RNA–Protein interactions for RNA: ENST00000625244.2

SNX1-214, Transcript of sorting nexin 1, humanhuman

TSL 5 BASIC

Gene SNX1, Length 324 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-214ENST00000625244 THUMPD1Q9NXG2 353 aaKnown RBP11.44□□□□□ -0.58
SNX1-214ENST00000625244 ZNRD1Q9P1U0 126 aa11.44□□□□□ -0.58
SNX1-214ENST00000625244 FAM96BQ9Y3D0 163 aa11.44□□□□□ -0.58
SNX1-214ENST00000625244 U3KQK5 164 aa11.44□□□□□ -0.58
SNX1-214ENST00000625244 A0A1B0GWA3 101 aa11.43□□□□□ -0.58
SNX1-214ENST00000625244 BTBD17A6NE02 478 aa11.43□□□□□ -0.58
SNX1-214ENST00000625244 VSIG10L2P0DP72 767 aa11.43□□□□□ -0.58
SNX1-214ENST00000625244 CRATP43155 626 aa11.43□□□□□ -0.58
SNX1-214ENST00000625244 GDI2P50395 445 aaKnown RBP11.43□□□□□ -0.58
SNX1-214ENST00000625244 EMX1Q04741 257 aaPredicted RBP11.43□□□□□ -0.58
SNX1-214ENST00000625244 MELKQ14680 651 aa11.43□□□□□ -0.58
SNX1-214ENST00000625244 RPS26P11Q5JNZ5 115 aaPredicted RBP11.43□□□□□ -0.58
SNX1-214ENST00000625244 CASC10Q5T4H9 136 aa11.43□□□□□ -0.58
SNX1-214ENST00000625244 METTL11BQ5VVY1 283 aa11.43□□□□□ -0.58
SNX1-214ENST00000625244 SLC35D2Q76EJ3 337 aa11.43□□□□□ -0.58
SNX1-214ENST00000625244 DHDDSQ86SQ9 333 aa11.43□□□□□ -0.58
SNX1-214ENST00000625244 WFDC9Q8NEX5 89 aa11.43□□□□□ -0.58
SNX1-214ENST00000625244 OR4F17Q8NGA8 305 aa11.43□□□□□ -0.58
SNX1-214ENST00000625244 OR6S1Q8NH40 331 aa11.43□□□□□ -0.58
SNX1-214ENST00000625244 VANGL1Q8TAA9 524 aaPredicted RBP11.43□□□□□ -0.58
SNX1-214ENST00000625244 CMTM5Q96DZ9 223 aa11.43□□□□□ -0.58
SNX1-214ENST00000625244 SLC25A44Q96H78 314 aaPredicted RBP11.43□□□□□ -0.58
SNX1-214ENST00000625244 OR4F4Q96R69 305 aa11.43□□□□□ -0.58
SNX1-214ENST00000625244 POFUT1Q9H488 388 aa11.43□□□□□ -0.58
SNX1-214ENST00000625244 CACYBPQ9HB71 228 aaKnown RBP11.43□□□□□ -0.58
SNX1-214ENST00000625244 MAN2C1Q9NTJ4 1040 aa11.43□□□□□ -0.58
SNX1-214ENST00000625244 GID8Q9NWU2 228 aa11.43□□□□□ -0.58
SNX1-214ENST00000625244 RPS6KB2Q9UBS0 482 aa11.43□□□□□ -0.58
SNX1-214ENST00000625244 ADARB2-AS1A8MUL3 147 aa11.42□□□□□ -0.58
SNX1-214ENST00000625244 CLIC1O00299 241 aa11.42□□□□□ -0.58
SNX1-214ENST00000625244 SURF4O15260 269 aa11.42□□□□□ -0.58
SNX1-214ENST00000625244 ICMTO60725 284 aa11.42□□□□□ -0.58
SNX1-214ENST00000625244 PGA4P0DJD7 388 aa11.42□□□□□ -0.58
SNX1-214ENST00000625244 PGA3P0DJD8 388 aa11.42□□□□□ -0.58
SNX1-214ENST00000625244 ZNF32P17041 273 aa11.42□□□□□ -0.58
SNX1-214ENST00000625244 CD33P20138 364 aa11.42□□□□□ -0.58
SNX1-214ENST00000625244 HTR2AP28223 471 aa11.42□□□□□ -0.58
SNX1-214ENST00000625244 KIR2DS4P43632 304 aa11.42□□□□□ -0.58
SNX1-214ENST00000625244 PSG4Q00888 419 aa11.42□□□□□ -0.58
SNX1-214ENST00000625244 FADDQ13158 208 aa11.42□□□□□ -0.58
SNX1-214ENST00000625244 COQ5Q5HYK3 327 aa11.42□□□□□ -0.58
SNX1-214ENST00000625244 ALG10BQ5I7T1 473 aa11.42□□□□□ -0.58
SNX1-214ENST00000625244 PAGE3Q5JUK9 113 aa11.42□□□□□ -0.58
SNX1-214ENST00000625244 LRIF1Q5T3J3 769 aa11.42□□□□□ -0.58
SNX1-214ENST00000625244 C11orf88Q6PI97 169 aa11.42□□□□□ -0.58
SNX1-214ENST00000625244 PIGWQ7Z7B1 504 aa11.42□□□□□ -0.58
SNX1-214ENST00000625244 ZER1Q7Z7L7 766 aa11.42□□□□□ -0.58
SNX1-214ENST00000625244 CCDC197Q8NCU1 140 aa11.42□□□□□ -0.58
