RNA–Protein interactions for RNA: ENST00000543140.5

COL4A1-204, Transcript of collagen type IV alpha 1 chain, humanhuman

TSL 1 (best) BASIC

Gene COL4A1, Length 2,547 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A1-204ENST00000543140 TIPARPQ7Z3E1 657 aaKnown RBP14.51□□□□□ -0.09
COL4A1-204ENST00000543140 PAQR8Q8TEZ7 354 aa14.51□□□□□ -0.09
COL4A1-204ENST00000543140 GIMAP1Q8WWP7 306 aa14.51□□□□□ -0.09
COL4A1-204ENST00000543140 SLC39A7Q92504 469 aa14.51□□□□□ -0.09
COL4A1-204ENST00000543140 TMEM246Q9BRR3 403 aa14.51□□□□□ -0.09
COL4A1-204ENST00000543140 C1orf198Q9H425 327 aa14.51□□□□□ -0.09
COL4A1-204ENST00000543140 GDF2Q9UK05 429 aaPredicted RBP14.51□□□□□ -0.09
COL4A1-204ENST00000543140 DKKL1Q9UK85 242 aa14.51□□□□□ -0.09
COL4A1-204ENST00000543140 NCOA6Q14686 2063 aaPredicted RBP14.51□□□□□ -0.09
COL4A1-204ENST00000543140 COL27A1Q8IZC6 1860 aaPredicted RBP14.5□□□□□ -0.09
COL4A1-204ENST00000543140 TRAV18A0A075B6X5 111 aa14.5□□□□□ -0.09
COL4A1-204ENST00000543140 OR2M5A3KFT3 312 aa14.5□□□□□ -0.09
COL4A1-204ENST00000543140 MEIS3P1A6NDR6 274 aa14.5□□□□□ -0.09
COL4A1-204ENST00000543140 B4E171 279 aa14.5□□□□□ -0.09
COL4A1-204ENST00000543140 M0R296 226 aa14.5□□□□□ -0.09
COL4A1-204ENST00000543140 ACOT7O00154 380 aa14.5□□□□□ -0.09
COL4A1-204ENST00000543140 ECDO95905 644 aaPredicted RBP14.5□□□□□ -0.09
COL4A1-204ENST00000543140 IGFBP3P17936 291 aaPredicted RBP14.5□□□□□ -0.09
COL4A1-204ENST00000543140 TSPAN7P41732 249 aa14.5□□□□□ -0.09
COL4A1-204ENST00000543140 Q0VFX4 171 aa14.5□□□□□ -0.09
COL4A1-204ENST00000543140 ANKRD16Q6P6B7 361 aa14.5□□□□□ -0.09
COL4A1-204ENST00000543140 DEGS2Q6QHC5 323 aa14.5□□□□□ -0.09
COL4A1-204ENST00000543140 KLHL24Q6TFL4 600 aa14.5□□□□□ -0.09
COL4A1-204ENST00000543140 ZNF704Q6ZNC4 412 aaPredicted RBP14.5□□□□□ -0.09
COL4A1-204ENST00000543140 PPP1R32Q7Z5V6 425 aa14.5□□□□□ -0.09
COL4A1-204ENST00000543140 JAGN1Q8N5M9 183 aa14.5□□□□□ -0.09
COL4A1-204ENST00000543140 OR6X1Q8NH79 312 aa14.5□□□□□ -0.09
COL4A1-204ENST00000543140 MS4A3Q96HJ5 214 aa14.5□□□□□ -0.09
COL4A1-204ENST00000543140 C20orf85Q9H1P6 137 aa14.5□□□□□ -0.09
COL4A1-204ENST00000543140 ATG5Q9H1Y0 275 aa14.5□□□□□ -0.09
COL4A1-204ENST00000543140 OR51J1Q9H342 316 aa14.5□□□□□ -0.09
COL4A1-204ENST00000543140 FAM206AQ9NX38 181 aa14.5□□□□□ -0.09
COL4A1-204ENST00000543140 ASH2LQ9UBL3 628 aa14.5□□□□□ -0.09
COL4A1-204ENST00000543140 TCFL5Q9UL49 500 aa14.5□□□□□ -0.09
COL4A1-204ENST00000543140 MRPS18BQ9Y676 258 aaKnown RBP14.5□□□□□ -0.09
COL4A1-204ENST00000543140 A0A0G2JMM0 328 aa14.5□□□□□ -0.09
COL4A1-204ENST00000543140 LOC100289279A0A1B0GTE1 492 aa14.5□□□□□ -0.09
COL4A1-204ENST00000543140 TMEM272A0A1B0GTI8 110 aa14.5□□□□□ -0.09
COL4A1-204ENST00000543140 A0A1W2PPB8 328 aa14.5□□□□□ -0.09
COL4A1-204ENST00000543140 A0A1W2PRS3 328 aa14.5□□□□□ -0.09
COL4A1-204ENST00000543140 C7orf66A4D0T2 115 aa14.5□□□□□ -0.09
COL4A1-204ENST00000543140 GGT3PA6NGU5 568 aa14.5□□□□□ -0.09
COL4A1-204ENST00000543140 KIR3DP1A8MWS1 328 aa14.5□□□□□ -0.09
COL4A1-204ENST00000543140 ISG15P05161 165 aa14.5□□□□□ -0.09
COL4A1-204ENST00000543140 ACSM4P0C7M7 580 aa14.5□□□□□ -0.09
COL4A1-204ENST00000543140 SP9P0CG40 484 aa14.5□□□□□ -0.09
COL4A1-204ENST00000543140 ACHEP22303 614 aa14.5□□□□□ -0.09
COL4A1-204ENST00000543140 MMP16P51512 607 aa14.5□□□□□ -0.09
