RNA–Protein interactions for RNA: ENST00000488908.1

CCDC93-209, Transcript of coiled-coil domain containing 93, humanhuman

TSL 5

Gene CCDC93, Length 268 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC93-209ENST00000488908 YWHAGP61981 247 aaKnown RBP eCLIP0.6□□□□□ -2.31
CCDC93-209ENST00000488908 MXD1Q05195 221 aa0.6□□□□□ -2.31
CCDC93-209ENST00000488908 PDK3Q15120 406 aa0.6□□□□□ -2.31
CCDC93-209ENST00000488908 TEX30Q5JUR7 227 aa0.6□□□□□ -2.31
CCDC93-209ENST00000488908 GUSBP11Q6P575 273 aa0.6□□□□□ -2.31
CCDC93-209ENST00000488908 SPNS3Q6ZMD2 512 aa0.6□□□□□ -2.31
CCDC93-209ENST00000488908 H2BFWTQ7Z2G1 175 aa0.6□□□□□ -2.31
CCDC93-209ENST00000488908 EFL1Q7Z2Z2 1120 aaKnown RBP0.6□□□□□ -2.31
CCDC93-209ENST00000488908 DHDDSQ86SQ9 333 aa0.6□□□□□ -2.31
CCDC93-209ENST00000488908 TGIF2LXQ8IUE1 241 aa0.6□□□□□ -2.31
CCDC93-209ENST00000488908 PSTKQ8IV42 348 aaKnown RBP0.6□□□□□ -2.31
CCDC93-209ENST00000488908 SGPP2Q8IWX5 399 aa0.6□□□□□ -2.31
CCDC93-209ENST00000488908 ZNF101Q8IZC7 436 aa0.6□□□□□ -2.31
CCDC93-209ENST00000488908 SCFD1Q8WVM8 642 aa0.6□□□□□ -2.31
CCDC93-209ENST00000488908 WDR34Q96EX3 536 aa0.6□□□□□ -2.31
CCDC93-209ENST00000488908 ZBED3Q96IU2 234 aaPredicted RBP0.6□□□□□ -2.31
CCDC93-209ENST00000488908 PKMYT1Q99640 499 aa0.6□□□□□ -2.31
CCDC93-209ENST00000488908 RAB33BQ9H082 229 aa0.6□□□□□ -2.31
CCDC93-209ENST00000488908 DHX35Q9H5Z1 703 aaKnown RBP0.6□□□□□ -2.31
CCDC93-209ENST00000488908 RMND5AQ9H871 391 aa0.6□□□□□ -2.31
CCDC93-209ENST00000488908 C8orf17Q9NRJ1 99 aa0.6□□□□□ -2.31
CCDC93-209ENST00000488908 ING4Q9UNL4 249 aa0.6□□□□□ -2.31
CCDC93-209ENST00000488908 GOLT1BQ9Y3E0 138 aa0.6□□□□□ -2.31
CCDC93-209ENST00000488908 COL5A3P25940 1745 aaPredicted RBP0.6□□□□□ -2.31
CCDC93-209ENST00000488908 THADAQ6YHU6 1953 aa0.59□□□□□ -2.31
CCDC93-209ENST00000488908 SVILO95425 2214 aa0.59□□□□□ -2.31
CCDC93-209ENST00000488908 PRRC2BQ5JSZ5 2229 aaKnown RBP0.59□□□□□ -2.31
CCDC93-209ENST00000488908 ZNF816-ZNF321PA0A0X1KG74 233 aa0.59□□□□□ -2.31
CCDC93-209ENST00000488908 CLRN2A0PK11 232 aa0.59□□□□□ -2.31
CCDC93-209ENST00000488908 GOLGA6L4A6NEF3 574 aa0.59□□□□□ -2.31
CCDC93-209ENST00000488908 FAM47DPA6NHR8 397 aa0.59□□□□□ -2.31
CCDC93-209ENST00000488908 C4orf51C9J302 202 aa0.59□□□□□ -2.31
CCDC93-209ENST00000488908 HAS3O00219 553 aa0.59□□□□□ -2.31
CCDC93-209ENST00000488908 MFNGO00587 321 aa0.59□□□□□ -2.31
CCDC93-209ENST00000488908 MAGEB3O15480 346 aa0.59□□□□□ -2.31
CCDC93-209ENST00000488908 PLIN3O60664 434 aa0.59□□□□□ -2.31
CCDC93-209ENST00000488908 NOL3O60936 208 aaKnown RBP0.59□□□□□ -2.31
CCDC93-209ENST00000488908 IGLV2-8P01709 118 aa0.59□□□□□ -2.31
CCDC93-209ENST00000488908 FGGP02679 453 aa0.59□□□□□ -2.31
CCDC93-209ENST00000488908 IGLV7-43P04211 117 aa0.59□□□□□ -2.31
CCDC93-209ENST00000488908 CTSLP07711 333 aa0.59□□□□□ -2.31
CCDC93-209ENST00000488908 PFN1P07737 140 aaKnown RBP0.59□□□□□ -2.31
CCDC93-209ENST00000488908 CDKN2DP55273 166 aa0.59□□□□□ -2.31
CCDC93-209ENST00000488908 PPP1CBP62140 327 aa0.59□□□□□ -2.31
CCDC93-209ENST00000488908 ACTG2P63267 376 aa0.59□□□□□ -2.31
CCDC93-209ENST00000488908 MRPS22P82650 360 aaKnown RBP0.59□□□□□ -2.31
CCDC93-209ENST00000488908 IMMTQ16891 758 aaKnown RBP0.59□□□□□ -2.31
CCDC93-209ENST00000488908 SP6Q3SY56 376 aa0.59□□□□□ -2.31
CCDC93-209ENST00000488908 MED27Q6P2C8 311 aa0.59□□□□□ -2.31
CCDC93-209ENST00000488908 PRSS54Q6PEW0 395 aa0.59□□□□□ -2.31
CCDC93-209ENST00000488908 COX18Q8N8Q8 333 aa0.59□□□□□ -2.31
CCDC93-209ENST00000488908 OR2A1Q8NGT9 310 aa0.59□□□□□ -2.31
CCDC93-209ENST00000488908 HGDQ93099 445 aa0.59□□□□□ -2.31
CCDC93-209ENST00000488908 FMO2Q99518 471 aa0.59□□□□□ -2.31
CCDC93-209ENST00000488908 RBBP8Q99708 897 aa0.59□□□□□ -2.31
CCDC93-209ENST00000488908 SEC22CQ9BRL7 303 aa0.59□□□□□ -2.31
CCDC93-209ENST00000488908 TMEM43Q9BTV4 400 aa0.59□□□□□ -2.31
CCDC93-209ENST00000488908 EDA2RQ9HAV5 297 aa0.59□□□□□ -2.31
CCDC93-209ENST00000488908 CSNK1G1Q9HCP0 422 aa0.59□□□□□ -2.31
CCDC93-209ENST00000488908 NT5MQ9NPB1 228 aa0.59□□□□□ -2.31
CCDC93-209ENST00000488908 HPF1Q9NWY4 346 aa0.59□□□□□ -2.31
CCDC93-209ENST00000488908 VANGL2Q9ULK5 521 aa0.59□□□□□ -2.31
CCDC93-209ENST00000488908 SNX6Q9UNH7 406 aa0.59□□□□□ -2.31
CCDC93-209ENST00000488908 YARS2Q9Y2Z4 477 aaKnown RBP0.59□□□□□ -2.31
CCDC93-209ENST00000488908 ZBED9Q6R2W3 1325 aa0.59□□□□□ -2.32
CCDC93-209ENST00000488908 PALLDQ8WX93 1383 aa0.58□□□□□ -2.32
CCDC93-209ENST00000488908 NACADO15069 1562 aa0.58□□□□□ -2.32
CCDC93-209ENST00000488908 BAHCC1Q9P281 2608 aa0.58□□□□□ -2.32
CCDC93-209ENST00000488908 IGHV3-72A0A0B4J1Y9 119 aa0.58□□□□□ -2.32
CCDC93-209ENST00000488908 A0A1B0GUH1 482 aa0.58□□□□□ -2.32
CCDC93-209ENST00000488908 ARHGEF35A5YM69 484 aa0.58□□□□□ -2.32
CCDC93-209ENST00000488908 OR5H1A6NKK0 313 aa0.58□□□□□ -2.32
CCDC93-209ENST00000488908 SNTNA6NMZ2 147 aa0.58□□□□□ -2.32
CCDC93-209ENST00000488908 CEACAM18A8MTB9 384 aa0.58□□□□□ -2.32
CCDC93-209ENST00000488908 GPR89AB7ZAQ6 455 aa0.58□□□□□ -2.32
CCDC93-209ENST00000488908 DNALI1O14645 258 aaPredicted RBP0.58□□□□□ -2.32
CCDC93-209ENST00000488908 PPP1R2P9O14990 202 aa0.58□□□□□ -2.32
CCDC93-209ENST00000488908 TIMM8AO60220 97 aaPredicted RBP0.58□□□□□ -2.32
CCDC93-209ENST00000488908 EIF4E2O60573 245 aaKnown RBP0.58□□□□□ -2.32
CCDC93-209ENST00000488908 PEX11AO75192 247 aa0.58□□□□□ -2.32
CCDC93-209ENST00000488908 GLSO94925 669 aaPredicted RBP0.58□□□□□ -2.32
CCDC93-209ENST00000488908 TMEM50AO95807 157 aa0.58□□□□□ -2.32
CCDC93-209ENST00000488908 PABPC4LP0CB38 370 aaKnown RBP0.58□□□□□ -2.32
CCDC93-209ENST00000488908 GPR89BP0CG08 455 aa0.58□□□□□ -2.32
CCDC93-209ENST00000488908 INAFM2P0DMQ5 153 aa0.58□□□□□ -2.32
CCDC93-209ENST00000488908 HSPA5P11021 654 aaKnown RBP0.58□□□□□ -2.32
CCDC93-209ENST00000488908 ERGP11308 486 aa0.58□□□□□ -2.32
CCDC93-209ENST00000488908 HRES1P13985 223 aa0.58□□□□□ -2.32
CCDC93-209ENST00000488908 NCK1P16333 377 aa0.58□□□□□ -2.32
CCDC93-209ENST00000488908 TCP1P17987 556 aaKnown RBP0.58□□□□□ -2.32
CCDC93-209ENST00000488908 CCNG1P51959 295 aa0.58□□□□□ -2.32
CCDC93-209ENST00000488908 KCNJ2P63252 427 aa0.58□□□□□ -2.32
CCDC93-209ENST00000488908 PPIDQ08752 370 aaKnown RBP0.58□□□□□ -2.32
CCDC93-209ENST00000488908 ELP6Q0PNE2 266 aa0.58□□□□□ -2.32
CCDC93-209ENST00000488908 PPIL2Q13356 520 aa0.58□□□□□ -2.32
CCDC93-209ENST00000488908 FAM53BQ14153 422 aa0.58□□□□□ -2.32
CCDC93-209ENST00000488908 CFAP157Q5JU67 520 aa0.58□□□□□ -2.32
CCDC93-209ENST00000488908 ATAD3BQ5T9A4 648 aa0.58□□□□□ -2.32
CCDC93-209ENST00000488908 ANKRD26P1Q6NSI1 321 aa0.58□□□□□ -2.32
CCDC93-209ENST00000488908 APOBEC3HQ6NTF7 200 aaKnown RBP0.58□□□□□ -2.32
Retrieved 100 of 20,778 RNA–protein pairs in 62.8 ms