RNA–Protein interactions for RNA: ENST00000606782.1

CTSA-213, Transcript of cathepsin A, humanhuman

TSL 3

Gene CTSA, Length 582 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-213ENST00000606782 C1orf159Q96HA4 380 aa11.47□□□□□ -0.57
CTSA-213ENST00000606782 RBP7Q96R05 134 aa11.47□□□□□ -0.57
CTSA-213ENST00000606782 MS4A5Q9H3V2 200 aa11.47□□□□□ -0.57
CTSA-213ENST00000606782 CUBNO60494 3623 aa11.47□□□□□ -0.57
CTSA-213ENST00000606782 LOC100289279A0A1B0GTE1 492 aa11.46□□□□□ -0.57
CTSA-213ENST00000606782 OR6C68A6NDL8 312 aa11.46□□□□□ -0.57
CTSA-213ENST00000606782 SNAP29O95721 258 aa11.46□□□□□ -0.57
CTSA-213ENST00000606782 ADRA2AP08913 450 aa11.46□□□□□ -0.57
CTSA-213ENST00000606782 KHDRBS1Q07666 443 aaKnown RBP eCLIP11.46□□□□□ -0.57
CTSA-213ENST00000606782 RAB39AQ14964 217 aa11.46□□□□□ -0.57
CTSA-213ENST00000606782 CARTPTQ16568 116 aa11.46□□□□□ -0.57
CTSA-213ENST00000606782 ZIK1Q3SY52 487 aaPredicted RBP11.46□□□□□ -0.57
CTSA-213ENST00000606782 SLX4IPQ5VYV7 408 aa11.46□□□□□ -0.57
CTSA-213ENST00000606782 FAM166AQ6J272 317 aa11.46□□□□□ -0.57
CTSA-213ENST00000606782 IQCF1Q8N6M8 205 aa11.46□□□□□ -0.57
CTSA-213ENST00000606782 NOXO1Q8NFA2 376 aa11.46□□□□□ -0.57
CTSA-213ENST00000606782 OR52E2Q8NGJ4 325 aa11.46□□□□□ -0.57
CTSA-213ENST00000606782 TMEM158Q8WZ71 300 aa11.46□□□□□ -0.57
CTSA-213ENST00000606782 HRASLS5Q96KN8 279 aa11.46□□□□□ -0.57
CTSA-213ENST00000606782 RDH12Q96NR8 316 aa11.46□□□□□ -0.57
CTSA-213ENST00000606782 MBOAT4Q96T53 435 aa11.46□□□□□ -0.57
CTSA-213ENST00000606782 NMNAT3Q96T66 252 aa11.46□□□□□ -0.57
CTSA-213ENST00000606782 SHARPINQ9H0F6 387 aa11.46□□□□□ -0.57
CTSA-213ENST00000606782 TOR3AQ9H497 397 aa11.46□□□□□ -0.57
CTSA-213ENST00000606782 DYNLRB1Q9NP97 96 aa11.46□□□□□ -0.57
CTSA-213ENST00000606782 CMC2Q9NRP2 79 aa11.46□□□□□ -0.57
CTSA-213ENST00000606782 KLHL21Q9UJP4 597 aa11.46□□□□□ -0.57
CTSA-213ENST00000606782 KCNS2Q9ULS6 477 aa11.46□□□□□ -0.57
CTSA-213ENST00000606782 ORC6Q9Y5N6 252 aa11.46□□□□□ -0.57
CTSA-213ENST00000606782 H0YJX3 145 aa11.45□□□□□ -0.58
CTSA-213ENST00000606782 M0R233 179 aa11.45□□□□□ -0.58
CTSA-213ENST00000606782 SURF4O15260 269 aa11.45□□□□□ -0.58
CTSA-213ENST00000606782 SLC16A6O15403 523 aa11.45□□□□□ -0.58
CTSA-213ENST00000606782 FARS2O95363 451 aaKnown RBP11.45□□□□□ -0.58
CTSA-213ENST00000606782 SLC2A10O95528 541 aa11.45□□□□□ -0.58
CTSA-213ENST00000606782 PATE4P0C8F1 98 aa11.45□□□□□ -0.58
CTSA-213ENST00000606782 NR2C1P13056 603 aa11.45□□□□□ -0.58
CTSA-213ENST00000606782 MRPS11P82912 194 aaKnown RBP11.45□□□□□ -0.58
CTSA-213ENST00000606782 C10orf128Q5T292 105 aa11.45□□□□□ -0.58
CTSA-213ENST00000606782 C12orf73Q69YU5 71 aa11.45□□□□□ -0.58
CTSA-213ENST00000606782 LEG1Q6P5S2 330 aa11.45□□□□□ -0.58
CTSA-213ENST00000606782 SLC37A3Q8NCC5 494 aa11.45□□□□□ -0.58
CTSA-213ENST00000606782 PTP4A1Q93096 173 aa11.45□□□□□ -0.58
CTSA-213ENST00000606782 SOX7Q9BT81 388 aa11.45□□□□□ -0.58
CTSA-213ENST00000606782 TEX12Q9BXU0 123 aa11.45□□□□□ -0.58
CTSA-213ENST00000606782 NMNAT2Q9BZQ4 307 aa11.45□□□□□ -0.58
CTSA-213ENST00000606782 C1orf198Q9H425 327 aa11.45□□□□□ -0.58
CTSA-213ENST00000606782 RIBC2Q9H4K1 309 aa11.45□□□□□ -0.58
CTSA-213ENST00000606782 FAM118AQ9NWS6 357 aa11.45□□□□□ -0.58
CTSA-213ENST00000606782 SMPD3Q9NY59 655 aaPredicted RBP11.45□□□□□ -0.58
CTSA-213ENST00000606782 NDRG4Q9ULP0 352 aaKnown RBP11.45□□□□□ -0.58
CTSA-213ENST00000606782 B9D1Q9UPM9 204 aa11.45□□□□□ -0.58
CTSA-213ENST00000606782 SVEP1Q4LDE5 3571 aa11.44□□□□□ -0.58
CTSA-213ENST00000606782 IGKV1D-43A0A0B4J1Z2 117 aa11.44□□□□□ -0.58
CTSA-213ENST00000606782 RNF212BA8MTL3 300 aa11.44□□□□□ -0.58
CTSA-213ENST00000606782 IFNGP01579 166 aa11.44□□□□□ -0.58
CTSA-213ENST00000606782 MMP7P09237 267 aaPredicted RBP11.44□□□□□ -0.58
CTSA-213ENST00000606782 ZNF250P15622 560 aa11.44□□□□□ -0.58
CTSA-213ENST00000606782 CHN2P52757 468 aa11.44□□□□□ -0.58
CTSA-213ENST00000606782 GALK2Q01415 458 aa11.44□□□□□ -0.58
CTSA-213ENST00000606782 SLC36A2Q495M3 483 aa11.44□□□□□ -0.58
CTSA-213ENST00000606782 ELFN2Q5R3F8 820 aa11.44□□□□□ -0.58
CTSA-213ENST00000606782 FAM120AOSQ5T036 256 aa11.44□□□□□ -0.58
CTSA-213ENST00000606782 UGT2A3Q6UWM9 527 aa11.44□□□□□ -0.58
CTSA-213ENST00000606782 ZBTB46Q86UZ6 589 aa11.44□□□□□ -0.58
CTSA-213ENST00000606782 LRP11Q86VZ4 500 aa11.44□□□□□ -0.58
CTSA-213ENST00000606782 JAZF1Q86VZ6 243 aa11.44□□□□□ -0.58
CTSA-213ENST00000606782 OR6V1Q8N148 313 aa11.44□□□□□ -0.58
CTSA-213ENST00000606782 SH3GL3Q99963 347 aa11.44□□□□□ -0.58
CTSA-213ENST00000606782 NUAK2Q9H093 628 aa11.44□□□□□ -0.58
CTSA-213ENST00000606782 TVP23BQ9NYZ1 205 aa11.44□□□□□ -0.58
CTSA-213ENST00000606782 IGLV3-9A0A075B6K5 115 aa11.43□□□□□ -0.58
CTSA-213ENST00000606782 LOC100130705A0A1B0GUX0 176 aa11.43□□□□□ -0.58
CTSA-213ENST00000606782 LRP5LA4QPB2 252 aa11.43□□□□□ -0.58
CTSA-213ENST00000606782 H7C1C5 153 aa11.43□□□□□ -0.58
CTSA-213ENST00000606782 DCTN6O00399 190 aa11.43□□□□□ -0.58
CTSA-213ENST00000606782 PHF1O43189 567 aaPredicted RBP11.43□□□□□ -0.58
CTSA-213ENST00000606782 RENP00797 406 aa11.43□□□□□ -0.58
CTSA-213ENST00000606782 TGFAP01135 160 aa11.43□□□□□ -0.58
CTSA-213ENST00000606782 PTHP01270 115 aa11.43□□□□□ -0.58
CTSA-213ENST00000606782 CTLA4P16410 223 aa11.43□□□□□ -0.58
CTSA-213ENST00000606782 CRABP1P29762 137 aa11.43□□□□□ -0.58
CTSA-213ENST00000606782 GGT2P36268 569 aa11.43□□□□□ -0.58
CTSA-213ENST00000606782 ZNF84P51523 738 aa11.43□□□□□ -0.58
CTSA-213ENST00000606782 SLC25A1P53007 311 aa11.43□□□□□ -0.58
CTSA-213ENST00000606782 LCN6P62502 163 aa11.43□□□□□ -0.58
CTSA-213ENST00000606782 ADARB1P78563 741 aaKnown RBP11.43□□□□□ -0.58
CTSA-213ENST00000606782 MRPS34P82930 218 aaKnown RBP11.43□□□□□ -0.58
CTSA-213ENST00000606782 FMODQ06828 376 aa11.43□□□□□ -0.58
CTSA-213ENST00000606782 CD47Q08722 323 aa11.43□□□□□ -0.58
CTSA-213ENST00000606782 CRMP1Q14194 572 aa11.43□□□□□ -0.58
CTSA-213ENST00000606782 SNAPC1Q16533 368 aa11.43□□□□□ -0.58
CTSA-213ENST00000606782 TMEM53Q6P2H8 277 aa11.43□□□□□ -0.58
CTSA-213ENST00000606782 FOXL2NBQ6ZUU3 175 aa11.43□□□□□ -0.58
CTSA-213ENST00000606782 SLC16A14Q7RTX9 510 aa11.43□□□□□ -0.58
CTSA-213ENST00000606782 PHC2Q8IXK0 858 aa11.43□□□□□ -0.58
CTSA-213ENST00000606782 PAQR4Q8N4S7 273 aaPredicted RBP11.43□□□□□ -0.58
CTSA-213ENST00000606782 SLC30A7Q8NEW0 376 aa11.43□□□□□ -0.58
CTSA-213ENST00000606782 SDR9C7Q8NEX9 313 aa11.43□□□□□ -0.58
CTSA-213ENST00000606782 TRUB1Q8WWH5 349 aaKnown RBP11.43□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 118.8 ms