COL4A1-204ENST00000543140 GUCA2AQ02747 115 aa14.5□□□□□ -0.09
COL4A1-204ENST00000543140 MAB21L1Q13394 359 aa14.5□□□□□ -0.09
COL4A1-204ENST00000543140 GSG1Q2KHT4 349 aa14.5□□□□□ -0.09
COL4A1-204ENST00000543140 Q5BKY6 102 aa14.5□□□□□ -0.09
COL4A1-204ENST00000543140 GLT8D1Q68CQ7 371 aa14.5□□□□□ -0.09
COL4A1-204ENST00000543140 LUZP2Q86TE4 346 aa14.5□□□□□ -0.09
COL4A1-204ENST00000543140 OR11H7Q8NGC8 314 aa14.5□□□□□ -0.09
COL4A1-204ENST00000543140 OR2AJ1Q8NGZ0 328 aa14.5□□□□□ -0.09
COL4A1-204ENST00000543140 FGGYQ96C11 551 aa14.5□□□□□ -0.09
COL4A1-204ENST00000543140 UCN2Q96RP3 112 aa14.5□□□□□ -0.09
COL4A1-204ENST00000543140 OR10A4Q9H209 315 aa14.5□□□□□ -0.09
COL4A1-204ENST00000543140 ZNF222Q9UK12 451 aa14.5□□□□□ -0.09
COL4A1-204ENST00000543140 DOCK10Q96BY6 2186 aa14.49□□□□□ -0.09
COL4A1-204ENST00000543140 ANKRD20A5PA0PJZ0 165 aa14.49□□□□□ -0.09
COL4A1-204ENST00000543140 TTRP02766 147 aa14.49□□□□□ -0.09
COL4A1-204ENST00000543140 SLC2A1P11166 492 aa14.49□□□□□ -0.09
COL4A1-204ENST00000543140 STOMP27105 288 aa14.49□□□□□ -0.09
COL4A1-204ENST00000543140 HTR2CP28335 458 aa14.49□□□□□ -0.09
COL4A1-204ENST00000543140 PRKXP51817 358 aa14.49□□□□□ -0.09
COL4A1-204ENST00000543140 AP3S2P59780 193 aa14.49□□□□□ -0.09
COL4A1-204ENST00000543140 FAPQ12884 760 aa14.49□□□□□ -0.09
COL4A1-204ENST00000543140 TIGD3Q6B0B8 471 aa14.49□□□□□ -0.09
COL4A1-204ENST00000543140 RAB11FIP2Q7L804 512 aa14.49□□□□□ -0.09
COL4A1-204ENST00000543140 CT55Q8WUE5 264 aa14.49□□□□□ -0.09
COL4A1-204ENST00000543140 SLC25A28Q96A46 364 aa14.49□□□□□ -0.09
COL4A1-204ENST00000543140 SH2D2AQ9NP31 389 aa14.49□□□□□ -0.09
COL4A1-204ENST00000543140 NCKAP5O14513 1909 aa14.49□□□□□ -0.09
COL4A1-204ENST00000543140 A0A087WZY1 265 aa14.49□□□□□ -0.09
COL4A1-204ENST00000543140 RER1O15258 196 aa14.49□□□□□ -0.09
COL4A1-204ENST00000543140 F10P00742 488 aa14.49□□□□□ -0.09
COL4A1-204ENST00000543140 CXCL3P19876 107 aa14.49□□□□□ -0.09
COL4A1-204ENST00000543140 DSCR4P56555 118 aaPredicted RBP14.49□□□□□ -0.09
COL4A1-204ENST00000543140 ST3GAL2Q16842 350 aa14.49□□□□□ -0.09
COL4A1-204ENST00000543140 TMEM244Q5VVB8 128 aa14.49□□□□□ -0.09
COL4A1-204ENST00000543140 OR10K2Q6IF99 312 aa14.49□□□□□ -0.09
COL4A1-204ENST00000543140 FAM166AQ6J272 317 aa14.49□□□□□ -0.09
COL4A1-204ENST00000543140 SLC25A47Q6Q0C1 308 aa14.49□□□□□ -0.09
COL4A1-204ENST00000543140 C6orf15Q6UXA7 325 aaPredicted RBP14.49□□□□□ -0.09
COL4A1-204ENST00000543140 ZBTB44Q8NCP5 570 aa14.49□□□□□ -0.09
COL4A1-204ENST00000543140 PBOV1Q9GZY1 135 aa14.49□□□□□ -0.09
COL4A1-204ENST00000543140 DIABLOQ9NR28 239 aa14.49□□□□□ -0.09
COL4A1-204ENST00000543140 FAM172BPA6NC97 362 aa14.48□□□□□ -0.09
COL4A1-204ENST00000543140 ALDOBP05062 364 aa14.48□□□□□ -0.09
COL4A1-204ENST00000543140 UBCP0CG48 685 aaKnown RBP14.48□□□□□ -0.09
COL4A1-204ENST00000543140 PSMB1P20618 241 aaKnown RBP14.48□□□□□ -0.09
COL4A1-204ENST00000543140 GNALP38405 381 aa14.48□□□□□ -0.09
COL4A1-204ENST00000543140 VEGFCP49767 419 aa14.48□□□□□ -0.09
COL4A1-204ENST00000543140 SCAND1P57086 179 aa14.48□□□□□ -0.09
COL4A1-204ENST00000543140 MRPS10P82664 201 aaKnown RBP14.48□□□□□ -0.09
COL4A1-204ENST00000543140 TAF13Q15543 124 aa14.48□□□□□ -0.09
COL4A1-204ENST00000543140 OR56B4Q8NH76 319 aa14.48□□□□□ -0.09
COL4A1-204ENST00000543140 C1QBP02746 253 aa14.48□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms