RNA–Protein interactions for RNA: ENST00000535399.1

SFSWAP-204, Transcript of splicing factor SWAP, humanhuman

TSL 2

Gene SFSWAP, Length 778 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-204ENST00000535399 SLC7A6Q92536 515 aa19.53■□□□□ 0.72
SFSWAP-204ENST00000535399 C4orf45Q96LM5 186 aa19.53■□□□□ 0.72
SFSWAP-204ENST00000535399 CIB1Q99828 191 aa19.53■□□□□ 0.72
SFSWAP-204ENST00000535399 SYT3Q9BQG1 590 aa19.53■□□□□ 0.72
SFSWAP-204ENST00000535399 EIF3KQ9UBQ5 218 aaKnown RBP19.53■□□□□ 0.72
SFSWAP-204ENST00000535399 ATPIF1Q9UII2 106 aa19.53■□□□□ 0.72
SFSWAP-204ENST00000535399 COMMD3-BMI1R4GMX3 469 aa19.53■□□□□ 0.72
SFSWAP-204ENST00000535399 LCKP06239 509 aa19.52■□□□□ 0.72
SFSWAP-204ENST00000535399 ZNF250P15622 560 aa19.52■□□□□ 0.72
SFSWAP-204ENST00000535399 ZNF823P16415 610 aa19.52■□□□□ 0.72
SFSWAP-204ENST00000535399 IGFBP5P24593 272 aa19.52■□□□□ 0.72
SFSWAP-204ENST00000535399 EPHA2P29317 976 aa19.52■□□□□ 0.72
SFSWAP-204ENST00000535399 FMO3P31513 532 aa19.52■□□□□ 0.72
SFSWAP-204ENST00000535399 GABPB1Q06547 395 aaPredicted RBP19.52■□□□□ 0.72
SFSWAP-204ENST00000535399 ELFN2Q5R3F8 820 aa19.52■□□□□ 0.72
SFSWAP-204ENST00000535399 PLBD1Q6P4A8 553 aa19.52■□□□□ 0.72
SFSWAP-204ENST00000535399 RFPL4BQ6ZWI9 263 aa19.52■□□□□ 0.72
SFSWAP-204ENST00000535399 OR1J1Q8NGS3 322 aa19.52■□□□□ 0.72
SFSWAP-204ENST00000535399 COQ7Q99807 217 aa19.52■□□□□ 0.72
SFSWAP-204ENST00000535399 CDADC1Q9BWV3 514 aa19.52■□□□□ 0.72
SFSWAP-204ENST00000535399 OSBPL10Q9BXB5 764 aa19.52■□□□□ 0.72
SFSWAP-204ENST00000535399 HDHD2Q9H0R4 259 aa19.52■□□□□ 0.72
SFSWAP-204ENST00000535399 WDR76Q9H967 626 aa19.52■□□□□ 0.72
SFSWAP-204ENST00000535399 BARX1Q9HBU1 254 aaPredicted RBP19.52■□□□□ 0.72
SFSWAP-204ENST00000535399 HINT3Q9NQE9 182 aaKnown RBP19.52■□□□□ 0.72
SFSWAP-204ENST00000535399 MYEF2Q9P2K5 600 aaKnown RBP19.52■□□□□ 0.72
SFSWAP-204ENST00000535399 PRR23D1E9PI22 279 aaPredicted RBP19.51■□□□□ 0.71
SFSWAP-204ENST00000535399 NGFP01138 241 aa19.51■□□□□ 0.71
SFSWAP-204ENST00000535399 DBHP09172 617 aa19.51■□□□□ 0.71
SFSWAP-204ENST00000535399 PRR23D2P0DMB1 279 aaPredicted RBP19.51■□□□□ 0.71
SFSWAP-204ENST00000535399 PAICSP22234 425 aaKnown RBP19.51■□□□□ 0.71
SFSWAP-204ENST00000535399 RPS27P42677 84 aaKnown RBP19.51■□□□□ 0.71
SFSWAP-204ENST00000535399 PPOXP50336 477 aa19.51■□□□□ 0.71
SFSWAP-204ENST00000535399 PCK2Q16822 640 aa19.51■□□□□ 0.71
SFSWAP-204ENST00000535399 LURAP1LQ8IV03 231 aa19.51■□□□□ 0.71
SFSWAP-204ENST00000535399 OR6K6Q8NGW6 343 aa19.51■□□□□ 0.71
SFSWAP-204ENST00000535399 OR2AJ1Q8NGZ0 328 aa19.51■□□□□ 0.71
SFSWAP-204ENST00000535399 OTULINQ96BN8 352 aa19.51■□□□□ 0.71
SFSWAP-204ENST00000535399 Q96MF0 132 aa19.51■□□□□ 0.71
SFSWAP-204ENST00000535399 TMUB1Q9BVT8 246 aa19.51■□□□□ 0.71
SFSWAP-204ENST00000535399 TEX12Q9BXU0 123 aa19.51■□□□□ 0.71
SFSWAP-204ENST00000535399 PNRC2Q9NPJ4 139 aaKnown RBP19.51■□□□□ 0.71
SFSWAP-204ENST00000535399 TVP23BQ9NYZ1 205 aa19.51■□□□□ 0.71
SFSWAP-204ENST00000535399 FBXO9Q9UK97 447 aaPredicted RBP19.51■□□□□ 0.71
SFSWAP-204ENST00000535399 ZNF469Q96JG9 3925 aaPredicted RBP19.51■□□□□ 0.71
SFSWAP-204ENST00000535399 ARFGEF3Q5TH69 2177 aa19.51■□□□□ 0.71
SFSWAP-204ENST00000535399 ZAR1LA6NP61 321 aa19.5■□□□□ 0.71
SFSWAP-204ENST00000535399 ABHD16AO95870 558 aa19.5■□□□□ 0.71
SFSWAP-204ENST00000535399 ENTPD1P49961 510 aa19.5■□□□□ 0.71
SFSWAP-204ENST00000535399 BLVRAP53004 296 aa19.5■□□□□ 0.71
SFSWAP-204ENST00000535399 SNAPC1Q16533 368 aa19.5■□□□□ 0.71
SFSWAP-204ENST00000535399 ZSCAN26Q16670 478 aa19.5■□□□□ 0.71
SFSWAP-204ENST00000535399 RSPO1Q2MKA7 263 aaPredicted RBP19.5■□□□□ 0.71
SFSWAP-204ENST00000535399 KRTAP27-1Q3LI81 207 aa19.5■□□□□ 0.71
SFSWAP-204ENST00000535399 TEX30Q5JUR7 227 aa19.5■□□□□ 0.71
SFSWAP-204ENST00000535399 SLX4IPQ5VYV7 408 aa19.5■□□□□ 0.71
SFSWAP-204ENST00000535399 CPOQ8IVL8 374 aa19.5■□□□□ 0.71
SFSWAP-204ENST00000535399 ABHD4Q8TB40 342 aa19.5■□□□□ 0.71
SFSWAP-204ENST00000535399 PLEKHA8Q96JA3 519 aa19.5■□□□□ 0.71
SFSWAP-204ENST00000535399 MAP6Q96JE9 813 aa19.5■□□□□ 0.71
SFSWAP-204ENST00000535399 SORCS2Q96PQ0 1159 aa19.5■□□□□ 0.71
SFSWAP-204ENST00000535399 RBM4BQ9BQ04 359 aaKnown RBP19.5■□□□□ 0.71
SFSWAP-204ENST00000535399 OR51V1Q9H2C8 321 aa19.5■□□□□ 0.71
SFSWAP-204ENST00000535399 ELOVL3Q9HB03 270 aa19.5■□□□□ 0.71
SFSWAP-204ENST00000535399 TBCCD1Q9NVR7 557 aa19.5■□□□□ 0.71
SFSWAP-204ENST00000535399 DUSP13Q9UII6 198 aa19.5■□□□□ 0.71
SFSWAP-204ENST00000535399 IGLV3-9A0A075B6K5 115 aa19.49■□□□□ 0.71
SFSWAP-204ENST00000535399 GLCEO94923 617 aa19.49■□□□□ 0.71
SFSWAP-204ENST00000535399 CLPTM1O96005 669 aa19.49■□□□□ 0.71
SFSWAP-204ENST00000535399 POLR2IP36954 125 aaKnown RBP19.49■□□□□ 0.71
SFSWAP-204ENST00000535399 EFNA4P52798 201 aa19.49■□□□□ 0.71
SFSWAP-204ENST00000535399 PPP1CBP62140 327 aa19.49■□□□□ 0.71
SFSWAP-204ENST00000535399 SPATA46Q5T0L3 261 aa19.49■□□□□ 0.71
SFSWAP-204ENST00000535399 C12orf73Q69YU5 71 aa19.49■□□□□ 0.71
SFSWAP-204ENST00000535399 UNQ6126/PRO20091Q6UXV3 157 aa19.49■□□□□ 0.71
SFSWAP-204ENST00000535399 BBS1Q8NFJ9 593 aa19.49■□□□□ 0.71
SFSWAP-204ENST00000535399 OR10S1Q8NGN2 331 aa19.49■□□□□ 0.71
SFSWAP-204ENST00000535399 SYNPRQ8TBG9 265 aa19.49■□□□□ 0.71
SFSWAP-204ENST00000535399 SLC25A40Q8TBP6 338 aa19.49■□□□□ 0.71
SFSWAP-204ENST00000535399 MARS2Q96GW9 593 aaKnown RBP19.49■□□□□ 0.71
SFSWAP-204ENST00000535399 PITX2Q99697 317 aa19.49■□□□□ 0.71
SFSWAP-204ENST00000535399 GABARAPL3Q9BY60 117 aa19.49■□□□□ 0.71
SFSWAP-204ENST00000535399 MARCH7Q9H992 704 aa19.49■□□□□ 0.71
SFSWAP-204ENST00000535399 ENOPH1Q9UHY7 261 aa19.49■□□□□ 0.71
SFSWAP-204ENST00000535399 GRIP1Q9Y3R0 1128 aa19.49■□□□□ 0.71
SFSWAP-204ENST00000535399 ZNF593O00488 134 aaPredicted RBP19.48■□□□□ 0.71
SFSWAP-204ENST00000535399 SPARCP09486 303 aa19.48■□□□□ 0.71
SFSWAP-204ENST00000535399 GSTT1P30711 240 aa19.48■□□□□ 0.71
SFSWAP-204ENST00000535399 ALDH3B1P43353 468 aa19.48■□□□□ 0.71
SFSWAP-204ENST00000535399 MAD2L1BPQ15013 274 aaPredicted RBP19.48■□□□□ 0.71
SFSWAP-204ENST00000535399 CLEC12BQ2HXU8 276 aa19.48■□□□□ 0.71
SFSWAP-204ENST00000535399 TMEM154Q6P9G4 183 aa19.48■□□□□ 0.71
SFSWAP-204ENST00000535399 ARL9Q6T311 187 aa19.48■□□□□ 0.71
SFSWAP-204ENST00000535399 DNM1P46Q6ZS02 220 aa19.48■□□□□ 0.71
SFSWAP-204ENST00000535399 C1orf174Q8IYL3 243 aa19.48■□□□□ 0.71
SFSWAP-204ENST00000535399 ZCCHC24Q8N2G6 241 aaKnown RBP19.48■□□□□ 0.71
SFSWAP-204ENST00000535399 PQLC1Q8N2U9 271 aa19.48■□□□□ 0.71
SFSWAP-204ENST00000535399 DCLRE1CQ96SD1 692 aaKnown RBP19.48■□□□□ 0.71
SFSWAP-204ENST00000535399 VRK1Q99986 396 aaPredicted RBP19.48■□□□□ 0.71
SFSWAP-204ENST00000535399 DYNLRB1Q9NP97 96 aa19.48■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms