RNA–Protein interactions for RNA: ENST00000224237.9

VIM-201, Transcript of vimentin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VIM, Length 1,868 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-201ENST00000224237 ORAI1Q96D31 301 aa15.97■□□□□ 0.15
VIM-201ENST00000224237 FOXB1Q99853 325 aa15.97■□□□□ 0.15
VIM-201ENST00000224237 CALHM2Q9HA72 323 aa15.97■□□□□ 0.15
VIM-201ENST00000224237 GPR35Q9HC97 309 aa15.97■□□□□ 0.15
VIM-201ENST00000224237 ADAM30Q9UKF2 790 aa15.97■□□□□ 0.15
VIM-201ENST00000224237 HHLA2Q9UM44 414 aa15.97■□□□□ 0.15
VIM-201ENST00000224237 DHDHQ9UQ10 334 aa15.97■□□□□ 0.15
VIM-201ENST00000224237 AK6Q9Y3D8 172 aaKnown RBP15.97■□□□□ 0.15
VIM-201ENST00000224237 ZNF175Q9Y473 711 aa15.97■□□□□ 0.15
VIM-201ENST00000224237 CACNA1GO43497 2377 aa15.97■□□□□ 0.15
VIM-201ENST00000224237 AQP7O14520 342 aa15.97■□□□□ 0.15
VIM-201ENST00000224237 CD2P06729 351 aa15.97■□□□□ 0.15
VIM-201ENST00000224237 EPXP11678 715 aa15.97■□□□□ 0.15
VIM-201ENST00000224237 FCGR2AP12318 317 aa15.97■□□□□ 0.15
VIM-201ENST00000224237 THBS2P35442 1172 aa15.97■□□□□ 0.15
VIM-201ENST00000224237 HIST1H3AP68431 136 aa15.97■□□□□ 0.15
VIM-201ENST00000224237 ZNF181Q2M3W8 571 aa15.97■□□□□ 0.15
VIM-201ENST00000224237 SLC25A35Q3KQZ1 300 aa15.97■□□□□ 0.15
VIM-201ENST00000224237 HIST2H3PS2Q5TEC6 136 aa15.97■□□□□ 0.15
VIM-201ENST00000224237 TSPO2Q5TGU0 170 aa15.97■□□□□ 0.15
VIM-201ENST00000224237 Q6ZS92 163 aa15.97■□□□□ 0.15
VIM-201ENST00000224237 HIST2H3AQ71DI3 136 aa15.97■□□□□ 0.15
VIM-201ENST00000224237 ZC3HAV1Q7Z2W4 902 aaKnown RBP15.97■□□□□ 0.15
VIM-201ENST00000224237 DIRAS2Q96HU8 199 aa15.97■□□□□ 0.15
VIM-201ENST00000224237 SLC25A18Q9H1K4 315 aa15.97■□□□□ 0.15
VIM-201ENST00000224237 V9GYH0 126 aa15.97■□□□□ 0.15
VIM-201ENST00000224237 ANKRD61A6NGH8 418 aa15.96■□□□□ 0.15
VIM-201ENST00000224237 SLC22A20A6NK97 555 aa15.96■□□□□ 0.15
VIM-201ENST00000224237 TMEM127O75204 238 aa15.96■□□□□ 0.15
VIM-201ENST00000224237 CST2P09228 141 aa15.96■□□□□ 0.15
VIM-201ENST00000224237 STK11Q15831 433 aa15.96■□□□□ 0.15
VIM-201ENST00000224237 NRN1LQ496H8 165 aa15.96■□□□□ 0.15
VIM-201ENST00000224237 STAC2Q6ZMT1 411 aa15.96■□□□□ 0.15
VIM-201ENST00000224237 ELMOD2Q8IZ81 293 aa15.96■□□□□ 0.15
VIM-201ENST00000224237 ASB5Q8WWX0 329 aa15.96■□□□□ 0.15
VIM-201ENST00000224237 PBOV1Q9GZY1 135 aa15.96■□□□□ 0.15
VIM-201ENST00000224237 GP6Q9HCN6 339 aa15.96■□□□□ 0.15
VIM-201ENST00000224237 BRD7Q9NPI1 651 aa15.96■□□□□ 0.15
VIM-201ENST00000224237 NUFIP1Q9UHK0 495 aaKnown RBP15.96■□□□□ 0.15
VIM-201ENST00000224237 CLEC4AQ9UMR7 237 aa15.96■□□□□ 0.15
VIM-201ENST00000224237 LOC107986453A0A1B0GWG9 222 aa15.95■□□□□ 0.14
VIM-201ENST00000224237 H3BSH0 61 aa15.95■□□□□ 0.14
VIM-201ENST00000224237 ZNHIT1O43257 154 aa15.95■□□□□ 0.14
VIM-201ENST00000224237 HPGDSO60760 199 aa15.95■□□□□ 0.14
VIM-201ENST00000224237 SLC19A2O60779 497 aa15.95■□□□□ 0.14
VIM-201ENST00000224237 UPK1BO75841 260 aa15.95■□□□□ 0.14
VIM-201ENST00000224237 APEX1P27695 318 aaKnown RBP15.95■□□□□ 0.14
VIM-201ENST00000224237 KCNJ15Q99712 375 aa15.95■□□□□ 0.14
VIM-201ENST00000224237 ABRACLQ9P1F3 81 aa15.95■□□□□ 0.14
