RNA–Protein interactions for RNA: ENST00000490099.5

TMEM39A-210, Transcript of transmembrane protein 39A, humanhuman

TSL 3

Gene TMEM39A, Length 868 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-210ENST00000490099 RAB3IPQ96QF0 476 aaPredicted RBP8.25□□□□□ -1.09
TMEM39A-210ENST00000490099 DIRC2Q96SL1 478 aa8.25□□□□□ -1.09
TMEM39A-210ENST00000490099 ELOVL3Q9HB03 270 aa8.25□□□□□ -1.09
TMEM39A-210ENST00000490099 EMC7Q9NPA0 242 aa8.25□□□□□ -1.09
TMEM39A-210ENST00000490099 G6PC2Q9NQR9 355 aa8.25□□□□□ -1.09
TMEM39A-210ENST00000490099 ATPIF1Q9UII2 106 aa8.25□□□□□ -1.09
TMEM39A-210ENST00000490099 ZDHHC8Q9ULC8 765 aa8.25□□□□□ -1.09
TMEM39A-210ENST00000490099 NDRG4Q9ULP0 352 aaKnown RBP8.25□□□□□ -1.09
TMEM39A-210ENST00000490099 PRPF19Q9UMS4 504 aaKnown RBP8.25□□□□□ -1.09
TMEM39A-210ENST00000490099 FAM32AQ9Y421 112 aaKnown RBP8.25□□□□□ -1.09
TMEM39A-210ENST00000490099 CACNG2Q9Y698 323 aa8.25□□□□□ -1.09
TMEM39A-210ENST00000490099 IGLV1-36A0A0B4J1U3 117 aa8.24□□□□□ -1.09
TMEM39A-210ENST00000490099 TRAV20A0A0B4J274 112 aa8.24□□□□□ -1.09
TMEM39A-210ENST00000490099 A0A1B0GWJ7 208 aa8.24□□□□□ -1.09
TMEM39A-210ENST00000490099 J3QW42 95 aa8.24□□□□□ -1.09
TMEM39A-210ENST00000490099 DCTN6O00399 190 aa8.24□□□□□ -1.09
TMEM39A-210ENST00000490099 XKRYO14609 159 aa8.24□□□□□ -1.09
TMEM39A-210ENST00000490099 CDC14BO60729 498 aa8.24□□□□□ -1.09
TMEM39A-210ENST00000490099 KHDRBS3O75525 346 aaKnown RBP8.24□□□□□ -1.09
TMEM39A-210ENST00000490099 DNAJC8O75937 253 aaPredicted RBP8.24□□□□□ -1.09
TMEM39A-210ENST00000490099 MPZL1O95297 269 aa8.24□□□□□ -1.09
TMEM39A-210ENST00000490099 ANPEPP15144 967 aa8.24□□□□□ -1.09
TMEM39A-210ENST00000490099 KITLGP21583 273 aa8.24□□□□□ -1.09
TMEM39A-210ENST00000490099 CCNOP22674 350 aa8.24□□□□□ -1.09
TMEM39A-210ENST00000490099 GCH1P30793 250 aa8.24□□□□□ -1.09
TMEM39A-210ENST00000490099 SMIM11AP58511 58 aa8.24□□□□□ -1.09
TMEM39A-210ENST00000490099 AQP6Q13520 282 aa8.24□□□□□ -1.09
TMEM39A-210ENST00000490099 KRR1Q13601 381 aaKnown RBP8.24□□□□□ -1.09
TMEM39A-210ENST00000490099 RSPO1Q2MKA7 263 aaPredicted RBP8.24□□□□□ -1.09
TMEM39A-210ENST00000490099 RFX4Q33E94 735 aa8.24□□□□□ -1.09
TMEM39A-210ENST00000490099 CCDC92Q53HC0 331 aaPredicted RBP8.24□□□□□ -1.09
