RNA–Protein interactions for RNA: ENST00000417997.1

HMGB3P20-201, Transcript of high mobility group box 3 pseudogene 20, humanhuman

BASIC

Gene HMGB3P20, Length 600 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P20-201ENST00000417997 ZNF426Q9BUY5 554 aa3.36□□□□□ -1.87
HMGB3P20-201ENST00000417997 MND1Q9BWT6 205 aa3.36□□□□□ -1.87
HMGB3P20-201ENST00000417997 TAPBPLQ9BX59 468 aa3.36□□□□□ -1.87
HMGB3P20-201ENST00000417997 SPRY4Q9C004 299 aa3.36□□□□□ -1.87
HMGB3P20-201ENST00000417997 RACGAP1Q9H0H5 632 aa3.36□□□□□ -1.87
HMGB3P20-201ENST00000417997 UBQLN3Q9H347 655 aa3.36□□□□□ -1.87
HMGB3P20-201ENST00000417997 FN3KQ9H479 309 aa3.36□□□□□ -1.87
HMGB3P20-201ENST00000417997 DUSP21Q9H596 190 aa3.36□□□□□ -1.87
HMGB3P20-201ENST00000417997 FKRPQ9H9S5 495 aa3.36□□□□□ -1.87
HMGB3P20-201ENST00000417997 MCCC2Q9HCC0 563 aa3.36□□□□□ -1.87
HMGB3P20-201ENST00000417997 AMBNQ9NP70 447 aa3.36□□□□□ -1.87
HMGB3P20-201ENST00000417997 ACOT13Q9NPJ3 140 aa3.36□□□□□ -1.87
HMGB3P20-201ENST00000417997 MEPEQ9NQ76 525 aaPredicted RBP3.36□□□□□ -1.87
HMGB3P20-201ENST00000417997 SERINC1Q9NRX5 453 aa3.36□□□□□ -1.87
HMGB3P20-201ENST00000417997 PLCXD1Q9NUJ7 323 aa3.36□□□□□ -1.87
HMGB3P20-201ENST00000417997 PAK1IP1Q9NWT1 392 aaPredicted RBP3.36□□□□□ -1.87
HMGB3P20-201ENST00000417997 P4HTMQ9NXG6 502 aa3.36□□□□□ -1.87
HMGB3P20-201ENST00000417997 IL20Q9NYY1 176 aa3.36□□□□□ -1.87
HMGB3P20-201ENST00000417997 MED11Q9P086 117 aa3.36□□□□□ -1.87
HMGB3P20-201ENST00000417997 TEKT2Q9UIF3 430 aa3.36□□□□□ -1.87
HMGB3P20-201ENST00000417997 KLHL21Q9UJP4 597 aa3.36□□□□□ -1.87
HMGB3P20-201ENST00000417997 OSGIN1Q9UJX0 560 aa3.36□□□□□ -1.87
HMGB3P20-201ENST00000417997 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP3.36□□□□□ -1.87
HMGB3P20-201ENST00000417997 SIGLEC7Q9Y286 467 aa3.36□□□□□ -1.87
HMGB3P20-201ENST00000417997 GPR52Q9Y2T5 361 aa3.36□□□□□ -1.87
HMGB3P20-201ENST00000417997 SLC6A5Q9Y345 797 aa3.36□□□□□ -1.87
HMGB3P20-201ENST00000417997 EXOSC1Q9Y3B2 195 aaKnown RBP3.36□□□□□ -1.87
HMGB3P20-201ENST00000417997 MRPS18BQ9Y676 258 aaKnown RBP3.36□□□□□ -1.87
HMGB3P20-201ENST00000417997 COMMD3-BMI1R4GMX3 469 aa3.36□□□□□ -1.87
HMGB3P20-201ENST00000417997 SDK1Q7Z5N4 2213 aa3.36□□□□□ -1.87
HMGB3P20-201ENST00000417997 ZNF318Q5VUA4 2279 aa3.36□□□□□ -1.87
HMGB3P20-201ENST00000417997 MPDZO75970 2070 aa3.35□□□□□ -1.87
HMGB3P20-201ENST00000417997 UNC80Q8N2C7 3258 aa3.35□□□□□ -1.87
HMGB3P20-201ENST00000417997 IGKV1D-42A0A075B6H8 117 aa3.35□□□□□ -1.87
HMGB3P20-201ENST00000417997 A0A087WZY1 265 aa3.35□□□□□ -1.87
HMGB3P20-201ENST00000417997 TEX13CA0A0J9YWL9 993 aa3.35□□□□□ -1.87
HMGB3P20-201ENST00000417997 LOC101059948A0A1B0GTJ6 334 aa3.35□□□□□ -1.87
HMGB3P20-201ENST00000417997 A0A1W2PNU3 283 aaPredicted RBP3.35□□□□□ -1.87
HMGB3P20-201ENST00000417997 SH2D7A6NKC9 451 aaPredicted RBP3.35□□□□□ -1.87
HMGB3P20-201ENST00000417997 FAM183AA6NL82 134 aa3.35□□□□□ -1.87
HMGB3P20-201ENST00000417997 HSPB2A8KAH6 182 aa3.35□□□□□ -1.87
HMGB3P20-201ENST00000417997 C17orf51A8MQB3 221 aa3.35□□□□□ -1.87
HMGB3P20-201ENST00000417997 A8MVM7 634 aa3.35□□□□□ -1.87
HMGB3P20-201ENST00000417997 LRRN3E7EW58 273 aa3.35□□□□□ -1.87
HMGB3P20-201ENST00000417997 C11orf98E9PRG8 122 aa3.35□□□□□ -1.87
HMGB3P20-201ENST00000417997 G3V3Y1 287 aa3.35□□□□□ -1.87
HMGB3P20-201ENST00000417997 BLOC1S5-TXNDC5H3BN57 136 aa3.35□□□□□ -1.87
HMGB3P20-201ENST00000417997 BHLHE40O14503 412 aa3.35□□□□□ -1.87
HMGB3P20-201ENST00000417997 XKRYO14609 159 aa3.35□□□□□ -1.87
HMGB3P20-201ENST00000417997 RNF13O43567 381 aa3.35□□□□□ -1.87
HMGB3P20-201ENST00000417997 OR2T1O43869 369 aa3.35□□□□□ -1.87
HMGB3P20-201ENST00000417997 ZNF354AO60765 605 aaPredicted RBP3.35□□□□□ -1.87
HMGB3P20-201ENST00000417997 SLC2A10O95528 541 aa3.35□□□□□ -1.87
HMGB3P20-201ENST00000417997 RENP00797 406 aa3.35□□□□□ -1.87
HMGB3P20-201ENST00000417997 IGF2P01344 180 aa3.35□□□□□ -1.87
HMGB3P20-201ENST00000417997 BGLAPP02818 100 aa3.35□□□□□ -1.87
HMGB3P20-201ENST00000417997 SERPINA7P05543 415 aa3.35□□□□□ -1.87
HMGB3P20-201ENST00000417997 SP1P08047 785 aa3.35□□□□□ -1.87
HMGB3P20-201ENST00000417997 HSMCR30P0CW71 290 aa3.35□□□□□ -1.87
HMGB3P20-201ENST00000417997 CCL3P10147 92 aa3.35□□□□□ -1.87
HMGB3P20-201ENST00000417997 CEACAM1P13688 526 aa3.35□□□□□ -1.87
HMGB3P20-201ENST00000417997 SRD5A1P18405 259 aa3.35□□□□□ -1.87
HMGB3P20-201ENST00000417997 AHCYP23526 432 aa3.35□□□□□ -1.87
HMGB3P20-201ENST00000417997 APOBEC1P41238 236 aaKnown RBP3.35□□□□□ -1.87
HMGB3P20-201ENST00000417997 EIF1P41567 113 aaKnown RBP3.35□□□□□ -1.87
HMGB3P20-201ENST00000417997 CASP3P42574 277 aa3.35□□□□□ -1.87
HMGB3P20-201ENST00000417997 MAP2K4P45985 399 aa3.35□□□□□ -1.87
HMGB3P20-201ENST00000417997 CYB561P49447 251 aa3.35□□□□□ -1.87
HMGB3P20-201ENST00000417997 HILS1P60008 231 aa3.35□□□□□ -1.87
HMGB3P20-201ENST00000417997 RPS4XP62701 263 aaKnown RBP3.35□□□□□ -1.87
HMGB3P20-201ENST00000417997 ERVK-25P63136 954 aa3.35□□□□□ -1.87
HMGB3P20-201ENST00000417997 ACTC1P68032 377 aa3.35□□□□□ -1.87
HMGB3P20-201ENST00000417997 ACTA1P68133 377 aa3.35□□□□□ -1.87
HMGB3P20-201ENST00000417997 EMX1Q04741 257 aaPredicted RBP3.35□□□□□ -1.87
HMGB3P20-201ENST00000417997 RPL18Q07020 188 aaKnown RBP3.35□□□□□ -1.87
HMGB3P20-201ENST00000417997 ST3GAL4Q11206 333 aa3.35□□□□□ -1.87
HMGB3P20-201ENST00000417997 RAB40BQ12829 278 aa3.35□□□□□ -1.87
HMGB3P20-201ENST00000417997 AIMP2Q13155 320 aaKnown RBP3.35□□□□□ -1.87
HMGB3P20-201ENST00000417997 SELENBP1Q13228 472 aa3.35□□□□□ -1.87
HMGB3P20-201ENST00000417997 TMED1Q13445 227 aa3.35□□□□□ -1.87
HMGB3P20-201ENST00000417997 KRR1Q13601 381 aaKnown RBP3.35□□□□□ -1.87
HMGB3P20-201ENST00000417997 CRMP1Q14194 572 aa3.35□□□□□ -1.87
HMGB3P20-201ENST00000417997 OR7A5Q15622 319 aa3.35□□□□□ -1.87
HMGB3P20-201ENST00000417997 TOMM34Q15785 309 aaPredicted RBP3.35□□□□□ -1.87
HMGB3P20-201ENST00000417997 HSPB2Q16082 182 aa3.35□□□□□ -1.87
HMGB3P20-201ENST00000417997 SGCBQ16585 318 aa3.35□□□□□ -1.87
HMGB3P20-201ENST00000417997 PLPPR5Q32ZL2 321 aa3.35□□□□□ -1.87
HMGB3P20-201ENST00000417997 CNPY1Q3B7I2 92 aa3.35□□□□□ -1.87
HMGB3P20-201ENST00000417997 ZNF791Q3KP31 576 aaPredicted RBP3.35□□□□□ -1.87
HMGB3P20-201ENST00000417997 TIMM50Q3ZCQ8 353 aa3.35□□□□□ -1.87
HMGB3P20-201ENST00000417997 FAM69AQ5T7M9 428 aa3.35□□□□□ -1.87
HMGB3P20-201ENST00000417997 C1orf140Q5VVS0 124 aa3.35□□□□□ -1.87
HMGB3P20-201ENST00000417997 RAET1LQ5VY80 246 aa3.35□□□□□ -1.87
HMGB3P20-201ENST00000417997 SLC22A10Q63ZE4 541 aa3.35□□□□□ -1.87
HMGB3P20-201ENST00000417997 XAF1Q6GPH4 301 aa3.35□□□□□ -1.87
HMGB3P20-201ENST00000417997 NIPAL3Q6P499 406 aa3.35□□□□□ -1.87
HMGB3P20-201ENST00000417997 LEG1Q6P5S2 330 aa3.35□□□□□ -1.87
HMGB3P20-201ENST00000417997 TMEM81Q6P7N7 255 aa3.35□□□□□ -1.87
HMGB3P20-201ENST00000417997 B3GNT6Q6ZMB0 384 aa3.35□□□□□ -1.87
HMGB3P20-201ENST00000417997 DPY19L2P2Q6ZN68 376 aa3.35□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 62.5 ms