RNA–Protein interactions for RNA: ENST00000487038.5

PDPN-205, Transcript of podoplanin, humanhuman

TSL 2 BASIC

Gene PDPN, Length 607 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-205ENST00000487038 NFKBIDQ8NI38 313 aa6.33□□□□□ -1.4
PDPN-205ENST00000487038 C10orf82Q8WW14 230 aa6.33□□□□□ -1.4
PDPN-205ENST00000487038 NSMAFQ92636 917 aa6.33□□□□□ -1.4
PDPN-205ENST00000487038 PTP4A1Q93096 173 aa6.33□□□□□ -1.4
PDPN-205ENST00000487038 VPS33AQ96AX1 596 aa6.33□□□□□ -1.4
PDPN-205ENST00000487038 HAVCR1Q96D42 359 aa6.33□□□□□ -1.4
PDPN-205ENST00000487038 CMBLQ96DG6 245 aa6.33□□□□□ -1.4
PDPN-205ENST00000487038 OR4F4Q96R69 305 aa6.33□□□□□ -1.4
PDPN-205ENST00000487038 WNT5BQ9H1J7 359 aa6.33□□□□□ -1.4
PDPN-205ENST00000487038 CENPHQ9H3R5 247 aa6.33□□□□□ -1.4
PDPN-205ENST00000487038 LOC100653049A0A140TA62 436 aa6.32□□□□□ -1.4
PDPN-205ENST00000487038 A0A1W2PPL8 197 aa6.32□□□□□ -1.4
PDPN-205ENST00000487038 TLDC2A0PJX2 215 aa6.32□□□□□ -1.4
PDPN-205ENST00000487038 CPSF4LA6NMK7 179 aaKnown RBP6.32□□□□□ -1.4
PDPN-205ENST00000487038 CLIC1O00299 241 aa6.32□□□□□ -1.4
PDPN-205ENST00000487038 ITM2AO43736 263 aa6.32□□□□□ -1.4
PDPN-205ENST00000487038 DOK2O60496 412 aa6.32□□□□□ -1.4
PDPN-205ENST00000487038 SLC22A3O75751 556 aa6.32□□□□□ -1.4
PDPN-205ENST00000487038 KRT34O76011 436 aa6.32□□□□□ -1.4
PDPN-205ENST00000487038 PAHP00439 452 aa6.32□□□□□ -1.4
PDPN-205ENST00000487038 F13BP05160 661 aa6.32□□□□□ -1.4
PDPN-205ENST00000487038 RAC2P15153 192 aa6.32□□□□□ -1.4
PDPN-205ENST00000487038 CD33P20138 364 aa6.32□□□□□ -1.4
PDPN-205ENST00000487038 MSR1P21757 451 aa6.32□□□□□ -1.4
PDPN-205ENST00000487038 PPIBP23284 216 aaKnown RBP6.32□□□□□ -1.4
PDPN-205ENST00000487038 EEF1B2P24534 225 aaKnown RBP6.32□□□□□ -1.4
PDPN-205ENST00000487038 LAP3P28838 519 aa6.32□□□□□ -1.4
PDPN-205ENST00000487038 PSMB10P40306 273 aa6.32□□□□□ -1.4
PDPN-205ENST00000487038 EFNB2P52799 333 aa6.32□□□□□ -1.4
PDPN-205ENST00000487038 CDK6Q00534 326 aa6.32□□□□□ -1.4
PDPN-205ENST00000487038 GUCA2AQ02747 115 aa6.32□□□□□ -1.4
PDPN-205ENST00000487038 EMX1Q04741 257 aaPredicted RBP6.32□□□□□ -1.4
PDPN-205ENST00000487038 FMODQ06828 376 aa6.32□□□□□ -1.4
PDPN-205ENST00000487038 RPL18Q07020 188 aaKnown RBP6.32□□□□□ -1.4
PDPN-205ENST00000487038 C11orf91Q3C1V1 193 aa6.32□□□□□ -1.4
PDPN-205ENST00000487038 GTDC1Q4AE62 458 aa6.32□□□□□ -1.4
PDPN-205ENST00000487038 RUNDC3AQ59EK9 446 aa6.32□□□□□ -1.4
PDPN-205ENST00000487038 GCNT6Q5T4J0 391 aa6.32□□□□□ -1.4
PDPN-205ENST00000487038 INTS11Q5TA45 600 aaKnown RBP6.32□□□□□ -1.4
PDPN-205ENST00000487038 FOXB2Q5VYV0 432 aa6.32□□□□□ -1.4
PDPN-205ENST00000487038 LYPD2Q6UXB3 125 aa6.32□□□□□ -1.4
PDPN-205ENST00000487038 LINC00114Q6XXX2 140 aa6.32□□□□□ -1.4
PDPN-205ENST00000487038 ZNF841Q6ZN19 808 aa6.32□□□□□ -1.4
PDPN-205ENST00000487038 ARMC8Q8IUR7 673 aa6.32□□□□□ -1.4
PDPN-205ENST00000487038 OR5AS1Q8N127 324 aa6.32□□□□□ -1.4
PDPN-205ENST00000487038 KLHDC1Q8N7A1 406 aa6.32□□□□□ -1.4
PDPN-205ENST00000487038 CLDN22Q8N7P3 220 aa6.32□□□□□ -1.4
PDPN-205ENST00000487038 C11orf44Q8N8P7 122 aa6.32□□□□□ -1.4
PDPN-205ENST00000487038 OR8G5Q8NG78 346 aa6.32□□□□□ -1.4