SNX1-214ENST00000625244 RP9Q8TA86 221 aaKnown RBP11.42□□□□□ -0.58
SNX1-214ENST00000625244 MCHR2Q969V1 340 aa11.42□□□□□ -0.58
SNX1-214ENST00000625244 SH3GL1Q99961 368 aa11.42□□□□□ -0.58
SNX1-214ENST00000625244 PAIP1Q9H074 479 aaKnown RBP11.42□□□□□ -0.58
SNX1-214ENST00000625244 P2RX2Q9UBL9 471 aa11.42□□□□□ -0.58
SNX1-214ENST00000625244 PLECQ15149 4684 aaKnown RBP11.41□□□□□ -0.58
SNX1-214ENST00000625244 IGHV3-64DA0A0J9YX35 117 aa11.41□□□□□ -0.58
SNX1-214ENST00000625244 IFNL4K9M1U5 179 aa11.41□□□□□ -0.58
SNX1-214ENST00000625244 NDUFAB1O14561 156 aa11.41□□□□□ -0.58
SNX1-214ENST00000625244 MRASO14807 208 aa11.41□□□□□ -0.58
SNX1-214ENST00000625244 NPPAP01160 153 aa11.41□□□□□ -0.58
SNX1-214ENST00000625244 LIPFP07098 398 aa11.41□□□□□ -0.58
SNX1-214ENST00000625244 ADORA3P0DMS8 318 aa11.41□□□□□ -0.58
SNX1-214ENST00000625244 CD28P10747 220 aa11.41□□□□□ -0.58
SNX1-214ENST00000625244 DSTNP60981 165 aa11.41□□□□□ -0.58
SNX1-214ENST00000625244 DPP10Q8N608 796 aa11.41□□□□□ -0.58
SNX1-214ENST00000625244 C10orf53Q8N6V4 93 aa11.41□□□□□ -0.58
SNX1-214ENST00000625244 LSMEM1Q8N8F7 131 aa11.41□□□□□ -0.58
SNX1-214ENST00000625244 C19orf18Q8NEA5 215 aa11.41□□□□□ -0.58
SNX1-214ENST00000625244 C4orf45Q96LM5 186 aa11.41□□□□□ -0.58
SNX1-214ENST00000625244 TECTBQ96PL2 329 aa11.41□□□□□ -0.58
SNX1-214ENST00000625244 ZNF347Q96SE7 839 aa11.41□□□□□ -0.58
SNX1-214ENST00000625244 ZNF607Q96SK3 696 aa11.41□□□□□ -0.58
SNX1-214ENST00000625244 CNTD2Q9H8S5 307 aa11.41□□□□□ -0.58
SNX1-214ENST00000625244 CCNB1IP1Q9NPC3 277 aa11.41□□□□□ -0.58
SNX1-214ENST00000625244 CALML5Q9NZT1 146 aa11.41□□□□□ -0.58
SNX1-214ENST00000625244 ZNF232Q9UNY5 417 aa11.41□□□□□ -0.58
SNX1-214ENST00000625244 LCE6AA0A183 80 aa11.4□□□□□ -0.58
SNX1-214ENST00000625244 C5orf58C9J3I9 102 aa11.4□□□□□ -0.58
SNX1-214ENST00000625244 FBXO24O75426 580 aa11.4□□□□□ -0.58
SNX1-214ENST00000625244 FSTL3O95633 263 aa11.4□□□□□ -0.58
SNX1-214ENST00000625244 OPN1SWP03999 348 aa11.4□□□□□ -0.58
SNX1-214ENST00000625244 BCHEP06276 602 aa11.4□□□□□ -0.58
SNX1-214ENST00000625244 FBP1P09467 338 aa11.4□□□□□ -0.58
SNX1-214ENST00000625244 KITLGP21583 273 aa11.4□□□□□ -0.58
SNX1-214ENST00000625244 CDAP32320 146 aa11.4□□□□□ -0.58
SNX1-214ENST00000625244 PSMB10P40306 273 aa11.4□□□□□ -0.58
SNX1-214ENST00000625244 PMELP40967 661 aa11.4□□□□□ -0.58
SNX1-214ENST00000625244 ERFP50548 548 aa11.4□□□□□ -0.58
SNX1-214ENST00000625244 ARHGDIAP52565 204 aa11.4□□□□□ -0.58
SNX1-214ENST00000625244 CRISP3P54108 245 aa11.4□□□□□ -0.58
SNX1-214ENST00000625244 ARF6P62330 175 aa11.4□□□□□ -0.58
SNX1-214ENST00000625244 TAF11Q15544 211 aa11.4□□□□□ -0.58
SNX1-214ENST00000625244 HIST3H3Q16695 136 aa11.4□□□□□ -0.58
SNX1-214ENST00000625244 GTDC1Q4AE62 458 aa11.4□□□□□ -0.58
SNX1-214ENST00000625244 CD276Q5ZPR3 534 aa11.4□□□□□ -0.58
SNX1-214ENST00000625244 DCDC5Q6ZRR9 648 aa11.4□□□□□ -0.58
SNX1-214ENST00000625244 MOGAT3Q86VF5 341 aa11.4□□□□□ -0.58
SNX1-214ENST00000625244 NDUFA11Q86Y39 141 aa11.4□□□□□ -0.58
SNX1-214ENST00000625244 ATG16L2Q8NAA4 619 aa11.4□□□□□ -0.58
SNX1-214ENST00000625244 OR5J2Q8NH18 312 aa11.4□□□□□ -0.58
SNX1-214ENST00000625244 BCAS4Q8TDM0 211 aa11.4□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms