RNA–Protein interactions for RNA: ENST00000585448.1

SMAD4-203, Transcript of SMAD family member 4, humanhuman

TSL 5

Gene SMAD4, Length 459 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-203ENST00000585448 HIST2H2BFQ5QNW6 126 aaPredicted RBP5.48□□□□□ -1.53
SMAD4-203ENST00000585448 SLC25A30Q5SVS4 291 aa5.48□□□□□ -1.53
SMAD4-203ENST00000585448 KHDRBS2Q5VWX1 349 aaKnown RBP5.48□□□□□ -1.53
SMAD4-203ENST00000585448 AWAT2Q6E213 333 aa5.48□□□□□ -1.53
SMAD4-203ENST00000585448 OR2T2Q6IF00 324 aa5.48□□□□□ -1.53
SMAD4-203ENST00000585448 FAM71E1Q6IPT2 247 aa5.48□□□□□ -1.53
SMAD4-203ENST00000585448 MRNIPQ6NTE8 343 aa5.48□□□□□ -1.53
SMAD4-203ENST00000585448 RPUSD3Q6P087 351 aaKnown RBP5.48□□□□□ -1.53
SMAD4-203ENST00000585448 PGBD2Q6P3X8 592 aa5.48□□□□□ -1.53
SMAD4-203ENST00000585448 SLC27A1Q6PCB7 646 aa5.48□□□□□ -1.53
SMAD4-203ENST00000585448 IL27RAQ6UWB1 636 aa5.48□□□□□ -1.53
SMAD4-203ENST00000585448 TMEM108Q6UXF1 575 aa5.48□□□□□ -1.53
SMAD4-203ENST00000585448 C15orf39Q6ZRI6 1047 aa5.48□□□□□ -1.53
SMAD4-203ENST00000585448 ABHD12BQ7Z5M8 362 aaPredicted RBP5.48□□□□□ -1.53
SMAD4-203ENST00000585448 BIVMQ86UB2 503 aa5.48□□□□□ -1.53
SMAD4-203ENST00000585448 MARCH9Q86YJ5 346 aa5.48□□□□□ -1.53
SMAD4-203ENST00000585448 C9orf40Q8IXQ3 194 aa5.48□□□□□ -1.53
SMAD4-203ENST00000585448 EXD3Q8N9H8 876 aa5.48□□□□□ -1.53
SMAD4-203ENST00000585448 NEIL3Q8TAT5 605 aa5.48□□□□□ -1.53
SMAD4-203ENST00000585448 ZNF596Q8TC21 504 aa5.48□□□□□ -1.53
SMAD4-203ENST00000585448 HAVCR2Q8TDQ0 301 aa5.48□□□□□ -1.53
SMAD4-203ENST00000585448 ABHD3Q8WU67 409 aa5.48□□□□□ -1.53
SMAD4-203ENST00000585448 EEF1AKMT1Q8WVE0 214 aa5.48□□□□□ -1.53
SMAD4-203ENST00000585448 SMIM4Q8WVI0 70 aa5.48□□□□□ -1.53
SMAD4-203ENST00000585448 SORCS1Q8WY21 1168 aa5.48□□□□□ -1.53
SMAD4-203ENST00000585448 C11orf40Q8WZ69 217 aa5.48□□□□□ -1.53
SMAD4-203ENST00000585448 RGP1Q92546 391 aaPredicted RBP5.48□□□□□ -1.53
SMAD4-203ENST00000585448 HIST1H2BHQ93079 126 aa5.48□□□□□ -1.53
SMAD4-203ENST00000585448 PSMG2Q969U7 264 aa5.48□□□□□ -1.53
SMAD4-203ENST00000585448 SLC25A28Q96A46 364 aa5.48□□□□□ -1.53
SMAD4-203ENST00000585448 TMEM159Q96B96 161 aa5.48□□□□□ -1.53
