RNA–Protein interactions for RNA: ENST00000483065.1

R3HDM1-216, Transcript of R3H domain containing 1, humanhuman

TSL 3

Gene R3HDM1, Length 577 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-216ENST00000483065 ERVS71-1P61550 626 aa4.25□□□□□ -1.73
R3HDM1-216ENST00000483065 SRSF6Q13247 344 aaKnown RBP4.25□□□□□ -1.73
R3HDM1-216ENST00000483065 SLC39A6Q13433 755 aa4.25□□□□□ -1.73
R3HDM1-216ENST00000483065 KIAA0141Q14154 515 aaPredicted RBP4.25□□□□□ -1.73
R3HDM1-216ENST00000483065 NFATC4Q14934 902 aa4.25□□□□□ -1.73
R3HDM1-216ENST00000483065 PTGES3Q15185 160 aaKnown RBP4.25□□□□□ -1.73
R3HDM1-216ENST00000483065 TRIP13Q15645 432 aaPredicted RBP4.25□□□□□ -1.73
R3HDM1-216ENST00000483065 CNPY1Q3B7I2 92 aa4.25□□□□□ -1.73
R3HDM1-216ENST00000483065 YIF1BQ5BJH7 314 aa4.25□□□□□ -1.73
R3HDM1-216ENST00000483065 DUX4L9Q6RFH8 374 aaPredicted RBP4.25□□□□□ -1.73
R3HDM1-216ENST00000483065 FAM131AQ6UXB0 335 aa4.25□□□□□ -1.73
R3HDM1-216ENST00000483065 TMED4Q7Z7H5 227 aa4.25□□□□□ -1.73
R3HDM1-216ENST00000483065 RAB42Q8N4Z0 105 aa4.25□□□□□ -1.73
R3HDM1-216ENST00000483065 LRRC52Q8N7C0 313 aa4.25□□□□□ -1.73
R3HDM1-216ENST00000483065 ZNF557Q8N988 423 aaPredicted RBP4.25□□□□□ -1.73
R3HDM1-216ENST00000483065 OR4K2Q8NGD2 314 aa4.25□□□□□ -1.73
R3HDM1-216ENST00000483065 DTD1Q8TEA8 209 aa4.25□□□□□ -1.73
R3HDM1-216ENST00000483065 CASTOR1Q8WTX7 329 aa4.25□□□□□ -1.73
R3HDM1-216ENST00000483065 WDR41Q9HAD4 459 aa4.25□□□□□ -1.73
R3HDM1-216ENST00000483065 ABCB9Q9NP78 766 aa4.25□□□□□ -1.73
R3HDM1-216ENST00000483065 TMEM181Q9P2C4 612 aa4.25□□□□□ -1.73
R3HDM1-216ENST00000483065 DUX4Q9UBX2 424 aa4.25□□□□□ -1.73
R3HDM1-216ENST00000483065 SLC2A6Q9UGQ3 507 aa4.25□□□□□ -1.73
R3HDM1-216ENST00000483065 SNX10Q9Y5X0 201 aa4.25□□□□□ -1.73
R3HDM1-216ENST00000483065 ARID2Q68CP9 1835 aa4.25□□□□□ -1.73
R3HDM1-216ENST00000483065 A0A0B4J2A0 478 aa4.24□□□□□ -1.73
R3HDM1-216ENST00000483065 GNG14A0A1W2PPG7 69 aa4.24□□□□□ -1.73
R3HDM1-216ENST00000483065 VSTM2BA6NLU5 285 aa4.24□□□□□ -1.73
R3HDM1-216ENST00000483065 SMKR1H3BMG3 65 aa4.24□□□□□ -1.73
R3HDM1-216ENST00000483065 H3BNX3 289 aa4.24□□□□□ -1.73
R3HDM1-216ENST00000483065 ADAM10O14672 748 aa4.24□□□□□ -1.73
R3HDM1-216ENST00000483065 ZNF749O43361 778 aa4.24□□□□□ -1.73
R3HDM1-216ENST00000483065 ERI3O43414 337 aaKnown RBP4.24□□□□□ -1.73
R3HDM1-216ENST00000483065 FRAT2O75474 233 aaPredicted RBP4.24□□□□□ -1.73
R3HDM1-216ENST00000483065 AQP8O94778 261 aa4.24□□□□□ -1.73
R3HDM1-216ENST00000483065 LIMS3P0CW19 117 aa4.24□□□□□ -1.73
R3HDM1-216ENST00000483065 LIMS4P0CW20 117 aa4.24□□□□□ -1.73
R3HDM1-216ENST00000483065 PVRP15151 417 aa4.24□□□□□ -1.73
R3HDM1-216ENST00000483065 ZNF250P15622 560 aa4.24□□□□□ -1.73
R3HDM1-216ENST00000483065 IGFBP5P24593 272 aa4.24□□□□□ -1.73
R3HDM1-216ENST00000483065 CCNE1P24864 410 aa4.24□□□□□ -1.73
R3HDM1-216ENST00000483065 PAFAH1B2P68402 229 aa4.24□□□□□ -1.73
R3HDM1-216ENST00000483065 RPL18AQ02543 176 aaKnown RBP4.24□□□□□ -1.73
R3HDM1-216ENST00000483065 TGFBR3Q03167 851 aa4.24□□□□□ -1.73
R3HDM1-216ENST00000483065 CD164Q04900 197 aa4.24□□□□□ -1.73
R3HDM1-216ENST00000483065 AESQ08117 197 aa4.24□□□□□ -1.73
R3HDM1-216ENST00000483065 CDC20Q12834 499 aa4.24□□□□□ -1.73
R3HDM1-216ENST00000483065 MLLT11Q13015 90 aaPredicted RBP4.24□□□□□ -1.73
R3HDM1-216ENST00000483065 DYNC1I2Q13409 638 aaKnown RBP4.24□□□□□ -1.73
R3HDM1-216ENST00000483065 CLINT1Q14677 625 aa4.24□□□□□ -1.73
R3HDM1-216ENST00000483065 TRAM1Q15629 374 aa4.24□□□□□ -1.73
R3HDM1-216ENST00000483065 CLEC12BQ2HXU8 276 aa4.24□□□□□ -1.73
R3HDM1-216ENST00000483065 TECRLQ5HYJ1 363 aa4.24□□□□□ -1.73
R3HDM1-216ENST00000483065 MS4A13Q5J8X5 152 aa4.24□□□□□ -1.73
R3HDM1-216ENST00000483065 FAM120AOSQ5T036 256 aa4.24□□□□□ -1.73
R3HDM1-216ENST00000483065 METTL21CQ5VZV1 264 aa4.24□□□□□ -1.73
R3HDM1-216ENST00000483065 LRRN1Q6UXK5 716 aa4.24□□□□□ -1.73
R3HDM1-216ENST00000483065 Q6ZN92 141 aa4.24□□□□□ -1.73
R3HDM1-216ENST00000483065 VRK3Q8IV63 474 aa4.24□□□□□ -1.73
R3HDM1-216ENST00000483065 PRR22Q8IZ63 422 aa4.24□□□□□ -1.73
R3HDM1-216ENST00000483065 C2orf73Q8N5S3 287 aaPredicted RBP4.24□□□□□ -1.73
R3HDM1-216ENST00000483065 CCNYL1Q8N7R7 359 aa4.24□□□□□ -1.73
R3HDM1-216ENST00000483065 FAM222BQ8WU58 562 aa4.24□□□□□ -1.73
R3HDM1-216ENST00000483065 TMED6Q8WW62 240 aa4.24□□□□□ -1.73
R3HDM1-216ENST00000483065 FLYWCH2Q96CP2 140 aaKnown RBP4.24□□□□□ -1.73
R3HDM1-216ENST00000483065 SMIM19Q96E16 107 aa4.24□□□□□ -1.73
R3HDM1-216ENST00000483065 PIK3IP1Q96FE7 263 aa4.24□□□□□ -1.73
R3HDM1-216ENST00000483065 ADTRPQ96IZ2 230 aa4.24□□□□□ -1.73
R3HDM1-216ENST00000483065 PPP1R36Q96LQ0 422 aa4.24□□□□□ -1.73
R3HDM1-216ENST00000483065 KCTD7Q96MP8 289 aa4.24□□□□□ -1.73
R3HDM1-216ENST00000483065 RBP7Q96R05 134 aa4.24□□□□□ -1.73
R3HDM1-216ENST00000483065 NXF2Q9GZY0 626 aaKnown RBP4.24□□□□□ -1.73
R3HDM1-216ENST00000483065 METTL9Q9H1A3 318 aa4.24□□□□□ -1.73
R3HDM1-216ENST00000483065 PRORYQ9H606 182 aa4.24□□□□□ -1.73
R3HDM1-216ENST00000483065 REEP1Q9H902 201 aa4.24□□□□□ -1.73
R3HDM1-216ENST00000483065 ACOT13Q9NPJ3 140 aa4.24□□□□□ -1.73
R3HDM1-216ENST00000483065 TIGARQ9NQ88 270 aa4.24□□□□□ -1.73
R3HDM1-216ENST00000483065 DEPPQ9NTK1 212 aa4.24□□□□□ -1.73
R3HDM1-216ENST00000483065 SLC25A37Q9NYZ2 338 aa4.24□□□□□ -1.73
R3HDM1-216ENST00000483065 IL17CQ9P0M4 197 aa4.24□□□□□ -1.73
R3HDM1-216ENST00000483065 SHPKQ9UHJ6 478 aa4.24□□□□□ -1.73
R3HDM1-216ENST00000483065 OPN4Q9UHM6 478 aa4.24□□□□□ -1.73
R3HDM1-216ENST00000483065 CES1P1Q9UKY3 287 aa4.24□□□□□ -1.73
R3HDM1-216ENST00000483065 CPQQ9Y646 472 aa4.24□□□□□ -1.73
R3HDM1-216ENST00000483065 EIF3AQ14152 1382 aaKnown RBP4.24□□□□□ -1.73
R3HDM1-216ENST00000483065 MN1Q10571 1320 aaPredicted RBP4.23□□□□□ -1.73
R3HDM1-216ENST00000483065 MROH7Q68CQ1 1323 aa4.23□□□□□ -1.73
R3HDM1-216ENST00000483065 NACADO15069 1562 aa4.23□□□□□ -1.73
R3HDM1-216ENST00000483065 LOC100131303A0A0U1RQF7 123 aa4.23□□□□□ -1.73
R3HDM1-216ENST00000483065 CCRL2O00421 344 aa4.23□□□□□ -1.73
R3HDM1-216ENST00000483065 PHF1O43189 567 aaPredicted RBP4.23□□□□□ -1.73
R3HDM1-216ENST00000483065 SYNGR1O43759 233 aa4.23□□□□□ -1.73
R3HDM1-216ENST00000483065 SHOX2O60902 331 aaPredicted RBP4.23□□□□□ -1.73
R3HDM1-216ENST00000483065 ICOSLGO75144 302 aa4.23□□□□□ -1.73
R3HDM1-216ENST00000483065 GATBO75879 557 aaKnown RBP4.23□□□□□ -1.73
R3HDM1-216ENST00000483065 MPZL1O95297 269 aa4.23□□□□□ -1.73
R3HDM1-216ENST00000483065 NUDT3O95989 172 aa4.23□□□□□ -1.73
R3HDM1-216ENST00000483065 SERPINA1P01009 418 aa4.23□□□□□ -1.73
R3HDM1-216ENST00000483065 IFNA16P05015 189 aa4.23□□□□□ -1.73
R3HDM1-216ENST00000483065 WNT2P09544 360 aa4.23□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 61.7 ms