RNA–Protein interactions for RNA: ENST00000395794.2

CXCL12-205, Transcript of C-X-C motif chemokine ligand 12, humanhuman

TSL 1 (best) BASIC

Gene CXCL12, Length 1,052 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-205ENST00000395794 CDKN2AP42771 156 aaKnown RBP11.71□□□□□ -0.53
CXCL12-205ENST00000395794 MMP15P51511 669 aa11.71□□□□□ -0.53
CXCL12-205ENST00000395794 DVL1P1P54792 670 aaPredicted RBP11.71□□□□□ -0.53
CXCL12-205ENST00000395794 MVKQ03426 396 aa11.71□□□□□ -0.53
CXCL12-205ENST00000395794 SLC3A1Q07837 685 aa11.71□□□□□ -0.53
CXCL12-205ENST00000395794 MTX3Q5HYI7 312 aa11.71□□□□□ -0.53
CXCL12-205ENST00000395794 C1orf94Q6P1W5 598 aa11.71□□□□□ -0.53
CXCL12-205ENST00000395794 LEG1Q6P5S2 330 aa11.71□□□□□ -0.53
CXCL12-205ENST00000395794 CYP2R1Q6VVX0 501 aa11.71□□□□□ -0.53
CXCL12-205ENST00000395794 PTCHD4Q6ZW05 846 aa11.71□□□□□ -0.53
CXCL12-205ENST00000395794 VASH1Q7L8A9 365 aaPredicted RBP11.71□□□□□ -0.53
CXCL12-205ENST00000395794 ZSCAN2Q7Z7L9 614 aaPredicted RBP11.71□□□□□ -0.53
CXCL12-205ENST00000395794 PEG10Q86TG7 708 aaKnown RBP11.71□□□□□ -0.53
CXCL12-205ENST00000395794 ARHGAP24Q8N264 748 aa11.71□□□□□ -0.53
CXCL12-205ENST00000395794 GJC3Q8NFK1 279 aa11.71□□□□□ -0.53
CXCL12-205ENST00000395794 OR1F12Q8NHA8 337 aa11.71□□□□□ -0.53
CXCL12-205ENST00000395794 SPATA3Q8NHX4 192 aa11.71□□□□□ -0.53
CXCL12-205ENST00000395794 C1orf159Q96HA4 380 aa11.71□□□□□ -0.53
CXCL12-205ENST00000395794 GPA33Q99795 319 aa11.71□□□□□ -0.53
CXCL12-205ENST00000395794 CDADC1Q9BWV3 514 aa11.71□□□□□ -0.53
CXCL12-205ENST00000395794 SRA1Q9HD15 236 aaKnown RBP11.71□□□□□ -0.53
CXCL12-205ENST00000395794 TREM2Q9NZC2 230 aa11.71□□□□□ -0.53
CXCL12-205ENST00000395794 ACTR3BQ9P1U1 418 aa11.71□□□□□ -0.53
CXCL12-205ENST00000395794 TNFRSF11BO00300 401 aa11.7□□□□□ -0.54
CXCL12-205ENST00000395794 ARPC3O15145 178 aa11.7□□□□□ -0.54
CXCL12-205ENST00000395794 PHF1O43189 567 aaPredicted RBP11.7□□□□□ -0.54
CXCL12-205ENST00000395794 IDH3BO43837 385 aa11.7□□□□□ -0.54
CXCL12-205ENST00000395794 RGS6P49758 472 aa11.7□□□□□ -0.54
CXCL12-205ENST00000395794 FXYD6P3P58550 94 aa11.7□□□□□ -0.54
CXCL12-205ENST00000395794 TSPAN31Q12999 210 aa11.7□□□□□ -0.54
CXCL12-205ENST00000395794 KCNMB1Q16558 191 aa11.7□□□□□ -0.54
CXCL12-205ENST00000395794 SLC36A3Q495N2 470 aa11.7□□□□□ -0.54
CXCL12-205ENST00000395794 RPL13AP3Q6NVV1 102 aa11.7□□□□□ -0.54
CXCL12-205ENST00000395794 FITM2Q8N6M3 262 aa11.7□□□□□ -0.54
CXCL12-205ENST00000395794 CCDC197Q8NCU1 140 aa11.7□□□□□ -0.54
CXCL12-205ENST00000395794 OR52L1Q8NGH7 329 aa11.7□□□□□ -0.54
CXCL12-205ENST00000395794 OR5L1Q8NGL2 311 aa11.7□□□□□ -0.54
CXCL12-205ENST00000395794 OR51F2Q8NH61 342 aa11.7□□□□□ -0.54
CXCL12-205ENST00000395794 CCL17Q92583 94 aa11.7□□□□□ -0.54
CXCL12-205ENST00000395794 GTF3AQ92664 365 aaKnown RBP11.7□□□□□ -0.54
CXCL12-205ENST00000395794 POP5Q969H6 163 aaKnown RBP11.7□□□□□ -0.54
CXCL12-205ENST00000395794 RAB39BQ96DA2 213 aa11.7□□□□□ -0.54
CXCL12-205ENST00000395794 SAMD8Q96LT4 415 aa11.7□□□□□ -0.54
CXCL12-205ENST00000395794 DCLRE1CQ96SD1 692 aaKnown RBP11.7□□□□□ -0.54
CXCL12-205ENST00000395794 NMNAT3Q96T66 252 aa11.7□□□□□ -0.54
CXCL12-205ENST00000395794 RACGAP1Q9H0H5 632 aa11.7□□□□□ -0.54
CXCL12-205ENST00000395794 MUC13Q9H3R2 512 aa11.7□□□□□ -0.54
CXCL12-205ENST00000395794 OR6C6A6NF89 314 aa11.69□□□□□ -0.54
CXCL12-205ENST00000395794 ZSCAN5BA6NJL1 495 aa11.69□□□□□ -0.54
CXCL12-205ENST00000395794 FAM107AO95990 144 aa11.69□□□□□ -0.54
CXCL12-205ENST00000395794 HLA-DQA2P01906 255 aa11.69□□□□□ -0.54
CXCL12-205ENST00000395794 MSMBP08118 114 aa11.69□□□□□ -0.54
CXCL12-205ENST00000395794 GAAP10253 952 aa11.69□□□□□ -0.54
CXCL12-205ENST00000395794 HIST1H1CP16403 213 aaKnown RBP11.69□□□□□ -0.54
CXCL12-205ENST00000395794 CALB2P22676 271 aa11.69□□□□□ -0.54
CXCL12-205ENST00000395794 GSSP48637 474 aa11.69□□□□□ -0.54
CXCL12-205ENST00000395794 TNFAIP6P98066 277 aaPredicted RBP11.69□□□□□ -0.54
CXCL12-205ENST00000395794 PSG7Q13046 419 aa11.69□□□□□ -0.54
CXCL12-205ENST00000395794 AVPI1Q5T686 147 aa11.69□□□□□ -0.54
CXCL12-205ENST00000395794 DHFR2Q86XF0 187 aa11.69□□□□□ -0.54
CXCL12-205ENST00000395794 OR2AJ1Q8NGZ0 328 aa11.69□□□□□ -0.54
CXCL12-205ENST00000395794 OR4K13Q8NH42 304 aa11.69□□□□□ -0.54
CXCL12-205ENST00000395794 PTP4A1Q93096 173 aa11.69□□□□□ -0.54
CXCL12-205ENST00000395794 TMEM186Q96B77 213 aa11.69□□□□□ -0.54
CXCL12-205ENST00000395794 CMBLQ96DG6 245 aa11.69□□□□□ -0.54
CXCL12-205ENST00000395794 TSSK2Q96PF2 358 aa11.69□□□□□ -0.54
CXCL12-205ENST00000395794 HDHD2Q9H0R4 259 aa11.69□□□□□ -0.54
CXCL12-205ENST00000395794 LPAR2Q9HBW0 351 aa11.69□□□□□ -0.54
CXCL12-205ENST00000395794 MSL2Q9HCI7 577 aa11.69□□□□□ -0.54
CXCL12-205ENST00000395794 ATPIF1Q9UII2 106 aa11.69□□□□□ -0.54
CXCL12-205ENST00000395794 B9D1Q9UPM9 204 aa11.69□□□□□ -0.54
CXCL12-205ENST00000395794 J3QW42 95 aa11.68□□□□□ -0.54
CXCL12-205ENST00000395794 WNT9BO14905 357 aa11.68□□□□□ -0.54
CXCL12-205ENST00000395794 RER1O15258 196 aa11.68□□□□□ -0.54
CXCL12-205ENST00000395794 SURF4O15260 269 aa11.68□□□□□ -0.54
CXCL12-205ENST00000395794 CCNB2O95067 398 aa11.68□□□□□ -0.54
CXCL12-205ENST00000395794 ADH4P08319 380 aa11.68□□□□□ -0.54
CXCL12-205ENST00000395794 TNFRSF1AP19438 455 aa11.68□□□□□ -0.54
CXCL12-205ENST00000395794 SCGB2A2Q13296 93 aa11.68□□□□□ -0.54
CXCL12-205ENST00000395794 FAM98BQ52LJ0 330 aaKnown RBP11.68□□□□□ -0.54
CXCL12-205ENST00000395794 CCDC92Q53HC0 331 aaPredicted RBP11.68□□□□□ -0.54
CXCL12-205ENST00000395794 OTPQ5XKR4 325 aa11.68□□□□□ -0.54
CXCL12-205ENST00000395794 ACSM5Q6NUN0 579 aa11.68□□□□□ -0.54
CXCL12-205ENST00000395794 PGBD2Q6P3X8 592 aa11.68□□□□□ -0.54
CXCL12-205ENST00000395794 SHQ1Q6PI26 577 aaKnown RBP11.68□□□□□ -0.54
CXCL12-205ENST00000395794 ZNF620Q6ZNG0 422 aa11.68□□□□□ -0.54
CXCL12-205ENST00000395794 RINLQ6ZS11 566 aa11.68□□□□□ -0.54
CXCL12-205ENST00000395794 OR6V1Q8N148 313 aa11.68□□□□□ -0.54
CXCL12-205ENST00000395794 TEX29Q8N6K0 151 aa11.68□□□□□ -0.54
CXCL12-205ENST00000395794 OR2Z1Q8NG97 314 aa11.68□□□□□ -0.54
CXCL12-205ENST00000395794 OR52E2Q8NGJ4 325 aa11.68□□□□□ -0.54
CXCL12-205ENST00000395794 SLC7A6Q92536 515 aa11.68□□□□□ -0.54
CXCL12-205ENST00000395794 APOBEC3DQ96AK3 386 aaPredicted RBP11.68□□□□□ -0.54
CXCL12-205ENST00000395794 LRGUKQ96M69 825 aa11.68□□□□□ -0.54
CXCL12-205ENST00000395794 TRIM15Q9C019 465 aa11.68□□□□□ -0.54
CXCL12-205ENST00000395794 MAGIXQ9H6Y5 334 aa11.68□□□□□ -0.54
CXCL12-205ENST00000395794 ZNF665Q9H7R5 613 aa11.68□□□□□ -0.54
CXCL12-205ENST00000395794 RPRD1BQ9NQG5 326 aaKnown RBP11.68□□□□□ -0.54
CXCL12-205ENST00000395794 HIF1ANQ9NWT6 349 aa11.68□□□□□ -0.54
CXCL12-205ENST00000395794 KLHL21Q9UJP4 597 aa11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 61.5 ms