PDPN-205ENST00000487038 OR5L1Q8NGL2 311 aa6.32□□□□□ -1.4
PDPN-205ENST00000487038 CFHR4Q92496 578 aa6.32□□□□□ -1.4
PDPN-205ENST00000487038 ERGIC1Q969X5 290 aa6.32□□□□□ -1.4
PDPN-205ENST00000487038 MPP4Q96JB8 637 aa6.32□□□□□ -1.4
PDPN-205ENST00000487038 CLPTM1LQ96KA5 538 aa6.32□□□□□ -1.4
PDPN-205ENST00000487038 ZNF583Q96ND8 569 aa6.32□□□□□ -1.4
PDPN-205ENST00000487038 ZNF582Q96NG8 517 aaPredicted RBP6.32□□□□□ -1.4
PDPN-205ENST00000487038 RBP7Q96R05 134 aa6.32□□□□□ -1.4
PDPN-205ENST00000487038 MCHR1Q99705 422 aa6.32□□□□□ -1.4
PDPN-205ENST00000487038 SIRPDQ9H106 197 aa6.32□□□□□ -1.4
PDPN-205ENST00000487038 PCDHAC1Q9H158 963 aa6.32□□□□□ -1.4
PDPN-205ENST00000487038 PPA2Q9H2U2 334 aa6.32□□□□□ -1.4
PDPN-205ENST00000487038 TOR3AQ9H497 397 aa6.32□□□□□ -1.4
PDPN-205ENST00000487038 RANBP3Q9H6Z4 567 aaPredicted RBP6.32□□□□□ -1.4
PDPN-205ENST00000487038 RAB18Q9NP72 206 aa6.32□□□□□ -1.4
PDPN-205ENST00000487038 INIPQ9NRY2 104 aa6.32□□□□□ -1.4
PDPN-205ENST00000487038 ANGPT4Q9Y264 503 aa6.32□□□□□ -1.4
PDPN-205ENST00000487038 UGT2A1Q9Y4X1 527 aa6.32□□□□□ -1.4
PDPN-205ENST00000487038 NPIPB13A6NJU9 1138 aa6.31□□□□□ -1.4
PDPN-205ENST00000487038 TRPC5OSA6NMA1 111 aa6.31□□□□□ -1.4
PDPN-205ENST00000487038 NPIPB4C9JG80 1138 aa6.31□□□□□ -1.4
PDPN-205ENST00000487038 E9PQ18 207 aa6.31□□□□□ -1.4
PDPN-205ENST00000487038 NDUFA2O43678 99 aa6.31□□□□□ -1.4
PDPN-205ENST00000487038 TPST1O60507 370 aa6.31□□□□□ -1.4
PDPN-205ENST00000487038 FBXO24O75426 580 aa6.31□□□□□ -1.4
PDPN-205ENST00000487038 ECDO95905 644 aaPredicted RBP6.31□□□□□ -1.4
PDPN-205ENST00000487038 SLC6A2P23975 617 aa6.31□□□□□ -1.4
PDPN-205ENST00000487038 GATA4P43694 442 aa6.31□□□□□ -1.4
PDPN-205ENST00000487038 SLC1A6P48664 564 aa6.31□□□□□ -1.4
PDPN-205ENST00000487038 RGS6P49758 472 aa6.31□□□□□ -1.4
PDPN-205ENST00000487038 UGT2B15P54855 530 aa6.31□□□□□ -1.4
PDPN-205ENST00000487038 COX10Q12887 443 aa6.31□□□□□ -1.4
PDPN-205ENST00000487038 DCTN2Q13561 401 aaKnown RBP6.31□□□□□ -1.4
PDPN-205ENST00000487038 SCARB2Q14108 478 aa6.31□□□□□ -1.4
PDPN-205ENST00000487038 DOC2BQ14184 412 aa6.31□□□□□ -1.4
PDPN-205ENST00000487038 NSUN5P1Q3KNT7 163 aa6.31□□□□□ -1.4
PDPN-205ENST00000487038 KLHL22Q53GT1 634 aa6.31□□□□□ -1.4
PDPN-205ENST00000487038 DEFB121Q5J5C9 76 aa6.31□□□□□ -1.4
PDPN-205ENST00000487038 ENTPD8Q5MY95 495 aa6.31□□□□□ -1.4
PDPN-205ENST00000487038 C1orf94Q6P1W5 598 aa6.31□□□□□ -1.4
PDPN-205ENST00000487038 VMO1Q7Z5L0 202 aa6.31□□□□□ -1.4
PDPN-205ENST00000487038 IGFN1Q86VF2 1251 aa6.31□□□□□ -1.4
PDPN-205ENST00000487038 COMTD1Q86VU5 262 aa6.31□□□□□ -1.4
PDPN-205ENST00000487038 SLC30A8Q8IWU4 369 aa6.31□□□□□ -1.4
PDPN-205ENST00000487038 PDZD9Q8IXQ8 264 aa6.31□□□□□ -1.4
PDPN-205ENST00000487038 CMTM4Q8IZR5 234 aa6.31□□□□□ -1.4
PDPN-205ENST00000487038 CELF2-AS1Q8N7Q2 184 aa6.31□□□□□ -1.4
PDPN-205ENST00000487038 ADAMTS16Q8TE57 1224 aa6.31□□□□□ -1.4
PDPN-205ENST00000487038 RASD2Q96D21 266 aa6.31□□□□□ -1.4
PDPN-205ENST00000487038 R3HDM4Q96D70 268 aa6.31□□□□□ -1.4
PDPN-205ENST00000487038 PKNOX2Q96KN3 472 aa6.31□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms