RNA–Protein interactions for RNA: ENST00000539661.5

RAB40C-205, Transcript of RAB40C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 3 BASIC

Gene RAB40C, Length 2,609 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-205ENST00000539661 ZNF260Q3ZCT1 412 aa15.82■□□□□ 0.12
RAB40C-205ENST00000539661 ZFP82Q8N141 532 aa15.82■□□□□ 0.12
RAB40C-205ENST00000539661 NANPQ8TBE9 248 aa15.82■□□□□ 0.12
RAB40C-205ENST00000539661 NUDCD2Q8WVJ2 157 aa15.82■□□□□ 0.12
RAB40C-205ENST00000539661 FAM3CQ92520 227 aa15.82■□□□□ 0.12
RAB40C-205ENST00000539661 TCEAL3Q969E4 200 aa15.82■□□□□ 0.12
RAB40C-205ENST00000539661 SPACA7Q96KW9 195 aa15.82■□□□□ 0.12
RAB40C-205ENST00000539661 RNF126Q9BV68 326 aa15.82■□□□□ 0.12
RAB40C-205ENST00000539661 RHOFQ9HBH0 211 aa15.82■□□□□ 0.12
RAB40C-205ENST00000539661 GDE1Q9NZC3 331 aa15.82■□□□□ 0.12
RAB40C-205ENST00000539661 HEATR5AQ86XA9 2040 aa15.82■□□□□ 0.12
RAB40C-205ENST00000539661 LINC00587B1AMM8 73 aa15.81■□□□□ 0.12
RAB40C-205ENST00000539661 SGCEO43556 437 aa15.81■□□□□ 0.12
RAB40C-205ENST00000539661 PNPP00491 289 aa15.81■□□□□ 0.12
RAB40C-205ENST00000539661 ERCC1P07992 297 aaPredicted RBP15.81■□□□□ 0.12
RAB40C-205ENST00000539661 LYL1P12980 280 aa15.81■□□□□ 0.12
RAB40C-205ENST00000539661 PTAFRP25105 342 aa15.81■□□□□ 0.12
RAB40C-205ENST00000539661 MOGAT2Q3SYC2 334 aa15.81■□□□□ 0.12
RAB40C-205ENST00000539661 KCTD18Q6PI47 426 aaPredicted RBP15.81■□□□□ 0.12
RAB40C-205ENST00000539661 KCTD9Q7L273 389 aa15.81■□□□□ 0.12
RAB40C-205ENST00000539661 FJX1Q86VR8 437 aa15.81■□□□□ 0.12
RAB40C-205ENST00000539661 CATSPERDQ86XM0 798 aa15.81■□□□□ 0.12
RAB40C-205ENST00000539661 BCORP1Q8N888 145 aa15.81■□□□□ 0.12
RAB40C-205ENST00000539661 ZSCAN1Q8NBB4 408 aa15.81■□□□□ 0.12
RAB40C-205ENST00000539661 SLC25A44Q96H78 314 aaPredicted RBP15.81■□□□□ 0.12
RAB40C-205ENST00000539661 SMIM8Q96KF7 97 aa15.81■□□□□ 0.12
RAB40C-205ENST00000539661 KXD1Q9BQD3 176 aa15.81■□□□□ 0.12
RAB40C-205ENST00000539661 TCEAL7Q9BRU2 100 aa15.81■□□□□ 0.12
RAB40C-205ENST00000539661 DTX4Q9Y2E6 619 aa15.81■□□□□ 0.12
RAB40C-205ENST00000539661 WIF1Q9Y5W5 379 aa15.81■□□□□ 0.12
RAB40C-205ENST00000539661 GON4LQ3T8J9 2241 aa15.81■□□□□ 0.12
RAB40C-205ENST00000539661 DMDP11532 3685 aa15.81■□□□□ 0.12
RAB40C-205ENST00000539661 A0A0B4J2A0 478 aa15.81■□□□□ 0.12
RAB40C-205ENST00000539661 A0A1W2PQU0 124 aa15.81■□□□□ 0.12
RAB40C-205ENST00000539661 UBE2CO00762 179 aa15.81■□□□□ 0.12
RAB40C-205ENST00000539661 GLAP06280 429 aa15.81■□□□□ 0.12
RAB40C-205ENST00000539661 CT45A8P0DMV1 189 aa15.81■□□□□ 0.12
RAB40C-205ENST00000539661 CT45A9P0DMV2 189 aa15.81■□□□□ 0.12
RAB40C-205ENST00000539661 VAMP1P23763 118 aa15.81■□□□□ 0.12
RAB40C-205ENST00000539661 SERPINF1P36955 418 aa15.81■□□□□ 0.12
RAB40C-205ENST00000539661 EGR4Q05215 589 aa15.81■□□□□ 0.12
RAB40C-205ENST00000539661 CT45A2Q5DJT8 189 aa15.81■□□□□ 0.12
RAB40C-205ENST00000539661 TMEM200AQ86VY9 491 aa15.81■□□□□ 0.12
RAB40C-205ENST00000539661 BAHD1Q8TBE0 780 aaPredicted RBP15.81■□□□□ 0.12
RAB40C-205ENST00000539661 CASTOR1Q8WTX7 329 aa15.81■□□□□ 0.12
RAB40C-205ENST00000539661 TMEM231Q9H6L2 316 aa15.81■□□□□ 0.12
RAB40C-205ENST00000539661 SEC61A2Q9H9S3 476 aa15.81■□□□□ 0.12
RAB40C-205ENST00000539661 ZMAT3Q9HA38 289 aaKnown RBP15.81■□□□□ 0.12
RAB40C-205ENST00000539661 CGGBP1Q9UFW8 167 aaPredicted RBP15.81■□□□□ 0.12
RAB40C-205ENST00000539661 SHPKQ9UHJ6 478 aa15.81■□□□□ 0.12
RAB40C-205ENST00000539661 RAB22AQ9UL26 194 aa15.81■□□□□ 0.12
RAB40C-205ENST00000539661 F5P12259 2224 aa15.81■□□□□ 0.12
RAB40C-205ENST00000539661 C5orf52A6NGY3 159 aa15.81■□□□□ 0.12
RAB40C-205ENST00000539661 NFYBP25208 207 aa15.81■□□□□ 0.12
RAB40C-205ENST00000539661 EIF5AP63241 154 aaKnown RBP15.81■□□□□ 0.12
RAB40C-205ENST00000539661 TCEA2Q15560 299 aa15.81■□□□□ 0.12
RAB40C-205ENST00000539661 RNF212Q495C1 297 aa15.81■□□□□ 0.12
RAB40C-205ENST00000539661 TRAPPC6BQ86SZ2 158 aa15.81■□□□□ 0.12
RAB40C-205ENST00000539661 NKAIN3Q8N8D7 197 aa15.81■□□□□ 0.12
RAB40C-205ENST00000539661 ADAMTS17Q8TE56 1095 aa15.81■□□□□ 0.12
RAB40C-205ENST00000539661 GAL3ST1Q99999 423 aa15.81■□□□□ 0.12
RAB40C-205ENST00000539661 GTF2A1LQ9UNN4 478 aa15.81■□□□□ 0.12
RAB40C-205ENST00000539661 FITM1A5D6W6 292 aa15.8■□□□□ 0.12
RAB40C-205ENST00000539661 C1orf196B1AJZ1 125 aa15.8■□□□□ 0.12
RAB40C-205ENST00000539661 MUC1P15941 1255 aaPredicted RBP15.8■□□□□ 0.12
RAB40C-205ENST00000539661 RIDAP52758 137 aaKnown RBP15.8■□□□□ 0.12
RAB40C-205ENST00000539661 SNRPEP62304 92 aaKnown RBP15.8■□□□□ 0.12
RAB40C-205ENST00000539661 CSNK1A1LQ8N752 337 aa15.8■□□□□ 0.12
RAB40C-205ENST00000539661 ZSCAN4Q8NAM6 433 aaPredicted RBP15.8■□□□□ 0.12
RAB40C-205ENST00000539661 DTWD2Q8NBA8 298 aa15.8■□□□□ 0.12
RAB40C-205ENST00000539661 OR10R2Q8NGX6 335 aa15.8■□□□□ 0.12
RAB40C-205ENST00000539661 DPP7Q9UHL4 492 aa15.8■□□□□ 0.12
RAB40C-205ENST00000539661 GDF2Q9UK05 429 aaPredicted RBP15.8■□□□□ 0.12
RAB40C-205ENST00000539661 POMT1Q9Y6A1 747 aa15.8■□□□□ 0.12
RAB40C-205ENST00000539661 GPANK1O95872 356 aa15.8■□□□□ 0.12
RAB40C-205ENST00000539661 EN2P19622 333 aaPredicted RBP15.8■□□□□ 0.12
RAB40C-205ENST00000539661 FAM209BQ5JX69 171 aa15.8■□□□□ 0.12
RAB40C-205ENST00000539661 FNDC7Q5VTL7 733 aa15.8■□□□□ 0.12
RAB40C-205ENST00000539661 EIF5AL1Q6IS14 154 aaKnown RBP15.8■□□□□ 0.12
RAB40C-205ENST00000539661 SLC39A7Q92504 469 aa15.8■□□□□ 0.12
RAB40C-205ENST00000539661 NKX3-1Q99801 234 aaPredicted RBP15.8■□□□□ 0.12
RAB40C-205ENST00000539661 B9D1Q9UPM9 204 aa15.8■□□□□ 0.12
RAB40C-205ENST00000539661 COL6A3P12111 3177 aa15.79■□□□□ 0.12
RAB40C-205ENST00000539661 TBC1D3DA0A087WVF3 549 aa15.79■□□□□ 0.12
RAB40C-205ENST00000539661 C13orf42A0A1B0GVH6 325 aa15.79■□□□□ 0.12
RAB40C-205ENST00000539661 TBC1D3LB9A6J9 549 aa15.79■□□□□ 0.12
RAB40C-205ENST00000539661 RNASEK-C17orf49H0YIS7 233 aa15.79■□□□□ 0.12
RAB40C-205ENST00000539661 SCGNO76038 276 aa15.79■□□□□ 0.12
RAB40C-205ENST00000539661 FARS2O95363 451 aaKnown RBP15.79■□□□□ 0.12
RAB40C-205ENST00000539661 TBC1D3HP0C7X1 549 aa15.79■□□□□ 0.12
RAB40C-205ENST00000539661 DNASE1L1P49184 302 aa15.79■□□□□ 0.12
RAB40C-205ENST00000539661 SMCO1Q147U7 214 aa15.79■□□□□ 0.12
RAB40C-205ENST00000539661 C2orf27AQ580R0 203 aa15.79■□□□□ 0.12
RAB40C-205ENST00000539661 TBC1D3CQ6IPX1 549 aa15.79■□□□□ 0.12
RAB40C-205ENST00000539661 LYPD6Q86Y78 171 aa15.79■□□□□ 0.12
RAB40C-205ENST00000539661 TBC1D3Q8IZP1 549 aaPredicted RBP15.79■□□□□ 0.12
RAB40C-205ENST00000539661 JAGN1Q8N5M9 183 aa15.79■□□□□ 0.12
RAB40C-205ENST00000539661 ADAD2Q8NCV1 583 aaKnown RBP15.79■□□□□ 0.12
RAB40C-205ENST00000539661 OR10G6Q8NH81 332 aa15.79■□□□□ 0.12
RAB40C-205ENST00000539661 RRNAD1Q96FB5 475 aaKnown RBP15.79■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 61.8 ms