RNA–Protein interactions for RNA: ENST00000413442.5

USP54-202, Transcript of ubiquitin specific peptidase 54, humanhuman

TSL 4

Gene USP54, Length 543 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP54-202ENST00000413442 MZT1Q08AG7 82 aa5.48□□□□□ -1.53
USP54-202ENST00000413442 MALLQ13021 153 aa5.48□□□□□ -1.53
USP54-202ENST00000413442 RIN1Q13671 783 aa5.48□□□□□ -1.53
USP54-202ENST00000413442 HFEQ30201 348 aa5.48□□□□□ -1.53
USP54-202ENST00000413442 SLC35D3Q5M8T2 416 aa5.48□□□□□ -1.53
USP54-202ENST00000413442 ELFN2Q5R3F8 820 aa5.48□□□□□ -1.53
USP54-202ENST00000413442 ZNF362Q5T0B9 420 aaPredicted RBP5.48□□□□□ -1.53
USP54-202ENST00000413442 LEG1Q6P5S2 330 aa5.48□□□□□ -1.53
USP54-202ENST00000413442 FBXW12Q6X9E4 464 aa5.48□□□□□ -1.53
USP54-202ENST00000413442 THSD4Q6ZMP0 1018 aa5.48□□□□□ -1.53
USP54-202ENST00000413442 COLCA1Q6ZS62 124 aa5.48□□□□□ -1.53
USP54-202ENST00000413442 IGFN1Q86VF2 1251 aa5.48□□□□□ -1.53
USP54-202ENST00000413442 WDFY1Q8IWB7 410 aa5.48□□□□□ -1.53
USP54-202ENST00000413442 ADGRG5Q8IZF4 528 aa5.48□□□□□ -1.53
USP54-202ENST00000413442 OR6V1Q8N148 313 aa5.48□□□□□ -1.53
USP54-202ENST00000413442 SVOPLQ8N434 492 aa5.48□□□□□ -1.53
USP54-202ENST00000413442 CELF2-AS1Q8N7Q2 184 aa5.48□□□□□ -1.53
USP54-202ENST00000413442 PLPP7Q8NBV4 271 aa5.48□□□□□ -1.53
USP54-202ENST00000413442 SLC26A10Q8NG04 563 aa5.48□□□□□ -1.53
USP54-202ENST00000413442 OR52E2Q8NGJ4 325 aa5.48□□□□□ -1.53
USP54-202ENST00000413442 TEX47Q8TBZ9 253 aa5.48□□□□□ -1.53
USP54-202ENST00000413442 KLF14Q8TD94 323 aaPredicted RBP5.48□□□□□ -1.53
USP54-202ENST00000413442 CANT1Q8WVQ1 401 aa5.48□□□□□ -1.53
USP54-202ENST00000413442 RAB1CQ92928 201 aa5.48□□□□□ -1.53
USP54-202ENST00000413442 SPTSSAQ969W0 71 aa5.48□□□□□ -1.53
USP54-202ENST00000413442 ERGIC1Q969X5 290 aa5.48□□□□□ -1.53
USP54-202ENST00000413442 ELMOD3Q96FG2 381 aa5.48□□□□□ -1.53
USP54-202ENST00000413442 TIMD4Q96H15 378 aa5.48□□□□□ -1.53
USP54-202ENST00000413442 SAMD8Q96LT4 415 aa5.48□□□□□ -1.53
USP54-202ENST00000413442 FOXN4Q96NZ1 517 aa5.48□□□□□ -1.53
USP54-202ENST00000413442 NMNAT3Q96T66 252 aa5.48□□□□□ -1.53
USP54-202ENST00000413442 DDOQ99489 341 aa5.48□□□□□ -1.53
USP54-202ENST00000413442 FEVQ99581 238 aa5.48□□□□□ -1.53
USP54-202ENST00000413442 GPA33Q99795 319 aa5.48□□□□□ -1.53
USP54-202ENST00000413442 HCAR1Q9BXC0 346 aa5.48□□□□□ -1.53
USP54-202ENST00000413442 FN3KQ9H479 309 aa5.48□□□□□ -1.53
USP54-202ENST00000413442 CMC2Q9NRP2 79 aa5.48□□□□□ -1.53
USP54-202ENST00000413442 TAAR3PQ9P1P4 343 aa5.48□□□□□ -1.53
USP54-202ENST00000413442 IL19Q9UHD0 177 aa5.48□□□□□ -1.53
USP54-202ENST00000413442 CYB5R1Q9UHQ9 305 aa5.48□□□□□ -1.53
USP54-202ENST00000413442 ZNF391Q9UJN7 358 aa5.48□□□□□ -1.53
USP54-202ENST00000413442 CDC42EP3Q9UKI2 254 aa5.48□□□□□ -1.53
USP54-202ENST00000413442 USF3Q68DE3 2245 aa5.48□□□□□ -1.53
USP54-202ENST00000413442 CELSR1Q9NYQ6 3014 aa5.48□□□□□ -1.53
USP54-202ENST00000413442 IGKV1D-43A0A0B4J1Z2 117 aa5.47□□□□□ -1.53
USP54-202ENST00000413442 OR6C68A6NDL8 312 aa5.47□□□□□ -1.53
USP54-202ENST00000413442 TRIM64A6NGJ6 449 aa5.47□□□□□ -1.53
USP54-202ENST00000413442 TRIM64BA6NI03 449 aa5.47□□□□□ -1.53
USP54-202ENST00000413442 ACOD1A6NK06 481 aa5.47□□□□□ -1.53
USP54-202ENST00000413442 PRODHO43272 600 aa5.47□□□□□ -1.53
USP54-202ENST00000413442 DOK2O60496 412 aa5.47□□□□□ -1.53
USP54-202ENST00000413442 NDUFS7O75251 213 aa5.47□□□□□ -1.53
USP54-202ENST00000413442 E2F6O75461 281 aa5.47□□□□□ -1.53
USP54-202ENST00000413442 CRLF1O75462 422 aa5.47□□□□□ -1.53
USP54-202ENST00000413442 HLA-DQA2P01906 255 aa5.47□□□□□ -1.53
USP54-202ENST00000413442 FAM157BP0CG42 384 aa5.47□□□□□ -1.53
USP54-202ENST00000413442 OSMP13725 252 aa5.47□□□□□ -1.53
USP54-202ENST00000413442 ZNF3P17036 446 aa5.47□□□□□ -1.53
USP54-202ENST00000413442 HNF1AP20823 631 aa5.47□□□□□ -1.53
USP54-202ENST00000413442 GATA3P23771 443 aa5.47□□□□□ -1.53
USP54-202ENST00000413442 FASP25445 335 aa5.47□□□□□ -1.53
USP54-202ENST00000413442 HTR5AP47898 357 aa5.47□□□□□ -1.53
USP54-202ENST00000413442 ZNF81P51508 661 aa5.47□□□□□ -1.53
USP54-202ENST00000413442 MMP15P51511 669 aa5.47□□□□□ -1.53
USP54-202ENST00000413442 ACTR3P61158 418 aa5.47□□□□□ -1.53
USP54-202ENST00000413442 CBX1P83916 185 aa5.47□□□□□ -1.53
USP54-202ENST00000413442 CDK5Q00535 292 aa5.47□□□□□ -1.53
USP54-202ENST00000413442 KHDRBS1Q07666 443 aaKnown RBP eCLIP5.47□□□□□ -1.53
USP54-202ENST00000413442 CDK5R2Q13319 367 aa5.47□□□□□ -1.53
USP54-202ENST00000413442 TMEM249Q2WGJ8 235 aa5.47□□□□□ -1.53
USP54-202ENST00000413442 C11orf91Q3C1V1 193 aa5.47□□□□□ -1.53
USP54-202ENST00000413442 ZNF774Q6NX45 483 aa5.47□□□□□ -1.53
USP54-202ENST00000413442 SHQ1Q6PI26 577 aaKnown RBP5.47□□□□□ -1.53
USP54-202ENST00000413442 DEGS2Q6QHC5 323 aa5.47□□□□□ -1.53
USP54-202ENST00000413442 DRAM2Q6UX65 266 aa5.47□□□□□ -1.53
USP54-202ENST00000413442 PTCHD4Q6ZW05 846 aa5.47□□□□□ -1.53
USP54-202ENST00000413442 VASH1Q7L8A9 365 aaPredicted RBP5.47□□□□□ -1.53
USP54-202ENST00000413442 MYPOPQ86VE0 399 aaPredicted RBP5.47□□□□□ -1.53
USP54-202ENST00000413442 SPATA24Q86W54 205 aa5.47□□□□□ -1.53
USP54-202ENST00000413442 EGFL6Q8IUX8 553 aa5.47□□□□□ -1.53
USP54-202ENST00000413442 CIARTQ8N365 385 aaPredicted RBP5.47□□□□□ -1.53
USP54-202ENST00000413442 PARP8Q8N3A8 854 aa5.47□□□□□ -1.53
USP54-202ENST00000413442 ZNF525Q8N782 197 aa5.47□□□□□ -1.53
USP54-202ENST00000413442 ZNF454Q8N9F8 522 aa5.47□□□□□ -1.53
USP54-202ENST00000413442 SPERTQ8NA61 448 aa5.47□□□□□ -1.53
USP54-202ENST00000413442 AQP11Q8NBQ7 271 aa5.47□□□□□ -1.53
USP54-202ENST00000413442 OR10G2Q8NGC3 310 aa5.47□□□□□ -1.53
USP54-202ENST00000413442 OR13G1Q8NGZ3 307 aa5.47□□□□□ -1.53
USP54-202ENST00000413442 OR4K13Q8NH42 304 aa5.47□□□□□ -1.53
USP54-202ENST00000413442 OR5K1Q8NHB7 308 aa5.47□□□□□ -1.53
USP54-202ENST00000413442 AKR7LQ8NHP1 331 aa5.47□□□□□ -1.53
USP54-202ENST00000413442 MYCBPQ99417 103 aaPredicted RBP5.47□□□□□ -1.53
USP54-202ENST00000413442 MNTQ99583 582 aa5.47□□□□□ -1.53
USP54-202ENST00000413442 ATF6BQ99941 703 aa5.47□□□□□ -1.53
USP54-202ENST00000413442 RBM4Q9BWF3 364 aaKnown RBP5.47□□□□□ -1.53
USP54-202ENST00000413442 TSSK6Q9BXA6 273 aa5.47□□□□□ -1.53
USP54-202ENST00000413442 C1QTNF5Q9BXJ0 243 aa5.47□□□□□ -1.53
USP54-202ENST00000413442 NMNAT2Q9BZQ4 307 aa5.47□□□□□ -1.53
USP54-202ENST00000413442 NIPAL2Q9H841 368 aa5.47□□□□□ -1.53
USP54-202ENST00000413442 MARCH7Q9H992 704 aa5.47□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 70.4 ms