TMEM39A-210ENST00000490099 SPRNQ5BIV9 151 aa8.24□□□□□ -1.09
TMEM39A-210ENST00000490099 SPATA46Q5T0L3 261 aa8.24□□□□□ -1.09
TMEM39A-210ENST00000490099 ARL9Q6T311 187 aa8.24□□□□□ -1.09
TMEM39A-210ENST00000490099 RINLQ6ZS11 566 aa8.24□□□□□ -1.09
TMEM39A-210ENST00000490099 USP51Q70EK9 711 aa8.24□□□□□ -1.09
TMEM39A-210ENST00000490099 GLCCI1Q86VQ1 547 aa8.24□□□□□ -1.09
TMEM39A-210ENST00000490099 DEFB107AQ8IZN7 70 aa8.24□□□□□ -1.09
TMEM39A-210ENST00000490099 PLPP7Q8NBV4 271 aa8.24□□□□□ -1.09
TMEM39A-210ENST00000490099 OR51F2Q8NH61 342 aa8.24□□□□□ -1.09
TMEM39A-210ENST00000490099 ABHD4Q8TB40 342 aa8.24□□□□□ -1.09
TMEM39A-210ENST00000490099 SLC7A6OSQ96CW6 309 aaPredicted RBP8.24□□□□□ -1.09
TMEM39A-210ENST00000490099 RASD2Q96D21 266 aa8.24□□□□□ -1.09
TMEM39A-210ENST00000490099 ELMOD3Q96FG2 381 aa8.24□□□□□ -1.09
TMEM39A-210ENST00000490099 RSRC1Q96IZ7 334 aaKnown RBP8.24□□□□□ -1.09
TMEM39A-210ENST00000490099 ZNF570Q96NI8 536 aa8.24□□□□□ -1.09
TMEM39A-210ENST00000490099 DDOQ99489 341 aa8.24□□□□□ -1.09
TMEM39A-210ENST00000490099 NDEL1Q9GZM8 345 aa8.24□□□□□ -1.09
TMEM39A-210ENST00000490099 NUAK2Q9H093 628 aa8.24□□□□□ -1.09
TMEM39A-210ENST00000490099 SYT4Q9H2B2 425 aa8.24□□□□□ -1.09
TMEM39A-210ENST00000490099 IL1RAPQ9NPH3 570 aa8.24□□□□□ -1.09
TMEM39A-210ENST00000490099 HIF1ANQ9NWT6 349 aa8.24□□□□□ -1.09
TMEM39A-210ENST00000490099 TAS2R1Q9NYW7 299 aa8.24□□□□□ -1.09
TMEM39A-210ENST00000490099 ADA2Q9NZK5 511 aa8.24□□□□□ -1.09
TMEM39A-210ENST00000490099 COA3Q9Y2R0 106 aaPredicted RBP8.24□□□□□ -1.09
TMEM39A-210ENST00000490099 STARD10Q9Y365 291 aa8.24□□□□□ -1.09
TMEM39A-210ENST00000490099 WIPI2Q9Y4P8 454 aa8.24□□□□□ -1.09
TMEM39A-210ENST00000490099 IER3IP1Q9Y5U9 82 aa8.24□□□□□ -1.09
TMEM39A-210ENST00000490099 A0A0A6YYJ9 748 aa8.23□□□□□ -1.09
TMEM39A-210ENST00000490099 A0A1W2PPL8 197 aa8.23□□□□□ -1.09
TMEM39A-210ENST00000490099 PLSCR5A0PG75 271 aa8.23□□□□□ -1.09
TMEM39A-210ENST00000490099 UNC119BA6NIH7 251 aa8.23□□□□□ -1.09
TMEM39A-210ENST00000490099 CLDN25C9JDP6 229 aa8.23□□□□□ -1.09
TMEM39A-210ENST00000490099 SGCEO43556 437 aa8.23□□□□□ -1.09
TMEM39A-210ENST00000490099 SPRY3O43610 288 aa8.23□□□□□ -1.09
TMEM39A-210ENST00000490099 SLC16A7O60669 478 aa8.23□□□□□ -1.09
TMEM39A-210ENST00000490099 DIRAS1O95057 198 aa8.23□□□□□ -1.09
TMEM39A-210ENST00000490099 IGHV2-5P01817 119 aa8.23□□□□□ -1.09
TMEM39A-210ENST00000490099 ITGA2P17301 1181 aa8.23□□□□□ -1.09
TMEM39A-210ENST00000490099 FPR3P25089 353 aa8.23□□□□□ -1.09
TMEM39A-210ENST00000490099 GSSP48637 474 aa8.23□□□□□ -1.09
TMEM39A-210ENST00000490099 ARHGDIAP52565 204 aa8.23□□□□□ -1.09
TMEM39A-210ENST00000490099 GLO1Q04760 184 aa8.23□□□□□ -1.09
TMEM39A-210ENST00000490099 COX10Q12887 443 aa8.23□□□□□ -1.09
TMEM39A-210ENST00000490099 TSTQ16762 297 aaKnown RBP8.23□□□□□ -1.09
TMEM39A-210ENST00000490099 HFEQ30201 348 aa8.23□□□□□ -1.09
TMEM39A-210ENST00000490099 MTX3Q5HYI7 312 aa8.23□□□□□ -1.09
TMEM39A-210ENST00000490099 FGD3Q5JSP0 725 aa8.23□□□□□ -1.09
TMEM39A-210ENST00000490099 SAMD4BQ5PRF9 694 aaKnown RBP8.23□□□□□ -1.09
TMEM39A-210ENST00000490099 ACSM5Q6NUN0 579 aa8.23□□□□□ -1.09
TMEM39A-210ENST00000490099 C1orf94Q6P1W5 598 aa8.23□□□□□ -1.09
TMEM39A-210ENST00000490099 SMARCD3Q6STE5 483 aa8.23□□□□□ -1.09
TMEM39A-210ENST00000490099 FBXW12Q6X9E4 464 aa8.23□□□□□ -1.09
TMEM39A-210ENST00000490099 Q6ZR03 302 aa8.23□□□□□ -1.09
TMEM39A-210ENST00000490099 COLCA1Q6ZS62 124 aa8.23□□□□□ -1.09
TMEM39A-210ENST00000490099 ASRGL1Q7L266 308 aa8.23□□□□□ -1.09
TMEM39A-210ENST00000490099 ZBTB46Q86UZ6 589 aa8.23□□□□□ -1.09
TMEM39A-210ENST00000490099 OR6V1Q8N148 313 aa8.23□□□□□ -1.09
TMEM39A-210ENST00000490099 RNF148Q8N7C7 305 aa8.23□□□□□ -1.09
TMEM39A-210ENST00000490099 NPEPL1Q8NDH3 523 aa8.23□□□□□ -1.09
TMEM39A-210ENST00000490099 OR1F12Q8NHA8 337 aa8.23□□□□□ -1.09
TMEM39A-210ENST00000490099 DCLRE1CQ96SD1 692 aaKnown RBP8.23□□□□□ -1.09
TMEM39A-210ENST00000490099 CDRT15Q96T59 188 aa8.23□□□□□ -1.09
TMEM39A-210ENST00000490099 C19orf24Q9BVV8 132 aa8.23□□□□□ -1.09
TMEM39A-210ENST00000490099 EGLN1Q9GZT9 426 aa8.23□□□□□ -1.09
TMEM39A-210ENST00000490099 POFUT1Q9H488 388 aa8.23□□□□□ -1.09
TMEM39A-210ENST00000490099 ZNF665Q9H7R5 613 aa8.23□□□□□ -1.09
TMEM39A-210ENST00000490099 SAP30LQ9HAJ7 183 aa8.23□□□□□ -1.09
TMEM39A-210ENST00000490099 DECR2Q9NUI1 292 aa8.23□□□□□ -1.09
TMEM39A-210ENST00000490099 MAGEL2Q9UJ55 1249 aa8.23□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 58.4 ms