SMAD4-203ENST00000585448 RPUSD4Q96CM3 377 aaKnown RBP5.48□□□□□ -1.53
SMAD4-203ENST00000585448 RAB39BQ96DA2 213 aa5.48□□□□□ -1.53
SMAD4-203ENST00000585448 PGAM5Q96HS1 289 aa5.48□□□□□ -1.53
SMAD4-203ENST00000585448 SLC35E1Q96K37 410 aa5.48□□□□□ -1.53
SMAD4-203ENST00000585448 ABHD1Q96SE0 405 aa5.48□□□□□ -1.53
SMAD4-203ENST00000585448 HIST1H2BNQ99877 126 aa5.48□□□□□ -1.53
SMAD4-203ENST00000585448 HIST1H2BMQ99879 126 aa5.48□□□□□ -1.53
SMAD4-203ENST00000585448 TMEM47Q9BQJ4 181 aa5.48□□□□□ -1.53
SMAD4-203ENST00000585448 ANGPTL4Q9BY76 406 aa5.48□□□□□ -1.53
SMAD4-203ENST00000585448 ATG5Q9H1Y0 275 aa5.48□□□□□ -1.53
SMAD4-203ENST00000585448 OR10A4Q9H209 315 aa5.48□□□□□ -1.53
SMAD4-203ENST00000585448 DPEP2Q9H4A9 486 aa5.48□□□□□ -1.53
SMAD4-203ENST00000585448 HRASLSQ9HDD0 168 aa5.48□□□□□ -1.53
SMAD4-203ENST00000585448 FGF20Q9NP95 211 aaPredicted RBP5.48□□□□□ -1.53
SMAD4-203ENST00000585448 THSD1Q9NS62 852 aa5.48□□□□□ -1.53
SMAD4-203ENST00000585448 CBLN4Q9NTU7 201 aa5.48□□□□□ -1.53
SMAD4-203ENST00000585448 LYRM2Q9NU23 88 aaPredicted RBP5.48□□□□□ -1.53
SMAD4-203ENST00000585448 ZCCHC3Q9NUD5 404 aaKnown RBP5.48□□□□□ -1.53
SMAD4-203ENST00000585448 MRPS18AQ9NVS2 196 aaKnown RBP5.48□□□□□ -1.53
SMAD4-203ENST00000585448 UPB1Q9UBR1 384 aa5.48□□□□□ -1.53
SMAD4-203ENST00000585448 LPAR3Q9UBY5 353 aa5.48□□□□□ -1.53
SMAD4-203ENST00000585448 UTS2RQ9UKP6 389 aa5.48□□□□□ -1.53
SMAD4-203ENST00000585448 TGIF2-C20orf24A0A0A6YYL0 155 aa5.47□□□□□ -1.53
SMAD4-203ENST00000585448 FAM183AA6NL82 134 aa5.47□□□□□ -1.53
SMAD4-203ENST00000585448 GABRR3A8MPY1 467 aa5.47□□□□□ -1.53
SMAD4-203ENST00000585448 RNF212BA8MTL3 300 aa5.47□□□□□ -1.53
SMAD4-203ENST00000585448 MAGEB17A8MXT2 336 aa5.47□□□□□ -1.53
SMAD4-203ENST00000585448 E7EQ34 232 aa5.47□□□□□ -1.53
SMAD4-203ENST00000585448 HAS3O00219 553 aa5.47□□□□□ -1.53
SMAD4-203ENST00000585448 GOSR2O14653 212 aa5.47□□□□□ -1.53
SMAD4-203ENST00000585448 RAMP3O60896 148 aa5.47□□□□□ -1.53
SMAD4-203ENST00000585448 NDUFS3O75489 264 aa5.47□□□□□ -1.53
SMAD4-203ENST00000585448 WNT1P04628 370 aa5.47□□□□□ -1.53
SMAD4-203ENST00000585448 ICAM1P05362 532 aa5.47□□□□□ -1.53
SMAD4-203ENST00000585448 EIF4EP06730 217 aaKnown RBP5.47□□□□□ -1.53
SMAD4-203ENST00000585448 LIPFP07098 398 aa5.47□□□□□ -1.53
SMAD4-203ENST00000585448 LINC00032P0C843 101 aa5.47□□□□□ -1.53
SMAD4-203ENST00000585448 SNHG28P0DPA3 235 aa5.47□□□□□ -1.53
SMAD4-203ENST00000585448 ARSAP15289 507 aa5.47□□□□□ -1.53
SMAD4-203ENST00000585448 FOLR1P15328 257 aa5.47□□□□□ -1.53
SMAD4-203ENST00000585448 MAOAP21397 527 aa5.47□□□□□ -1.53
SMAD4-203ENST00000585448 ZNF10P21506 573 aaPredicted RBP5.47□□□□□ -1.53
SMAD4-203ENST00000585448 GPD1P21695 349 aa5.47□□□□□ -1.53
SMAD4-203ENST00000585448 DRD5P21918 477 aa5.47□□□□□ -1.53
SMAD4-203ENST00000585448 PPIFP30405 207 aaKnown RBP5.47□□□□□ -1.53
SMAD4-203ENST00000585448 TLX1P31314 330 aaPredicted RBP5.47□□□□□ -1.53
SMAD4-203ENST00000585448 PSMB10P40306 273 aa5.47□□□□□ -1.53
SMAD4-203ENST00000585448 RPL29P47914 159 aaKnown RBP5.47□□□□□ -1.53
SMAD4-203ENST00000585448 HMGA2P52926 109 aa5.47□□□□□ -1.53
SMAD4-203ENST00000585448 OAZ1P54368 228 aa5.47□□□□□ -1.53
SMAD4-203ENST00000585448 DIO3P55073 304 aa5.47□□□□□ -1.53
SMAD4-203ENST00000585448 CSNK1G2P78368 415 aa5.47□□□□□ -1.53
SMAD4-203ENST00000585448 CDK5Q00535 292 aa5.47□□□□□ -1.53
SMAD4-203ENST00000585448 IRF8Q02556 426 aa5.47□□□□□ -1.53
SMAD4-203ENST00000585448 RBPJQ06330 500 aa5.47□□□□□ -1.53
SMAD4-203ENST00000585448 ZNF234Q14588 700 aa5.47□□□□□ -1.53
SMAD4-203ENST00000585448 MELKQ14680 651 aa5.47□□□□□ -1.53
SMAD4-203ENST00000585448 MEF2DQ14814 521 aa5.47□□□□□ -1.53
SMAD4-203ENST00000585448 MAPK14Q16539 360 aa5.47□□□□□ -1.53
SMAD4-203ENST00000585448 PIP5KL1Q5T9C9 394 aa5.47□□□□□ -1.53
SMAD4-203ENST00000585448 MARC1Q5VT66 337 aa5.47□□□□□ -1.53
SMAD4-203ENST00000585448 TMEM268Q5VZI3 342 aa5.47□□□□□ -1.53
SMAD4-203ENST00000585448 C11orf87Q6NUJ2 197 aa5.47□□□□□ -1.53
SMAD4-203ENST00000585448 DNM1P34Q6PK57 102 aa5.47□□□□□ -1.53
SMAD4-203ENST00000585448 ZNF705AQ6ZN79 300 aaPredicted RBP5.47□□□□□ -1.53
SMAD4-203ENST00000585448 LAS2Q8IYD9 372 aa5.47□□□□□ -1.53
SMAD4-203ENST00000585448 ZNF100Q8IYN0 542 aa5.47□□□□□ -1.53
SMAD4-203ENST00000585448 LYG1Q8N1E2 194 aa5.47□□□□□ -1.53
SMAD4-203ENST00000585448 HORMAD2Q8N7B1 307 aa5.47□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 162.2 ms