLIRP-201ENST00000238688 APEX1P27695 318 aaKnown RBP11.63□□□□□ -0.55
SLIRP-201ENST00000238688 NANOS3P60323 173 aaKnown RBP11.63□□□□□ -0.55
SLIRP-201ENST00000238688 PSMA6P60900 246 aaKnown RBP11.63□□□□□ -0.55
SLIRP-201ENST00000238688 HIST1H3AP68431 136 aa11.63□□□□□ -0.55
SLIRP-201ENST00000238688 ZNF181Q2M3W8 571 aa11.63□□□□□ -0.55
SLIRP-201ENST00000238688 RNFT1Q5M7Z0 435 aa11.63□□□□□ -0.55
SLIRP-201ENST00000238688 HIST2H3PS2Q5TEC6 136 aa11.63□□□□□ -0.55
SLIRP-201ENST00000238688 HIST2H3AQ71DI3 136 aa11.63□□□□□ -0.55
SLIRP-201ENST00000238688 ZNF627Q7L945 461 aa11.63□□□□□ -0.55
SLIRP-201ENST00000238688 PNPLA5Q7Z6Z6 429 aaPredicted RBP11.63□□□□□ -0.55
SLIRP-201ENST00000238688 SIAH3Q8IW03 269 aa11.63□□□□□ -0.55
SLIRP-201ENST00000238688 UBQLNLQ8IYU4 475 aa11.63□□□□□ -0.55
SLIRP-201ENST00000238688 SLAMF6Q96DU3 332 aa11.63□□□□□ -0.55
SLIRP-201ENST00000238688 ZNF385AQ96PM9 386 aaKnown RBP11.63□□□□□ -0.55
SLIRP-201ENST00000238688 DERL3Q96Q80 235 aa11.63□□□□□ -0.55
SLIRP-201ENST00000238688 PRDM14Q9GZV8 571 aa11.63□□□□□ -0.55
SLIRP-201ENST00000238688 LDAHQ9H6V9 325 aa11.63□□□□□ -0.55
SLIRP-201ENST00000238688 CKLFQ9UBR5 152 aa11.63□□□□□ -0.55
SLIRP-201ENST00000238688 NUFIP1Q9UHK0 495 aaKnown RBP11.63□□□□□ -0.55
SLIRP-201ENST00000238688 HHLA2Q9UM44 414 aa11.63□□□□□ -0.55
SLIRP-201ENST00000238688 GRIP1Q9Y3R0 1128 aa11.63□□□□□ -0.55
SLIRP-201ENST00000238688 LHFPL6Q9Y693 200 aa11.63□□□□□ -0.55
SLIRP-201ENST00000238688 PHF3Q92576 2039 aaKnown RBP11.62□□□□□ -0.55
SLIRP-201ENST00000238688 IGKV1D-43A0A0B4J1Z2 117 aa11.62□□□□□ -0.55
SLIRP-201ENST00000238688 A0A1B0GUH1 482 aa11.62□□□□□ -0.55
SLIRP-201ENST00000238688 MRPL33O75394 65 aaKnown RBP11.62□□□□□ -0.55
SLIRP-201ENST00000238688 RPP14O95059 124 aaKnown RBP11.62□□□□□ -0.55
SLIRP-201ENST00000238688 OCM2P0CE71 109 aa11.62□□□□□ -0.55
SLIRP-201ENST00000238688 SRMP19623 302 aa11.62□□□□□ -0.55
SLIRP-201ENST00000238688 SCRN3Q0VDG4 424 aa11.62□□□□□ -0.55
SLIRP-201ENST00000238688 RIN1Q13671 783 aa11.62□□□□□ -0.55
SLIRP-201ENST00000238688 SFXN4Q6P4A7 337 aa11.62□□□□□ -0.55
SLIRP-201ENST00000238688 BAIAP2L2Q6UXY1 529 aa11.62□□□□□ -0.55
SLIRP-201ENST00000238688 LRRC28Q86X40 367 aaPredicted RBP11.62□□□□□ -0.55
SLIRP-201ENST00000238688 MCEMP1Q8IX19 187 aa11.62□□□□□ -0.55
SLIRP-201ENST00000238688 SMAP2Q8WU79 429 aaPredicted RBP11.62□□□□□ -0.55
SLIRP-201ENST00000238688 SARAFQ96BY9 339 aa11.62□□□□□ -0.55
SLIRP-201ENST00000238688 PDCD1LG2Q9BQ51 273 aa11.62□□□□□ -0.55
SLIRP-201ENST00000238688 HDHD2Q9H0R4 259 aa11.62□□□□□ -0.55
SLIRP-201ENST00000238688 SLC6A15Q9H2J7 730 aa11.62□□□□□ -0.55
SLIRP-201ENST00000238688 SLCO5A1Q9H2Y9 848 aa11.62□□□□□ -0.55
SLIRP-201ENST00000238688 TPK1Q9H3S4 243 aa11.62□□□□□ -0.55
SLIRP-201ENST00000238688 SEC61A2Q9H9S3 476 aa11.62□□□□□ -0.55
SLIRP-201ENST00000238688 PLSCR2Q9NRY7 297 aa11.62□□□□□ -0.55
SLIRP-201ENST00000238688 ZNF391Q9UJN7 358 aa11.62□□□□□ -0.55
SLIRP-201ENST00000238688 FOXJ3Q9UPW0 622 aa11.62□□□□□ -0.55
SLIRP-201ENST00000238688 ZNF835Q9Y2P0 537 aa11.62□□□□□ -0.55
SLIRP-201ENST00000238688 NOSIPQ9Y314 301 aaKnown RBP11.62□□□□□ -0.55
SLIRP-201ENST00000238688 TMEM269A0A1B0GVZ9 245 aa11.61□□□□□ -0.55
SLIRP-201ENST00000238688 RGS5O15539 181 aa11.61□□□□□ -0.55
SLIRP-201ENST00000238688 ZNHIT1O43257 154 aa11.61□□□□□ -0.55
SLIRP-201ENST00000238688 FARS2O95363 451 aaKnown RBP11.61□□□□□ -0.55
SLIRP-201ENST00000238688 CNOT4O95628 575 aaKnown RBP11.61□□□□□ -0.55
SLIRP-201ENST00000238688 YES1P07947 543 aa11.61□□□□□ -0.55
SLIRP-201ENST00000238688 HSD11B1P28845 292 aa11.61□□□□□ -0.55
SLIRP-201ENST00000238688 PSMB10P40306 273 aa11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 129 ms