VIM-201ENST00000224237 DKK4Q9UBT3 224 aa15.95■□□□□ 0.14
VIM-201ENST00000224237 SLC5A6Q9Y289 635 aa15.95■□□□□ 0.14
VIM-201ENST00000224237 ATMQ13315 3056 aa15.95■□□□□ 0.14
VIM-201ENST00000224237 FUOMA2VDF0 154 aa15.95■□□□□ 0.14
VIM-201ENST00000224237 MKRN2OSH3BPM6 223 aa15.95■□□□□ 0.14
VIM-201ENST00000224237 RPL36A-HNRNPH2H7BZ11 118 aa15.95■□□□□ 0.14
VIM-201ENST00000224237 TTRP02766 147 aa15.95■□□□□ 0.14
VIM-201ENST00000224237 B4GALT1P15291 398 aa15.95■□□□□ 0.14
VIM-201ENST00000224237 CTSSP25774 331 aa15.95■□□□□ 0.14
VIM-201ENST00000224237 CX3CR1P49238 355 aa15.95■□□□□ 0.14
VIM-201ENST00000224237 ELFN2Q5R3F8 820 aa15.95■□□□□ 0.14
VIM-201ENST00000224237 ZNF554Q86TJ5 538 aa15.95■□□□□ 0.14
VIM-201ENST00000224237 SLC22A24Q8N4F4 322 aa15.95■□□□□ 0.14
VIM-201ENST00000224237 APH1AQ96BI3 265 aa15.95■□□□□ 0.14
VIM-201ENST00000224237 SARAFQ96BY9 339 aa15.95■□□□□ 0.14
VIM-201ENST00000224237 FBXO17Q96EF6 278 aa15.95■□□□□ 0.14
VIM-201ENST00000224237 CCDC32Q9BV29 185 aa15.95■□□□□ 0.14
VIM-201ENST00000224237 PLSCR2Q9NRY7 297 aa15.95■□□□□ 0.14
VIM-201ENST00000224237 SLC7A10Q9NS82 523 aa15.95■□□□□ 0.14
VIM-201ENST00000224237 V9GY05 133 aa15.95■□□□□ 0.14
VIM-201ENST00000224237 NCOA6Q14686 2063 aaPredicted RBP15.94■□□□□ 0.14
VIM-201ENST00000224237 FABP12A6NFH5 140 aa15.94■□□□□ 0.14
VIM-201ENST00000224237 ZNF587BE7ETH6 402 aa15.94■□□□□ 0.14
VIM-201ENST00000224237 AIPO00170 330 aa15.94■□□□□ 0.14
VIM-201ENST00000224237 TGM6O95932 706 aa15.94■□□□□ 0.14
VIM-201ENST00000224237 ATF1P18846 271 aa15.94■□□□□ 0.14
VIM-201ENST00000224237 PSMD7P51665 324 aa15.94■□□□□ 0.14
VIM-201ENST00000224237 PRKXP51817 358 aa15.94■□□□□ 0.14
VIM-201ENST00000224237 ZNF121P58317 390 aaPredicted RBP15.94■□□□□ 0.14
VIM-201ENST00000224237 SCRN3Q0VDG4 424 aa15.94■□□□□ 0.14
VIM-201ENST00000224237 CCDC92Q53HC0 331 aaPredicted RBP15.94■□□□□ 0.14
VIM-201ENST00000224237 FAM131AQ6UXB0 335 aa15.94■□□□□ 0.14
VIM-201ENST00000224237 SIAH3Q8IW03 269 aa15.94■□□□□ 0.14
VIM-201ENST00000224237 ZNF433Q8N7K0 673 aaPredicted RBP15.94■□□□□ 0.14
VIM-201ENST00000224237 ZNF283Q8N7M2 679 aa15.94■□□□□ 0.14
VIM-201ENST00000224237 OR13C3Q8NGS6 347 aa15.94■□□□□ 0.14
VIM-201ENST00000224237 TRMT10AQ8TBZ6 339 aaKnown RBP15.94■□□□□ 0.14
VIM-201ENST00000224237 TAAR6Q96RI8 345 aa15.94■□□□□ 0.14
VIM-201ENST00000224237 PLEK2Q9NYT0 353 aa15.94■□□□□ 0.14
VIM-201ENST00000224237 TRAV8-7A0A075B6U6 113 aa15.93■□□□□ 0.14
VIM-201ENST00000224237 TBX1O43435 398 aa15.93■□□□□ 0.14
VIM-201ENST00000224237 FARS2O95363 451 aaKnown RBP15.93■□□□□ 0.14
VIM-201ENST00000224237 IGHV3-9P01782 118 aa15.93■□□□□ 0.14
VIM-201ENST00000224237 ACSM4P0C7M7 580 aa15.93■□□□□ 0.14
VIM-201ENST00000224237 SLC2A2P11168 524 aaPredicted RBP15.93■□□□□ 0.14
VIM-201ENST00000224237 BCAP31P51572 246 aa15.93■□□□□ 0.14
VIM-201ENST00000224237 ADGRE4PQ86SQ3 457 aa15.93■□□□□ 0.14
VIM-201ENST00000224237 LUZP2Q86TE4 346 aa15.93■□□□□ 0.14
VIM-201ENST00000224237 LRRTM1Q86UE6 522 aa15.93■□□□□ 0.14
VIM-201ENST00000224237 LRRC28Q86X40 367 aaPredicted RBP15.93■□□□□ 0.14
VIM-201ENST00000224237 SNX29P2Q8IUI4 249 aa15.93■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 58.5 ms