RNA–Protein interactions for RNA: ENST00000562956.1

LINC00838-201, long intergenic non-protein coding RNA 838, humanhuman

TSL 1 (best) BASIC

Gene LINC00838, Length 2,936 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00838-201ENST00000562956 RFX2P48378 723 aa8.35□□□□□ -1.07
LINC00838-201ENST00000562956 CLDN15P56746 228 aa8.35□□□□□ -1.07
LINC00838-201ENST00000562956 SRSF6Q13247 344 aaKnown RBP8.35□□□□□ -1.07
LINC00838-201ENST00000562956 PHYHD1Q5SRE7 291 aa8.35□□□□□ -1.07
LINC00838-201ENST00000562956 CATSPERDQ86XM0 798 aa8.35□□□□□ -1.07
LINC00838-201ENST00000562956 SULF2Q8IWU5 870 aa8.35□□□□□ -1.07
LINC00838-201ENST00000562956 ZNF433Q8N7K0 673 aaPredicted RBP8.35□□□□□ -1.07
LINC00838-201ENST00000562956 ZIC4Q8N9L1 334 aa8.35□□□□□ -1.07
LINC00838-201ENST00000562956 OR10H5Q8NGA6 315 aa8.35□□□□□ -1.07
LINC00838-201ENST00000562956 OR10S1Q8NGN2 331 aa8.35□□□□□ -1.07
LINC00838-201ENST00000562956 GRPEL2Q8TAA5 225 aa8.35□□□□□ -1.07
LINC00838-201ENST00000562956 GPR148Q8TDV2 347 aa8.35□□□□□ -1.07
LINC00838-201ENST00000562956 RNF133Q8WVZ7 376 aa8.35□□□□□ -1.07
LINC00838-201ENST00000562956 TMEM106AQ96A25 262 aa8.35□□□□□ -1.07
LINC00838-201ENST00000562956 FER1L6-AS2Q96M78 137 aa8.35□□□□□ -1.07
LINC00838-201ENST00000562956 OR2M2Q96R28 347 aa8.35□□□□□ -1.07
LINC00838-201ENST00000562956 FAM173AQ9BQD7 235 aa8.35□□□□□ -1.07
LINC00838-201ENST00000562956 BRD7Q9NPI1 651 aa8.35□□□□□ -1.07
LINC00838-201ENST00000562956 ASCL3Q9NQ33 180 aa8.35□□□□□ -1.07
LINC00838-201ENST00000562956 CYSLTR2Q9NS75 346 aa8.35□□□□□ -1.07
LINC00838-201ENST00000562956 CENPMQ9NSP4 180 aa8.35□□□□□ -1.07
LINC00838-201ENST00000562956 ABI3Q9P2A4 366 aa8.35□□□□□ -1.07
LINC00838-201ENST00000562956 EXTL2Q9UBQ6 330 aa8.35□□□□□ -1.07
LINC00838-201ENST00000562956 KCNN3Q9UGI6 736 aa8.35□□□□□ -1.07
LINC00838-201ENST00000562956 BOKQ9UMX3 212 aaPredicted RBP8.35□□□□□ -1.07
LINC00838-201ENST00000562956 EMC9Q9Y3B6 208 aa8.35□□□□□ -1.07
LINC00838-201ENST00000562956 LHFPL6Q9Y693 200 aa8.35□□□□□ -1.07
LINC00838-201ENST00000562956 TRAV8-7A0A075B6U6 113 aa8.34□□□□□ -1.07
LINC00838-201ENST00000562956 TRBV5-7A0A0A0MS05 114 aa8.34□□□□□ -1.07
LINC00838-201ENST00000562956 DOK2O60496 412 aa8.34□□□□□ -1.07
LINC00838-201ENST00000562956 VAMP5O95183 116 aa8.34□□□□□ -1.07
LINC00838-201ENST00000562956 CELA3AP09093 270 aa8.34□□□□□ -1.07
LINC00838-201ENST00000562956 ADRA2CP18825 462 aa8.34□□□□□ -1.07
LINC00838-201ENST00000562956 GFRA1P56159 465 aa8.34□□□□□ -1.07
LINC00838-201ENST00000562956 CARD18P57730 90 aa8.34□□□□□ -1.07
LINC00838-201ENST00000562956 RAC3P60763 192 aa8.34□□□□□ -1.07
LINC00838-201ENST00000562956 POU4F3Q15319 338 aa8.34□□□□□ -1.07
LINC00838-201ENST00000562956 METAP1DQ6UB28 335 aaPredicted RBP8.34□□□□□ -1.07
LINC00838-201ENST00000562956 STAC2Q6ZMT1 411 aa8.34□□□□□ -1.07
LINC00838-201ENST00000562956 CFAP77Q6ZQR2 320 aa8.34□□□□□ -1.07
LINC00838-201ENST00000562956 VASH2Q86V25 355 aa8.34□□□□□ -1.07
LINC00838-201ENST00000562956 LRRC28Q86X40 367 aaPredicted RBP8.34□□□□□ -1.07
LINC00838-201ENST00000562956 OR4M2Q8NGB6 313 aa8.34□□□□□ -1.07
LINC00838-201ENST00000562956 OR4M1Q8NGD0 313 aa8.34□□□□□ -1.07
LINC00838-201ENST00000562956 ZNF775Q96BV0 537 aaPredicted RBP8.34□□□□□ -1.07
LINC00838-201ENST00000562956 TCF7L1Q9HCS4 588 aa8.34□□□□□ -1.07
LINC00838-201ENST00000562956 GLTPQ9NZD2 209 aa8.34□□□□□ -1.07
LINC00838-201ENST00000562956 ADAM30Q9UKF2 790 aa8.34□□□□□ -1.07
LINC00838-201ENST00000562956 CLEC4AQ9UMR7 237 aa8.34□□□□□ -1.07
LINC00838-201ENST00000562956 MRPS18CQ9Y3D5 142 aaKnown RBP8.34□□□□□ -1.07
LINC00838-201ENST00000562956 R4GMQ9 66 aa8.34□□□□□ -1.07
LINC00838-201ENST00000562956 NOS1APO75052 506 aaPredicted RBP8.34□□□□□ -1.07
LINC00838-201ENST00000562956 ZNF432O94892 652 aa8.34□□□□□ -1.07
LINC00838-201ENST00000562956 NPR2P20594 1047 aa8.34□□□□□ -1.07
LINC00838-201ENST00000562956 CD82P27701 267 aa8.34□□□□□ -1.07
LINC00838-201ENST00000562956 DDOSTP39656 456 aa8.34□□□□□ -1.07
LINC00838-201ENST00000562956 SELENOPP49908 381 aa8.34□□□□□ -1.07
LINC00838-201ENST00000562956 RAB25P57735 213 aa8.34□□□□□ -1.07
LINC00838-201ENST00000562956 HES5Q5TA89 166 aa8.34□□□□□ -1.07
LINC00838-201ENST00000562956 TMEM123Q8N131 208 aa8.34□□□□□ -1.07
LINC00838-201ENST00000562956 Q8N402 240 aa8.34□□□□□ -1.07
LINC00838-201ENST00000562956 GALNT16Q8N428 558 aa8.34□□□□□ -1.07
LINC00838-201ENST00000562956 DEDD2Q8WXF8 326 aa8.34□□□□□ -1.07
LINC00838-201ENST00000562956 SLAMF6Q96DU3 332 aa8.34□□□□□ -1.07
LINC00838-201ENST00000562956 RNF170Q96K19 258 aa8.34□□□□□ -1.07
LINC00838-201ENST00000562956 ADGRG7Q96K78 797 aa8.34□□□□□ -1.07
LINC00838-201ENST00000562956 SLA2Q9H6Q3 261 aa8.34□□□□□ -1.07
LINC00838-201ENST00000562956 ZNF703Q9H7S9 590 aaPredicted RBP8.34□□□□□ -1.07
LINC00838-201ENST00000562956 G6PC2Q9NQR9 355 aa8.34□□□□□ -1.07
LINC00838-201ENST00000562956 HSPB11Q9Y547 144 aa8.34□□□□□ -1.07
LINC00838-201ENST00000562956 ARGFXA6NJG6 315 aa8.33□□□□□ -1.08
LINC00838-201ENST00000562956 IFITM5A6NNB3 132 aa8.33□□□□□ -1.08
LINC00838-201ENST00000562956 PDCD5O14737 125 aa8.33□□□□□ -1.08
LINC00838-201ENST00000562956 TSPAN4O14817 238 aa8.33□□□□□ -1.08
LINC00838-201ENST00000562956 TLX3O43711 291 aaPredicted RBP8.33□□□□□ -1.08
LINC00838-201ENST00000562956 CXCL13O43927 109 aa8.33□□□□□ -1.08
LINC00838-201ENST00000562956 ZNF780AO75290 641 aaPredicted RBP8.33□□□□□ -1.08
LINC00838-201ENST00000562956 H2BFMP0C1H6 154 aa8.33□□□□□ -1.08
LINC00838-201ENST00000562956 POU3F2P20265 443 aaPredicted RBP8.33□□□□□ -1.08
LINC00838-201ENST00000562956 NBL1P41271 181 aa8.33□□□□□ -1.08
LINC00838-201ENST00000562956 ESPNLQ6ZVH7 1005 aa8.33□□□□□ -1.08
LINC00838-201ENST00000562956 LRRTM1Q86UE6 522 aa8.33□□□□□ -1.08
LINC00838-201ENST00000562956 DNAAF1Q8NEP3 725 aa8.33□□□□□ -1.08
LINC00838-201ENST00000562956 OR10D3Q8NH80 312 aa8.33□□□□□ -1.08
LINC00838-201ENST00000562956 TSEN15Q8WW01 171 aaKnown RBP8.33□□□□□ -1.08
LINC00838-201ENST00000562956 ROBO4Q8WZ75 1007 aa8.33□□□□□ -1.08
LINC00838-201ENST00000562956 SLC7A6Q92536 515 aa8.33□□□□□ -1.08
LINC00838-201ENST00000562956 GDF2Q9UK05 429 aaPredicted RBP8.33□□□□□ -1.08
LINC00838-201ENST00000562956 FREM3P0C091 2139 aa8.33□□□□□ -1.08
LINC00838-201ENST00000562956 TMEM269A0A1B0GVZ9 245 aa8.33□□□□□ -1.08
LINC00838-201ENST00000562956 FAM166BA8MTA8 275 aa8.33□□□□□ -1.08
LINC00838-201ENST00000562956 AIPO00170 330 aa8.33□□□□□ -1.08
LINC00838-201ENST00000562956 MAS1P04201 325 aa8.33□□□□□ -1.08
LINC00838-201ENST00000562956 NTF4P34130 210 aa8.33□□□□□ -1.08
LINC00838-201ENST00000562956 CSNK1A1P48729 337 aa8.33□□□□□ -1.08
LINC00838-201ENST00000562956 SCN1BQ07699 218 aa8.33□□□□□ -1.08
LINC00838-201ENST00000562956 RIN1Q13671 783 aa8.33□□□□□ -1.08
LINC00838-201ENST00000562956 DEGS2Q6QHC5 323 aa8.33□□□□□ -1.08
LINC00838-201ENST00000562956 HIST2H2ABQ8IUE6 130 aaPredicted RBP8.33□□□□□ -1.08
LINC00838-201ENST00000562956 OR6N1Q8NGY5 312 aa8.33□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 677 ms