RNA–Protein interactions for RNA: ENST00000442461.6

LIN54-202, Transcript of lin-54 DREAM MuvB core complex component, humanhuman

TSL 1 (best) BASIC

Gene LIN54, Length 4,254 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN54-202ENST00000442461 PARD6GQ9BYG4 376 aaPredicted RBP9.43□□□□□ -0.9
LIN54-202ENST00000442461 RAB18Q9NP72 206 aa9.43□□□□□ -0.9
LIN54-202ENST00000442461 RNF24Q9Y225 148 aa9.43□□□□□ -0.9
LIN54-202ENST00000442461 PCDHGA1Q9Y5H4 931 aa9.43□□□□□ -0.9
LIN54-202ENST00000442461 PRAMEF27A3QJZ7 478 aa9.43□□□□□ -0.9
LIN54-202ENST00000442461 NPIPB15A6NHN6 443 aaPredicted RBP9.43□□□□□ -0.9
LIN54-202ENST00000442461 DBX1A6NMT0 343 aa9.43□□□□□ -0.9
LIN54-202ENST00000442461 B4DEV8 164 aa9.43□□□□□ -0.9
LIN54-202ENST00000442461 GJB3O75712 270 aa9.43□□□□□ -0.9
LIN54-202ENST00000442461 CRHP06850 196 aa9.43□□□□□ -0.9
LIN54-202ENST00000442461 ZNF93P35789 620 aaPredicted RBP9.43□□□□□ -0.9
LIN54-202ENST00000442461 CD200P41217 278 aa9.43□□□□□ -0.9
LIN54-202ENST00000442461 NAAAQ02083 359 aa9.43□□□□□ -0.9
LIN54-202ENST00000442461 SMAD2Q15796 467 aaKnown RBP9.43□□□□□ -0.9
LIN54-202ENST00000442461 SLC36A2Q495M3 483 aa9.43□□□□□ -0.9
LIN54-202ENST00000442461 PRAMEF9Q5VWM5 478 aa9.43□□□□□ -0.9
LIN54-202ENST00000442461 TMPPEQ6ZT21 453 aa9.43□□□□□ -0.9
LIN54-202ENST00000442461 WDR5BQ86VZ2 330 aa9.43□□□□□ -0.9
LIN54-202ENST00000442461 PRSS58Q8IYP2 241 aa9.43□□□□□ -0.9
LIN54-202ENST00000442461 PIK3IP1Q96FE7 263 aa9.43□□□□□ -0.9
LIN54-202ENST00000442461 C11orf84Q9BUA3 381 aaPredicted RBP9.43□□□□□ -0.9
LIN54-202ENST00000442461 PLA2G12AQ9BZM1 189 aa9.43□□□□□ -0.9
LIN54-202ENST00000442461 DNAJC5Q9H3Z4 198 aa9.43□□□□□ -0.9
LIN54-202ENST00000442461 ZNF331Q9NQX6 463 aaPredicted RBP9.43□□□□□ -0.9
LIN54-202ENST00000442461 ADAM29Q9UKF5 820 aa9.43□□□□□ -0.9
LIN54-202ENST00000442461 TNFSF18Q9UNG2 199 aa9.43□□□□□ -0.9
LIN54-202ENST00000442461 C11orf97A0A1B0GVM6 126 aaPredicted RBP9.42□□□□□ -0.9
LIN54-202ENST00000442461 VEGFDO43915 354 aa9.42□□□□□ -0.9
LIN54-202ENST00000442461 DUS4LO95620 317 aaKnown RBP9.42□□□□□ -0.9
LIN54-202ENST00000442461 KLK3P07288 261 aaPredicted RBP9.42□□□□□ -0.9
LIN54-202ENST00000442461 HNRNPA2B1P22626 353 aaKnown RBP9.42□□□□□ -0.9
LIN54-202ENST00000442461 CSNK1A1P48729 337 aa9.42□□□□□ -0.9
LIN54-202ENST00000442461 IKZF1Q13422 519 aa9.42□□□□□ -0.9
LIN54-202ENST00000442461 SPNS3Q6ZMD2 512 aa9.42□□□□□ -0.9
LIN54-202ENST00000442461 DEFB128Q7Z7B8 93 aa9.42□□□□□ -0.9
LIN54-202ENST00000442461 LMX1AQ8TE12 382 aa9.42□□□□□ -0.9
LIN54-202ENST00000442461 WNT2BQ93097 391 aa9.42□□□□□ -0.9
LIN54-202ENST00000442461 TSSK2Q96PF2 358 aa9.42□□□□□ -0.9
LIN54-202ENST00000442461 CIB3Q96Q77 187 aaPredicted RBP9.42□□□□□ -0.9
LIN54-202ENST00000442461 PARP11Q9NR21 331 aa9.42□□□□□ -0.9
LIN54-202ENST00000442461 HSBP1O75506 76 aa9.42□□□□□ -0.9
LIN54-202ENST00000442461 EOMESO95936 686 aa9.42□□□□□ -0.9
LIN54-202ENST00000442461 F13BP05160 661 aa9.42□□□□□ -0.9
LIN54-202ENST00000442461 IQCF3P0C7M6 154 aa9.42□□□□□ -0.9
LIN54-202ENST00000442461 PPP1CBP62140 327 aa9.42□□□□□ -0.9
LIN54-202ENST00000442461 TXNDC8Q6A555 127 aa9.42□□□□□ -0.9
LIN54-202ENST00000442461 WDR88Q6ZMY6 472 aa9.42□□□□□ -0.9
LIN54-202ENST00000442461 SLC24A4Q8NFF2 622 aa9.42□□□□□ -0.9
LIN54-202ENST00000442461 OR4F5Q8NH21 305 aa9.42□□□□□ -0.9
LIN54-202ENST00000442461 DCBLD2Q96PD2 775 aa9.42□□□□□ -0.9
LIN54-202ENST00000442461 OR4F4Q96R69 305 aa9.42□□□□□ -0.9
LIN54-202ENST00000442461 TAAR9Q96RI9 348 aa9.42□□□□□ -0.9
LIN54-202ENST00000442461 LINC00597Q9H2U6 94 aa9.42□□□□□ -0.9
LIN54-202ENST00000442461 RNF181Q9P0P0 153 aa9.42□□□□□ -0.9
LIN54-202ENST00000442461 A4GNTQ9UNA3 340 aa9.42□□□□□ -0.9
LIN54-202ENST00000442461 FLVCR1Q9Y5Y0 555 aa9.42□□□□□ -0.9
LIN54-202ENST00000442461 C9orf170A2RU37 121 aa9.42□□□□□ -0.9
LIN54-202ENST00000442461 C17orf112F2Z3M2 114 aa9.42□□□□□ -0.9
LIN54-202ENST00000442461 GJB5O95377 273 aa9.42□□□□□ -0.9
LIN54-202ENST00000442461 GPANK1O95872 356 aa9.42□□□□□ -0.9
LIN54-202ENST00000442461 CD14P08571 375 aa9.42□□□□□ -0.9
LIN54-202ENST00000442461 HIST1H1TP22492 207 aaPredicted RBP9.42□□□□□ -0.9
LIN54-202ENST00000442461 RAB32Q13637 225 aa9.42□□□□□ -0.9
LIN54-202ENST00000442461 AARDQ4LEZ3 155 aa9.42□□□□□ -0.9
LIN54-202ENST00000442461 ANGPTL5Q86XS5 388 aa9.42□□□□□ -0.9
LIN54-202ENST00000442461 ZNF100Q8IYN0 542 aa9.42□□□□□ -0.9
LIN54-202ENST00000442461 CPXM2Q8N436 756 aa9.42□□□□□ -0.9
LIN54-202ENST00000442461 EIF4E3Q8N5X7 224 aaKnown RBP9.42□□□□□ -0.9
LIN54-202ENST00000442461 ZSCAN4Q8NAM6 433 aaPredicted RBP9.42□□□□□ -0.9
LIN54-202ENST00000442461 OR8D2Q9GZM6 311 aa9.42□□□□□ -0.9
LIN54-202ENST00000442461 OR10A2Q9H208 303 aa9.42□□□□□ -0.9
LIN54-202ENST00000442461 P2RY12Q9H244 342 aa9.42□□□□□ -0.9
LIN54-202ENST00000442461 GLIPR2Q9H4G4 154 aa9.42□□□□□ -0.9
LIN54-202ENST00000442461 FBXL17Q9UF56 701 aa9.42□□□□□ -0.9
LIN54-202ENST00000442461 PAM16Q9Y3D7 125 aa9.42□□□□□ -0.9
LIN54-202ENST00000442461 RBFOX3A6NFN3 312 aa9.42□□□□□ -0.9
LIN54-202ENST00000442461 NPIPA2E9PIF3 369 aa9.42□□□□□ -0.9
LIN54-202ENST00000442461 NPIPA3F8WFD2 350 aa9.42□□□□□ -0.9
LIN54-202ENST00000442461 SULT2B1O00204 365 aa9.42□□□□□ -0.9
LIN54-202ENST00000442461 HMGN4O00479 90 aa9.42□□□□□ -0.9
LIN54-202ENST00000442461 GPR37O15354 613 aa9.42□□□□□ -0.9
LIN54-202ENST00000442461 XRCC2O43543 280 aa9.42□□□□□ -0.9
LIN54-202ENST00000442461 HOXA11P31270 313 aaPredicted RBP9.42□□□□□ -0.9
LIN54-202ENST00000442461 GALR1P47211 349 aa9.42□□□□□ -0.9
LIN54-202ENST00000442461 CSNK1DP48730 415 aa9.42□□□□□ -0.9
LIN54-202ENST00000442461 RAB28P51157 221 aa9.42□□□□□ -0.9
LIN54-202ENST00000442461 RPL24P83731 157 aaKnown RBP9.42□□□□□ -0.9
LIN54-202ENST00000442461 MALLQ13021 153 aa9.42□□□□□ -0.9
LIN54-202ENST00000442461 SMAD4Q13485 552 aaKnown RBP9.42□□□□□ -0.9
LIN54-202ENST00000442461 SERTAD2Q14140 314 aa9.42□□□□□ -0.9
LIN54-202ENST00000442461 PHLDA2Q53GA4 152 aa9.42□□□□□ -0.9
LIN54-202ENST00000442461 LAIR2Q6ISS4 152 aa9.42□□□□□ -0.9
LIN54-202ENST00000442461 MAML2Q8IZL2 1156 aaPredicted RBP9.42□□□□□ -0.9
LIN54-202ENST00000442461 ARRDC1Q8N5I2 433 aa9.42□□□□□ -0.9
LIN54-202ENST00000442461 OR52R1Q8NGF1 315 aa9.42□□□□□ -0.9
LIN54-202ENST00000442461 SLC35D1Q9NTN3 355 aa9.42□□□□□ -0.9
LIN54-202ENST00000442461 TP53TG5Q9Y2B4 290 aa9.42□□□□□ -0.9
LIN54-202ENST00000442461 A0A0U1RQF3 1178 aa9.41□□□□□ -0.9
LIN54-202ENST00000442461 A0A1B0GWA3 101 aa9.41□□□□□ -0.9
LIN54-202ENST00000442461 COCHO43405 550 aa9.41□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 988.9 ms