RNA–Protein interactions for RNA: ENST00000516543.1

SNORA40.14-201, Transcript of small nucleolar RNA, H/ACA box 40, humanhuman

BASIC

Gene SNORA40, Length 86 nt, Biotype snoRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORA40.14-201ENST00000516543 ERLIN2O94905 339 aa0.27□□□□□ -2.37
SNORA40.14-201ENST00000516543 GLSO94925 669 aaPredicted RBP0.27□□□□□ -2.37
SNORA40.14-201ENST00000516543 DIRAS3O95661 229 aa0.27□□□□□ -2.37
SNORA40.14-201ENST00000516543 C2P06681 752 aa0.27□□□□□ -2.37
SNORA40.14-201ENST00000516543 CTSLP07711 333 aa0.27□□□□□ -2.37
SNORA40.14-201ENST00000516543 UQCRFS1P1P0C7P4 283 aa0.27□□□□□ -2.37
SNORA40.14-201ENST00000516543 CD37P11049 281 aa0.27□□□□□ -2.37
SNORA40.14-201ENST00000516543 ACTG2P63267 376 aa0.27□□□□□ -2.37
SNORA40.14-201ENST00000516543 ELF3P78545 371 aaPredicted RBP0.27□□□□□ -2.37
SNORA40.14-201ENST00000516543 PDZK1Q5T2W1 519 aa0.27□□□□□ -2.37
SNORA40.14-201ENST00000516543 ZNF470Q6ECI4 717 aa0.27□□□□□ -2.37
SNORA40.14-201ENST00000516543 DEGS2Q6QHC5 323 aa0.27□□□□□ -2.37
SNORA40.14-201ENST00000516543 DAZ4Q86SG3 579 aaKnown RBP0.27□□□□□ -2.37
SNORA40.14-201ENST00000516543 OR10AD1Q8NGE0 317 aa0.27□□□□□ -2.37
SNORA40.14-201ENST00000516543 GALNT14Q96FL9 552 aa0.27□□□□□ -2.37
SNORA40.14-201ENST00000516543 GPR82Q96P67 336 aa0.27□□□□□ -2.37
SNORA40.14-201ENST00000516543 CHCHD7Q9BUK0 85 aa0.27□□□□□ -2.37
SNORA40.14-201ENST00000516543 KRT23Q9C075 422 aa0.27□□□□□ -2.37
SNORA40.14-201ENST00000516543 DUSP21Q9H596 190 aa0.27□□□□□ -2.37
SNORA40.14-201ENST00000516543 CSNK1G1Q9HCP0 422 aa0.27□□□□□ -2.37
SNORA40.14-201ENST00000516543 DAZ1Q9NQZ3 744 aaKnown RBP0.27□□□□□ -2.37
SNORA40.14-201ENST00000516543 KNSTRNQ9Y448 316 aa0.27□□□□□ -2.37
SNORA40.14-201ENST00000516543 U3KQV3 271 aa0.27□□□□□ -2.37
SNORA40.14-201ENST00000516543 PLXNA3P51805 1871 aa0.27□□□□□ -2.37
SNORA40.14-201ENST00000516543 MED13Q9UHV7 2174 aa0.26□□□□□ -2.37
SNORA40.14-201ENST00000516543 ZNF816-ZNF321PA0A0X1KG74 233 aa0.26□□□□□ -2.37
SNORA40.14-201ENST00000516543 RGSL1A5PLK6 1076 aa0.26□□□□□ -2.37
SNORA40.14-201ENST00000516543 PLIN3O60664 434 aa0.26□□□□□ -2.37
SNORA40.14-201ENST00000516543 EIF1BO60739 113 aaKnown RBP0.26□□□□□ -2.37
SNORA40.14-201ENST00000516543 RAB3AP20336 220 aa0.26□□□□□ -2.37
SNORA40.14-201ENST00000516543 ATP6V1C1P21283 382 aa0.26□□□□□ -2.37
