RNA–Protein interactions for RNA: ENST00000536782.2

TNFRSF1B-204, Transcript of TNF receptor superfamily member 1B, humanhuman

TSL 1 (best) BASIC

Gene TNFRSF1B, Length 557 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1B-204ENST00000536782 PLEK2Q9NYT0 353 aa16.6■□□□□ 0.25
TNFRSF1B-204ENST00000536782 IL19Q9UHD0 177 aa16.6■□□□□ 0.25
TNFRSF1B-204ENST00000536782 EGFL7Q9UHF1 273 aa16.6■□□□□ 0.25
TNFRSF1B-204ENST00000536782 CCDC22O60826 627 aa16.59■□□□□ 0.25
TNFRSF1B-204ENST00000536782 CTLA4P16410 223 aa16.59■□□□□ 0.25
TNFRSF1B-204ENST00000536782 AQP6Q13520 282 aa16.59■□□□□ 0.25
TNFRSF1B-204ENST00000536782 RBMS3Q6XE24 437 aaKnown RBP16.59■□□□□ 0.25
TNFRSF1B-204ENST00000536782 Q6ZR03 302 aa16.59■□□□□ 0.25
TNFRSF1B-204ENST00000536782 FAM122BQ7Z309 247 aa16.59■□□□□ 0.25
TNFRSF1B-204ENST00000536782 CYP4Z1Q86W10 505 aa16.59■□□□□ 0.25
TNFRSF1B-204ENST00000536782 LRRC28Q86X40 367 aaPredicted RBP16.59■□□□□ 0.25
TNFRSF1B-204ENST00000536782 DEFB108BQ8NET1 73 aa16.59■□□□□ 0.25
TNFRSF1B-204ENST00000536782 DVL3Q92997 716 aaPredicted RBP16.59■□□□□ 0.25
TNFRSF1B-204ENST00000536782 POP5Q969H6 163 aaKnown RBP16.59■□□□□ 0.25
TNFRSF1B-204ENST00000536782 HAVCR1Q96D42 359 aa16.59■□□□□ 0.25
TNFRSF1B-204ENST00000536782 HSH2DQ96JZ2 352 aa16.59■□□□□ 0.25
TNFRSF1B-204ENST00000536782 ANKRD19PQ9H560 264 aa16.59■□□□□ 0.25
TNFRSF1B-204ENST00000536782 MMP26Q9NRE1 261 aa16.59■□□□□ 0.25
TNFRSF1B-204ENST00000536782 ARMCX1Q9P291 453 aa16.59■□□□□ 0.25
TNFRSF1B-204ENST00000536782 PPP1R3CQ9UQK1 317 aa16.59■□□□□ 0.25
TNFRSF1B-204ENST00000536782 TMEM5Q9Y2B1 443 aa16.59■□□□□ 0.25
TNFRSF1B-204ENST00000536782 POLR3KQ9Y2Y1 108 aaPredicted RBP16.59■□□□□ 0.25
TNFRSF1B-204ENST00000536782 STARD10Q9Y365 291 aa16.59■□□□□ 0.25
TNFRSF1B-204ENST00000536782 SURF4O15260 269 aa16.58■□□□□ 0.24
TNFRSF1B-204ENST00000536782 SERPINA1P01009 418 aa16.58■□□□□ 0.24
TNFRSF1B-204ENST00000536782 ZNF26P17031 533 aaPredicted RBP16.58■□□□□ 0.24
TNFRSF1B-204ENST00000536782 EGR1P18146 543 aa16.58■□□□□ 0.24
TNFRSF1B-204ENST00000536782 BTG1P62324 171 aa16.58■□□□□ 0.24
TNFRSF1B-204ENST00000536782 UBA52P62987 128 aaKnown RBP16.58■□□□□ 0.24
TNFRSF1B-204ENST00000536782 ARMCX4Q5H9R4 360 aa16.58■□□□□ 0.24
TNFRSF1B-204ENST00000536782 C1orf94Q6P1W5 598 aa16.58■□□□□ 0.24
