RNA–Protein interactions for RNA: ENST00000471968.1

HDAC3-206, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 529 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-206ENST00000471968 MFSD8Q8NHS3 518 aa5.07□□□□□ -1.6
HDAC3-206ENST00000471968 CNOT9Q92600 299 aaKnown RBP5.07□□□□□ -1.6
HDAC3-206ENST00000471968 FRZBQ92765 325 aa5.07□□□□□ -1.6
HDAC3-206ENST00000471968 HAVCR1Q96D42 359 aa5.07□□□□□ -1.6
HDAC3-206ENST00000471968 IQCDQ96DY2 449 aa5.07□□□□□ -1.6
HDAC3-206ENST00000471968 CFAP36Q96G28 342 aa5.07□□□□□ -1.6
HDAC3-206ENST00000471968 DUS3LQ96G46 650 aaKnown RBP5.07□□□□□ -1.6
HDAC3-206ENST00000471968 ECSITQ9BQ95 431 aa5.07□□□□□ -1.6
HDAC3-206ENST00000471968 ACPTQ9BZG2 426 aa5.07□□□□□ -1.6
HDAC3-206ENST00000471968 CCNB1IP1Q9NPC3 277 aa5.07□□□□□ -1.6
HDAC3-206ENST00000471968 EXOSC3Q9NQT5 275 aaKnown RBP5.07□□□□□ -1.6
HDAC3-206ENST00000471968 KAAG1Q9UBP8 84 aa5.07□□□□□ -1.6
HDAC3-206ENST00000471968 LINC00527Q9UJ94 153 aa5.07□□□□□ -1.6
HDAC3-206ENST00000471968 MTO1Q9Y2Z2 717 aaKnown RBP5.07□□□□□ -1.6
HDAC3-206ENST00000471968 FAM90A8PA6NJQ4 464 aa5.06□□□□□ -1.6
HDAC3-206ENST00000471968 SYCE1LA8MT33 242 aa5.06□□□□□ -1.6
HDAC3-206ENST00000471968 G3V2L1 256 aa5.06□□□□□ -1.6
HDAC3-206ENST00000471968 OVOL1O14753 267 aa5.06□□□□□ -1.6
HDAC3-206ENST00000471968 AIM2O14862 343 aa5.06□□□□□ -1.6
HDAC3-206ENST00000471968 HSPA12AO43301 675 aa5.06□□□□□ -1.6
HDAC3-206ENST00000471968 NDUFB3O43676 98 aa5.06□□□□□ -1.6
HDAC3-206ENST00000471968 ICMTO60725 284 aa5.06□□□□□ -1.6
HDAC3-206ENST00000471968 NPIPB7O75200 414 aa5.06□□□□□ -1.6
HDAC3-206ENST00000471968 STX11O75558 287 aa5.06□□□□□ -1.6
HDAC3-206ENST00000471968 SERPINI2O75830 405 aa5.06□□□□□ -1.6
HDAC3-206ENST00000471968 CNIH1O95406 144 aa5.06□□□□□ -1.6
HDAC3-206ENST00000471968 ABHD16AO95870 558 aa5.06□□□□□ -1.6
HDAC3-206ENST00000471968 HPRP00739 348 aa5.06□□□□□ -1.6
HDAC3-206ENST00000471968 OR8U8P0C7N1 319 aa5.06□□□□□ -1.6
HDAC3-206ENST00000471968 STMN1P16949 149 aa5.06□□□□□ -1.6
HDAC3-206ENST00000471968 ZNF32P17041 273 aa5.06□□□□□ -1.6
HDAC3-206ENST00000471968 ZNF75DP51815 510 aa5.06□□□□□ -1.6
HDAC3-206ENST00000471968 WDR4P57081 412 aaKnown RBP5.06□□□□□ -1.6
HDAC3-206ENST00000471968 ETF1P62495 437 aaKnown RBP5.06□□□□□ -1.6
HDAC3-206ENST00000471968 SLC35B1P78383 322 aa5.06□□□□□ -1.6
HDAC3-206ENST00000471968 KCNJ10P78508 379 aa5.06□□□□□ -1.6
HDAC3-206ENST00000471968 SLC34A1Q06495 639 aa5.06□□□□□ -1.6
HDAC3-206ENST00000471968 TRIM25Q14258 630 aaKnown RBP5.06□□□□□ -1.6
HDAC3-206ENST00000471968 SEL1L2Q5TEA6 688 aa5.06□□□□□ -1.6
HDAC3-206ENST00000471968 OR2T2Q6IF00 324 aa5.06□□□□□ -1.6
HDAC3-206ENST00000471968 LETMD1Q6P1Q0 360 aa5.06□□□□□ -1.6
HDAC3-206ENST00000471968 BLOC1S3Q6QNY0 202 aa5.06□□□□□ -1.6
HDAC3-206ENST00000471968 C16orf82Q7Z2V1 217 aa5.06□□□□□ -1.6
HDAC3-206ENST00000471968 PEX26Q7Z412 305 aa5.06□□□□□ -1.6
HDAC3-206ENST00000471968 COMMD1Q8N668 190 aa5.06□□□□□ -1.6
HDAC3-206ENST00000471968 BHLHE23Q8NDY6 225 aa5.06□□□□□ -1.6
HDAC3-206ENST00000471968 OR8G5Q8NG78 346 aa5.06□□□□□ -1.6
HDAC3-206ENST00000471968 CHPT1Q8WUD6 406 aa5.06□□□□□ -1.6
HDAC3-206ENST00000471968 DCUN1D4Q92564 292 aa5.06□□□□□ -1.6
HDAC3-206ENST00000471968 ERGIC1Q969X5 290 aa5.06□□□□□ -1.6
HDAC3-206ENST00000471968 FOXRED1Q96CU9 486 aaPredicted RBP5.06□□□□□ -1.6
HDAC3-206ENST00000471968 OR7D2Q96RA2 312 aa5.06□□□□□ -1.6
HDAC3-206ENST00000471968 BPIFA3Q9BQP9 254 aa5.06□□□□□ -1.6
HDAC3-206ENST00000471968 SPATA9Q9BWV2 254 aa5.06□□□□□ -1.6
HDAC3-206ENST00000471968 RHOJQ9H4E5 214 aa5.06□□□□□ -1.6
HDAC3-206ENST00000471968 SEBOXQ9HB31 216 aaPredicted RBP5.06□□□□□ -1.6
HDAC3-206ENST00000471968 GLTPQ9NZD2 209 aa5.06□□□□□ -1.6
HDAC3-206ENST00000471968 MDFICQ9P1T7 246 aa5.06□□□□□ -1.6
HDAC3-206ENST00000471968 TNPO3Q9Y5L0 923 aaKnown RBP5.06□□□□□ -1.6
HDAC3-206ENST00000471968 LRP1Q07954 4544 aaKnown RBP5.05□□□□□ -1.6
HDAC3-206ENST00000471968 RHBDL1O75783 438 aa5.05□□□□□ -1.6
HDAC3-206ENST00000471968 AMY1AP04745 511 aa5.05□□□□□ -1.6
HDAC3-206ENST00000471968 AMY2AP04746 511 aa5.05□□□□□ -1.6
HDAC3-206ENST00000471968 HSD3B1P14060 373 aa5.05□□□□□ -1.6
HDAC3-206ENST00000471968 SELLP14151 372 aa5.05□□□□□ -1.6
HDAC3-206ENST00000471968 UQCRBP14927 111 aa5.05□□□□□ -1.6
HDAC3-206ENST00000471968 NQO1P15559 274 aaKnown RBP5.05□□□□□ -1.6
HDAC3-206ENST00000471968 CD24P25063 80 aa5.05□□□□□ -1.6
HDAC3-206ENST00000471968 FPR3P25089 353 aa5.05□□□□□ -1.6
HDAC3-206ENST00000471968 HSD3B2P26439 372 aa5.05□□□□□ -1.6
HDAC3-206ENST00000471968 POU1F1P28069 291 aa5.05□□□□□ -1.6
HDAC3-206ENST00000471968 CDX1P47902 265 aaPredicted RBP5.05□□□□□ -1.6
HDAC3-206ENST00000471968 CENPAP49450 140 aa5.05□□□□□ -1.6
HDAC3-206ENST00000471968 DYNLT3P51808 116 aa5.05□□□□□ -1.6
HDAC3-206ENST00000471968 RAD23AP54725 363 aa5.05□□□□□ -1.6
HDAC3-206ENST00000471968 PDIA2Q13087 525 aaKnown RBP5.05□□□□□ -1.6
HDAC3-206ENST00000471968 FASTKD3Q14CZ7 662 aaKnown RBP5.05□□□□□ -1.6
HDAC3-206ENST00000471968 ZNF385BQ569K4 471 aa5.05□□□□□ -1.6
HDAC3-206ENST00000471968 LRRC10Q5BKY1 277 aa5.05□□□□□ -1.6
HDAC3-206ENST00000471968 WDR38Q5JTN6 314 aa5.05□□□□□ -1.6
HDAC3-206ENST00000471968 HP1BP3Q5SSJ5 553 aaPredicted RBP5.05□□□□□ -1.6
HDAC3-206ENST00000471968 LDLRAD2Q5SZI1 272 aa5.05□□□□□ -1.6
HDAC3-206ENST00000471968 ZDHHC24Q6UX98 284 aa5.05□□□□□ -1.6
HDAC3-206ENST00000471968 LINC00322Q6ZN03 302 aaPredicted RBP5.05□□□□□ -1.6
HDAC3-206ENST00000471968 NUDCD3Q8IVD9 361 aa5.05□□□□□ -1.6
HDAC3-206ENST00000471968 CADM2Q8N3J6 435 aa5.05□□□□□ -1.6
HDAC3-206ENST00000471968 DRAM1Q8N682 238 aa5.05□□□□□ -1.6
HDAC3-206ENST00000471968 ANKFN1Q8N957 763 aa5.05□□□□□ -1.6
HDAC3-206ENST00000471968 ZNF454Q8N9F8 522 aa5.05□□□□□ -1.6
HDAC3-206ENST00000471968 GRK7Q8WTQ7 553 aa5.05□□□□□ -1.6
HDAC3-206ENST00000471968 TMEM54Q969K7 222 aa5.05□□□□□ -1.6
HDAC3-206ENST00000471968 MALSU1Q96EH3 234 aa5.05□□□□□ -1.6
HDAC3-206ENST00000471968 ZNF582Q96NG8 517 aaPredicted RBP5.05□□□□□ -1.6
HDAC3-206ENST00000471968 SLC25A33Q9BSK2 321 aa5.05□□□□□ -1.6
HDAC3-206ENST00000471968 HCAR1Q9BXC0 346 aa5.05□□□□□ -1.6
HDAC3-206ENST00000471968 KCNN2Q9H2S1 579 aa5.05□□□□□ -1.6
HDAC3-206ENST00000471968 GHITMQ9H3K2 345 aa5.05□□□□□ -1.6
HDAC3-206ENST00000471968 FN3KQ9H479 309 aa5.05□□□□□ -1.6
HDAC3-206ENST00000471968 HEXA-AS1Q9H8Q6 139 aa5.05□□□□□ -1.6
HDAC3-206ENST00000471968 LIN7BQ9HAP6 207 aa5.05□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 73.5 ms