SNORA40.14-201ENST00000516543 VHLP40337 213 aa0.26□□□□□ -2.37
SNORA40.14-201ENST00000516543 EIF1P41567 113 aaKnown RBP0.26□□□□□ -2.37
SNORA40.14-201ENST00000516543 HCAR3P49019 387 aa0.26□□□□□ -2.37
SNORA40.14-201ENST00000516543 ACOT2P49753 483 aa0.26□□□□□ -2.37
SNORA40.14-201ENST00000516543 RPL23P62829 140 aaKnown RBP0.26□□□□□ -2.37
SNORA40.14-201ENST00000516543 TPBGQ13641 420 aa0.26□□□□□ -2.37
SNORA40.14-201ENST00000516543 ZNF141Q15928 474 aa0.26□□□□□ -2.37
SNORA40.14-201ENST00000516543 TCEAL5Q5H9L2 206 aa0.26□□□□□ -2.37
SNORA40.14-201ENST00000516543 SOHLH1Q5JUK2 328 aa0.26□□□□□ -2.37
SNORA40.14-201ENST00000516543 TMEM25Q86YD3 366 aa0.26□□□□□ -2.37
SNORA40.14-201ENST00000516543 TCEAL3Q969E4 200 aa0.26□□□□□ -2.37
SNORA40.14-201ENST00000516543 CNDP1Q96KN2 507 aa0.26□□□□□ -2.37
SNORA40.14-201ENST00000516543 SERPINB12Q96P63 405 aa0.26□□□□□ -2.37
SNORA40.14-201ENST00000516543 CNN2Q99439 309 aaKnown RBP0.26□□□□□ -2.37
SNORA40.14-201ENST00000516543 SAMD10Q9BYL1 202 aa0.26□□□□□ -2.37
SNORA40.14-201ENST00000516543 CWH43Q9H720 699 aa0.26□□□□□ -2.37
SNORA40.14-201ENST00000516543 NIPAL2Q9H841 368 aa0.26□□□□□ -2.37
SNORA40.14-201ENST00000516543 SLC17A7Q9P2U7 560 aa0.26□□□□□ -2.37
SNORA40.14-201ENST00000516543 NPTNQ9Y639 398 aa0.26□□□□□ -2.37
SNORA40.14-201ENST00000516543 VWA8A3KMH1 1905 aa0.26□□□□□ -2.37
SNORA40.14-201ENST00000516543 PALLDQ8WX93 1383 aa0.25□□□□□ -2.37
SNORA40.14-201ENST00000516543 CLDN34H7C241 214 aa0.25□□□□□ -2.37
SNORA40.14-201ENST00000516543 GOSR2O14653 212 aa0.25□□□□□ -2.37
SNORA40.14-201ENST00000516543 ARPC3O15145 178 aa0.25□□□□□ -2.37
SNORA40.14-201ENST00000516543 SCELO95171 688 aa0.25□□□□□ -2.37
SNORA40.14-201ENST00000516543 CPSF4O95639 269 aaKnown RBP0.25□□□□□ -2.37
SNORA40.14-201ENST00000516543 PAHP00439 452 aa0.25□□□□□ -2.37
SNORA40.14-201ENST00000516543 FGGP02679 453 aa0.25□□□□□ -2.37
SNORA40.14-201ENST00000516543 P0DMU3 169 aa0.25□□□□□ -2.37
SNORA40.14-201ENST00000516543 FAM231AP0DMU4 169 aa0.25□□□□□ -2.37
SNORA40.14-201ENST00000516543 FAM231CP0DMU5 169 aa0.25□□□□□ -2.37
SNORA40.14-201ENST00000516543 EPB41P11171 864 aaKnown RBP0.25□□□□□ -2.37
SNORA40.14-201ENST00000516543 CHI3L1P36222 383 aaPredicted RBP0.25□□□□□ -2.37
SNORA40.14-201ENST00000516543 P2RX1P51575 399 aa0.25□□□□□ -2.37
SNORA40.14-201ENST00000516543 TWF1Q12792 350 aa0.25□□□□□ -2.37
SNORA40.14-201ENST00000516543 BIKQ13323 160 aa0.25□□□□□ -2.37
SNORA40.14-201ENST00000516543 FAM131AQ6UXB0 335 aa0.25□□□□□ -2.37
SNORA40.14-201ENST00000516543 NKAIN4Q8IVV8 208 aa0.25□□□□□ -2.37
SNORA40.14-201ENST00000516543 LINC00469Q8N7U9 141 aa0.25□□□□□ -2.37
SNORA40.14-201ENST00000516543 COX18Q8N8Q8 333 aa0.25□□□□□ -2.37
SNORA40.14-201ENST00000516543 ACTL9Q8TC94 416 aa0.25□□□□□ -2.37
SNORA40.14-201ENST00000516543 LRRC29Q8WV35 223 aa0.25□□□□□ -2.37
SNORA40.14-201ENST00000516543 TRIM44Q96DX7 344 aaPredicted RBP0.25□□□□□ -2.37
SNORA40.14-201ENST00000516543 FMO2Q99518 471 aa0.25□□□□□ -2.37
SNORA40.14-201ENST00000516543 NMRAL1Q9HBL8 299 aa0.25□□□□□ -2.37
SNORA40.14-201ENST00000516543 RHBDL2Q9NX52 303 aa0.25□□□□□ -2.37
SNORA40.14-201ENST00000516543 RNF14Q9UBS8 474 aa0.25□□□□□ -2.37
SNORA40.14-201ENST00000516543 TRMT112Q9UI30 125 aaKnown RBP0.25□□□□□ -2.37
SNORA40.14-201ENST00000516543 VANGL2Q9ULK5 521 aa0.25□□□□□ -2.37
SNORA40.14-201ENST00000516543 COL6A6A6NMZ7 2263 aa0.25□□□□□ -2.37
SNORA40.14-201ENST00000516543 CNTNAP1P78357 1384 aa0.24□□□□□ -2.37
SNORA40.14-201ENST00000516543 C15orf65H3BRN8 121 aa0.24□□□□□ -2.37
SNORA40.14-201ENST00000516543 NVLO15381 856 aaKnown RBP0.24□□□□□ -2.37
SNORA40.14-201ENST00000516543 RDH16O75452 317 aa0.24□□□□□ -2.37
SNORA40.14-201ENST00000516543 NCF1P14598 390 aaPredicted RBP0.24□□□□□ -2.37
SNORA40.14-201ENST00000516543 GAP43P17677 238 aa0.24□□□□□ -2.37
SNORA40.14-201ENST00000516543 IL10P22301 178 aa0.24□□□□□ -2.37
SNORA40.14-201ENST00000516543 CD1CP29017 333 aa0.24□□□□□ -2.37
SNORA40.14-201ENST00000516543 CBX1P83916 185 aa0.24□□□□□ -2.37
SNORA40.14-201ENST00000516543 PPIDQ08752 370 aaKnown RBP0.24□□□□□ -2.37
SNORA40.14-201ENST00000516543 SIGLEC14Q08ET2 396 aa0.24□□□□□ -2.37
SNORA40.14-201ENST00000516543 ECH1Q13011 328 aa0.24□□□□□ -2.37
SNORA40.14-201ENST00000516543 MRPL28Q13084 256 aaKnown RBP0.24□□□□□ -2.37
SNORA40.14-201ENST00000516543 KRTAP25-1Q3LHN0 102 aa0.24□□□□□ -2.37
SNORA40.14-201ENST00000516543 LUZP6Q538Z0 58 aa0.24□□□□□ -2.37
SNORA40.14-201ENST00000516543 ZNF660Q6AZW8 331 aaPredicted RBP0.24□□□□□ -2.37
SNORA40.14-201ENST00000516543 ZFAND6Q6FIF0 208 aa0.24□□□□□ -2.37
SNORA40.14-201ENST00000516543 APOBEC3HQ6NTF7 200 aaKnown RBP0.24□□□□□ -2.37
SNORA40.14-201ENST00000516543 SLC25A48Q6ZT89 311 aaKnown RBP0.24□□□□□ -2.37
Retrieved 100 of 20,778 RNA–protein pairs in 58.4 ms