TNFRSF1B-204ENST00000536782 ITLN1Q8WWA0 313 aa16.58■□□□□ 0.24
TNFRSF1B-204ENST00000536782 PTP4A1Q93096 173 aa16.58■□□□□ 0.24
TNFRSF1B-204ENST00000536782 RERGLQ9H628 205 aa16.58■□□□□ 0.24
TNFRSF1B-204ENST00000536782 NMNAT1Q9HAN9 279 aaPredicted RBP16.58■□□□□ 0.24
TNFRSF1B-204ENST00000536782 PPIAL4AQ9Y536 164 aa16.58■□□□□ 0.24
TNFRSF1B-204ENST00000536782 AUP1Q9Y679 476 aa16.58■□□□□ 0.24
TNFRSF1B-204ENST00000536782 TRAPPC2LH3BP13 241 aa16.57■□□□□ 0.24
TNFRSF1B-204ENST00000536782 WIPF1O43516 503 aa16.57■□□□□ 0.24
TNFRSF1B-204ENST00000536782 SLC16A7O60669 478 aa16.57■□□□□ 0.24
TNFRSF1B-204ENST00000536782 KHDRBS3O75525 346 aaKnown RBP16.57■□□□□ 0.24
TNFRSF1B-204ENST00000536782 RBMXP38159 391 aaKnown RBP16.57■□□□□ 0.24
TNFRSF1B-204ENST00000536782 SLC6A9P48067 706 aa16.57■□□□□ 0.24
TNFRSF1B-204ENST00000536782 LSM6P62312 80 aaKnown RBP16.57■□□□□ 0.24
TNFRSF1B-204ENST00000536782 ZNF154Q13106 437 aa16.57■□□□□ 0.24
TNFRSF1B-204ENST00000536782 KRR1Q13601 381 aaKnown RBP16.57■□□□□ 0.24
TNFRSF1B-204ENST00000536782 ZMYND11Q15326 602 aa16.57■□□□□ 0.24
TNFRSF1B-204ENST00000536782 AWAT1Q58HT5 328 aa16.57■□□□□ 0.24
TNFRSF1B-204ENST00000536782 GLB1L2Q8IW92 636 aa16.57■□□□□ 0.24
TNFRSF1B-204ENST00000536782 SLC7A6Q92536 515 aa16.57■□□□□ 0.24
TNFRSF1B-204ENST00000536782 RASD2Q96D21 266 aa16.57■□□□□ 0.24
TNFRSF1B-204ENST00000536782 FAM46AQ96IP4 442 aaKnown RBP16.57■□□□□ 0.24
TNFRSF1B-204ENST00000536782 OR2V2Q96R30 315 aa16.57■□□□□ 0.24
TNFRSF1B-204ENST00000536782 SIGLEC11Q96RL6 698 aa16.57■□□□□ 0.24
TNFRSF1B-204ENST00000536782 HOPXQ9BPY8 73 aaPredicted RBP16.57■□□□□ 0.24
TNFRSF1B-204ENST00000536782 NSRP1Q9H0G5 558 aaKnown RBP16.57■□□□□ 0.24
TNFRSF1B-204ENST00000536782 SYT4Q9H2B2 425 aa16.57■□□□□ 0.24
TNFRSF1B-204ENST00000536782 ASH2LQ9UBL3 628 aa16.57■□□□□ 0.24
TNFRSF1B-204ENST00000536782 NUP50Q9UKX7 468 aa16.57■□□□□ 0.24
TNFRSF1B-204ENST00000536782 COA3Q9Y2R0 106 aaPredicted RBP16.57■□□□□ 0.24
TNFRSF1B-204ENST00000536782 J3QW42 95 aa16.56■□□□□ 0.24
TNFRSF1B-204ENST00000536782 NME4O00746 187 aa16.56■□□□□ 0.24
TNFRSF1B-204ENST00000536782 PTP4A3O75365 173 aa16.56■□□□□ 0.24
TNFRSF1B-204ENST00000536782 NDUFB2O95178 105 aa16.56■□□□□ 0.24
TNFRSF1B-204ENST00000536782 COX4I1P13073 169 aa16.56■□□□□ 0.24
TNFRSF1B-204ENST00000536782 RAC2P15153 192 aa16.56■□□□□ 0.24
TNFRSF1B-204ENST00000536782 ZNF12P17014 697 aa16.56■□□□□ 0.24
TNFRSF1B-204ENST00000536782 SDHAP31040 664 aa16.56■□□□□ 0.24
TNFRSF1B-204ENST00000536782 MDH2P40926 338 aaKnown RBP16.56■□□□□ 0.24
TNFRSF1B-204ENST00000536782 SLC7A2P52569 658 aa16.56■□□□□ 0.24
TNFRSF1B-204ENST00000536782 SEC61A1P61619 476 aaKnown RBP16.56■□□□□ 0.24
TNFRSF1B-204ENST00000536782 OTPQ5XKR4 325 aa16.56■□□□□ 0.24
TNFRSF1B-204ENST00000536782 GPR139Q6DWJ6 353 aa16.56■□□□□ 0.24
TNFRSF1B-204ENST00000536782 SIGLECL1Q8N7X8 197 aa16.56■□□□□ 0.24
TNFRSF1B-204ENST00000536782 OR1F12Q8NHA8 337 aa16.56■□□□□ 0.24
TNFRSF1B-204ENST00000536782 SLC7A13Q8TCU3 470 aa16.56■□□□□ 0.24
TNFRSF1B-204ENST00000536782 NRIP3Q9NQ35 241 aa16.56■□□□□ 0.24
TNFRSF1B-204ENST00000536782 SIGLEC7Q9Y286 467 aa16.56■□□□□ 0.24
TNFRSF1B-204ENST00000536782 INSIG2Q9Y5U4 225 aa16.56■□□□□ 0.24
TNFRSF1B-204ENST00000536782 ENPP4Q9Y6X5 453 aa16.56■□□□□ 0.24
TNFRSF1B-204ENST00000536782 TRRAPQ9Y4A5 3859 aa16.56■□□□□ 0.24
TNFRSF1B-204ENST00000536782 OR6C6A6NF89 314 aa16.55■□□□□ 0.24
TNFRSF1B-204ENST00000536782 A8MXK9 166 aa16.55■□□□□ 0.24
TNFRSF1B-204ENST00000536782 RGS6P49758 472 aa16.55■□□□□ 0.24
TNFRSF1B-204ENST00000536782 GSK3BP49841 420 aa16.55■□□□□ 0.24
TNFRSF1B-204ENST00000536782 ERFP50548 548 aa16.55■□□□□ 0.24
TNFRSF1B-204ENST00000536782 CCDC92Q53HC0 331 aaPredicted RBP16.55■□□□□ 0.24
TNFRSF1B-204ENST00000536782 ESCO2Q56NI9 601 aa16.55■□□□□ 0.24
TNFRSF1B-204ENST00000536782 TSEN54Q7Z6J9 526 aaKnown RBP16.55■□□□□ 0.24
TNFRSF1B-204ENST00000536782 ADCK1Q86TW2 530 aa16.55■□□□□ 0.24
TNFRSF1B-204ENST00000536782 MUC20Q8N307 709 aaPredicted RBP16.55■□□□□ 0.24
TNFRSF1B-204ENST00000536782 ATG16L2Q8NAA4 619 aa16.55■□□□□ 0.24
TNFRSF1B-204ENST00000536782 OR5L1Q8NGL2 311 aa16.55■□□□□ 0.24
TNFRSF1B-204ENST00000536782 FAM162AQ96A26 154 aa16.55■□□□□ 0.24
TNFRSF1B-204ENST00000536782 GPX7Q96SL4 187 aaPredicted RBP16.55■□□□□ 0.24
TNFRSF1B-204ENST00000536782 GPA33Q99795 319 aa16.55■□□□□ 0.24
TNFRSF1B-204ENST00000536782 MRI1Q9BV20 369 aa16.55■□□□□ 0.24
TNFRSF1B-204ENST00000536782 GCM1Q9NP62 436 aa16.55■□□□□ 0.24
TNFRSF1B-204ENST00000536782 VSX1Q9NZR4 365 aaPredicted RBP16.55■□□□□ 0.24
TNFRSF1B-204ENST00000536782 ATPIF1Q9UII2 106 aa16.55■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms