RNA–Protein interactions for RNA: ENST00000489053.1

HDAC6-232, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 539 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-232ENST00000489053 AQP11Q8NBQ7 271 aa7.81□□□□□ -1.16
HDAC6-232ENST00000489053 OR52E2Q8NGJ4 325 aa7.81□□□□□ -1.16
HDAC6-232ENST00000489053 OR1F12Q8NHA8 337 aa7.81□□□□□ -1.16
HDAC6-232ENST00000489053 KLF14Q8TD94 323 aaPredicted RBP7.81□□□□□ -1.16
HDAC6-232ENST00000489053 BCAS4Q8TDM0 211 aa7.81□□□□□ -1.16
HDAC6-232ENST00000489053 RAB1CQ92928 201 aa7.81□□□□□ -1.16
HDAC6-232ENST00000489053 MSI2Q96DH6 328 aaKnown RBP7.81□□□□□ -1.16
HDAC6-232ENST00000489053 NMNAT3Q96T66 252 aa7.81□□□□□ -1.16
HDAC6-232ENST00000489053 PITX2Q99697 317 aa7.81□□□□□ -1.16
HDAC6-232ENST00000489053 TEX12Q9BXU0 123 aa7.81□□□□□ -1.16
HDAC6-232ENST00000489053 HDHD2Q9H0R4 259 aa7.81□□□□□ -1.16
HDAC6-232ENST00000489053 MAGIXQ9H6Y5 334 aa7.81□□□□□ -1.16
HDAC6-232ENST00000489053 ZNF275Q9NSD4 429 aaPredicted RBP7.81□□□□□ -1.16
HDAC6-232ENST00000489053 ZDHHC8Q9ULC8 765 aa7.81□□□□□ -1.16
HDAC6-232ENST00000489053 CDH10Q9Y6N8 788 aa7.81□□□□□ -1.16
HDAC6-232ENST00000489053 STAB1Q9NY15 2570 aa7.81□□□□□ -1.16
HDAC6-232ENST00000489053 A0A096LNT2 108 aa7.8□□□□□ -1.16
HDAC6-232ENST00000489053 B4DSR2 109 aa7.8□□□□□ -1.16
HDAC6-232ENST00000489053 ARPC3O15145 178 aa7.8□□□□□ -1.16
HDAC6-232ENST00000489053 TFP02787 698 aa7.8□□□□□ -1.16
HDAC6-232ENST00000489053 FAM157CP0CG43 387 aa7.8□□□□□ -1.16
HDAC6-232ENST00000489053 RAP2AP10114 183 aa7.8□□□□□ -1.16
HDAC6-232ENST00000489053 ANPEPP15144 967 aa7.8□□□□□ -1.16
HDAC6-232ENST00000489053 HIST1H1CP16403 213 aaKnown RBP7.8□□□□□ -1.16
HDAC6-232ENST00000489053 ZNF26P17031 533 aaPredicted RBP7.8□□□□□ -1.16
HDAC6-232ENST00000489053 TNFRSF1AP19438 455 aa7.8□□□□□ -1.16
HDAC6-232ENST00000489053 MPV17P39210 176 aa7.8□□□□□ -1.16
HDAC6-232ENST00000489053 WNT5AP41221 380 aa7.8□□□□□ -1.16
HDAC6-232ENST00000489053 CDKN2AP42771 156 aaKnown RBP7.8□□□□□ -1.16
HDAC6-232ENST00000489053 TNFAIP6P98066 277 aaPredicted RBP7.8□□□□□ -1.16
HDAC6-232ENST00000489053 MVKQ03426 396 aa7.8□□□□□ -1.16
HDAC6-232ENST00000489053 KHDRBS1Q07666 443 aaKnown RBP eCLIP7.8□□□□□ -1.16
HDAC6-232ENST00000489053 ECH1Q13011 328 aa7.8□□□□□ -1.16
HDAC6-232ENST00000489053 MALLQ13021 153 aa7.8□□□□□ -1.16
HDAC6-232ENST00000489053 SCGB2A2Q13296 93 aa7.8□□□□□ -1.16
HDAC6-232ENST00000489053 FHL1Q13642 323 aa7.8□□□□□ -1.16
HDAC6-232ENST00000489053 TAF13Q15543 124 aa7.8□□□□□ -1.16
HDAC6-232ENST00000489053 ELFN2Q5R3F8 820 aa7.8□□□□□ -1.16
HDAC6-232ENST00000489053 OR2T5Q6IEZ7 315 aa7.8□□□□□ -1.16
HDAC6-232ENST00000489053 PGBD2Q6P3X8 592 aa7.8□□□□□ -1.16
HDAC6-232ENST00000489053 ZNF620Q6ZNG0 422 aa7.8□□□□□ -1.16
HDAC6-232ENST00000489053 PTCHD4Q6ZW05 846 aa7.8□□□□□ -1.16
HDAC6-232ENST00000489053 USP51Q70EK9 711 aa7.8□□□□□ -1.16
HDAC6-232ENST00000489053 VASH1Q7L8A9 365 aaPredicted RBP7.8□□□□□ -1.16
HDAC6-232ENST00000489053 TRPM8Q7Z2W7 1104 aa7.8□□□□□ -1.16
HDAC6-232ENST00000489053 SPATA24Q86W54 205 aa7.8□□□□□ -1.16
HDAC6-232ENST00000489053 SDR9C7Q8NEX9 313 aa7.8□□□□□ -1.16
HDAC6-232ENST00000489053 OR2T33Q8NG76 320 aa7.8□□□□□ -1.16
HDAC6-232ENST00000489053 OR9Q2Q8NGE9 314 aa7.8□□□□□ -1.16
HDAC6-232ENST00000489053 OR4C15Q8NGM1 316 aa7.8□□□□□ -1.16
HDAC6-232ENST00000489053 OR2T4Q8NH00 348 aa7.8□□□□□ -1.16
HDAC6-232ENST00000489053 OR2T29Q8NH02 315 aa7.8□□□□□ -1.16
HDAC6-232ENST00000489053 TEX47Q8TBZ9 253 aa7.8□□□□□ -1.16
HDAC6-232ENST00000489053 CCL17Q92583 94 aa7.8□□□□□ -1.16
HDAC6-232ENST00000489053 OTULINQ96BN8 352 aa7.8□□□□□ -1.16
HDAC6-232ENST00000489053 RAB39BQ96DA2 213 aa7.8□□□□□ -1.16
HDAC6-232ENST00000489053 ASB9Q96DX5 294 aa7.8□□□□□ -1.16
HDAC6-232ENST00000489053 MARS2Q96GW9 593 aaKnown RBP7.8□□□□□ -1.16
HDAC6-232ENST00000489053 DCLRE1CQ96SD1 692 aaKnown RBP7.8□□□□□ -1.16
HDAC6-232ENST00000489053 THTPAQ9BU02 230 aa7.8□□□□□ -1.16
HDAC6-232ENST00000489053 HCAR1Q9BXC0 346 aa7.8□□□□□ -1.16
HDAC6-232ENST00000489053 RACGAP1Q9H0H5 632 aa7.8□□□□□ -1.16
HDAC6-232ENST00000489053 EGLN3Q9H6Z9 239 aa7.8□□□□□ -1.16
HDAC6-232ENST00000489053 ZNF556Q9HAH1 456 aa7.8□□□□□ -1.16
HDAC6-232ENST00000489053 TBCCD1Q9NVR7 557 aa7.8□□□□□ -1.16
HDAC6-232ENST00000489053 TMEM160Q9NX00 188 aa7.8□□□□□ -1.16
HDAC6-232ENST00000489053 NKIRAS2Q9NYR9 191 aa7.8□□□□□ -1.16
HDAC6-232ENST00000489053 ATPIF1Q9UII2 106 aa7.8□□□□□ -1.16
HDAC6-232ENST00000489053 BAIAP2Q9UQB8 552 aa7.8□□□□□ -1.16
HDAC6-232ENST00000489053 LYVE1Q9Y5Y7 322 aa7.8□□□□□ -1.16
HDAC6-232ENST00000489053 U3KQV3 271 aa7.8□□□□□ -1.16
HDAC6-232ENST00000489053 DHRS12A0PJE2 317 aa7.79□□□□□ -1.16
HDAC6-232ENST00000489053 H3BN98 237 aa7.79□□□□□ -1.16
HDAC6-232ENST00000489053 J3QW42 95 aa7.79□□□□□ -1.16
HDAC6-232ENST00000489053 RER1O15258 196 aa7.79□□□□□ -1.16
HDAC6-232ENST00000489053 NCR1O76036 304 aa7.79□□□□□ -1.16
HDAC6-232ENST00000489053 MPZL1O95297 269 aa7.79□□□□□ -1.16
HDAC6-232ENST00000489053 CST1P01037 141 aa7.79□□□□□ -1.16
HDAC6-232ENST00000489053 NGFP01138 241 aa7.79□□□□□ -1.16
HDAC6-232ENST00000489053 IGFBP1P08833 259 aaPredicted RBP7.79□□□□□ -1.16
HDAC6-232ENST00000489053 TACSTD2P09758 323 aa7.79□□□□□ -1.16
HDAC6-232ENST00000489053 SELEP16581 610 aa7.79□□□□□ -1.16
HDAC6-232ENST00000489053 ZNF3P17036 446 aa7.79□□□□□ -1.16
HDAC6-232ENST00000489053 PAICSP22234 425 aaKnown RBP7.79□□□□□ -1.16
HDAC6-232ENST00000489053 COL8A2P25067 703 aa7.79□□□□□ -1.16
HDAC6-232ENST00000489053 CRYBB2P43320 205 aa7.79□□□□□ -1.16
HDAC6-232ENST00000489053 SLC6A9P48067 706 aa7.79□□□□□ -1.16
HDAC6-232ENST00000489053 GSSP48637 474 aa7.79□□□□□ -1.16
HDAC6-232ENST00000489053 RIN1Q13671 783 aa7.79□□□□□ -1.16
HDAC6-232ENST00000489053 FLOT2Q14254 428 aa7.79□□□□□ -1.16
HDAC6-232ENST00000489053 GK3PQ14409 553 aa7.79□□□□□ -1.16
HDAC6-232ENST00000489053 TRIP10Q15642 601 aa7.79□□□□□ -1.16
HDAC6-232ENST00000489053 MEP1BQ16820 701 aa7.79□□□□□ -1.16
HDAC6-232ENST00000489053 FAM120AOSQ5T036 256 aa7.79□□□□□ -1.16
HDAC6-232ENST00000489053 AVPI1Q5T686 147 aa7.79□□□□□ -1.16
HDAC6-232ENST00000489053 OTPQ5XKR4 325 aa7.79□□□□□ -1.16
HDAC6-232ENST00000489053 LINC00346Q8IVM7 164 aa7.79□□□□□ -1.16
HDAC6-232ENST00000489053 TEX29Q8N6K0 151 aa7.79□□□□□ -1.16
HDAC6-232ENST00000489053 ATG16L2Q8NAA4 619 aa7.79□□□□□ -1.16
HDAC6-232ENST00000489053 OR2Z1Q8NG97 314 aa7.79□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms