RNA–Protein interactions for RNA: ENST00000394611.6

RTN4-206, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 4,161 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-206ENST00000394611 CLEC3AO75596 197 aa7.99□□□□□ -1.13
RTN4-206ENST00000394611 P2RY2P41231 377 aa7.99□□□□□ -1.13
RTN4-206ENST00000394611 F2RL1P55085 397 aa7.99□□□□□ -1.13
RTN4-206ENST00000394611 IRF4Q15306 451 aa7.99□□□□□ -1.13
RTN4-206ENST00000394611 C1QL3Q5VWW1 255 aa7.99□□□□□ -1.13
RTN4-206ENST00000394611 C19orf48Q6RUI8 117 aa7.99□□□□□ -1.13
RTN4-206ENST00000394611 UBE3DQ7Z6J8 389 aa7.99□□□□□ -1.13
RTN4-206ENST00000394611 BAP18Q8IXM2 172 aa7.99□□□□□ -1.13
RTN4-206ENST00000394611 TMEM123Q8N131 208 aa7.99□□□□□ -1.13
RTN4-206ENST00000394611 OR51F2Q8NH61 342 aa7.99□□□□□ -1.13
RTN4-206ENST00000394611 ZNF417Q8TAU3 575 aa7.99□□□□□ -1.13
RTN4-206ENST00000394611 ADAMTS18Q8TE60 1221 aa7.99□□□□□ -1.13
RTN4-206ENST00000394611 REEP6Q96HR9 211 aa7.99□□□□□ -1.13
RTN4-206ENST00000394611 RAB33BQ9H082 229 aa7.99□□□□□ -1.13
RTN4-206ENST00000394611 CTSFQ9UBX1 484 aa7.99□□□□□ -1.13
RTN4-206ENST00000394611 DNASE2O00115 360 aaPredicted RBP7.99□□□□□ -1.13
RTN4-206ENST00000394611 SYT7O43581 403 aa7.99□□□□□ -1.13
RTN4-206ENST00000394611 IFNA21P01568 189 aa7.99□□□□□ -1.13
RTN4-206ENST00000394611 CASRP41180 1078 aa7.99□□□□□ -1.13
RTN4-206ENST00000394611 NKX6-1P78426 367 aaPredicted RBP7.99□□□□□ -1.13
RTN4-206ENST00000394611 RPL7L1Q6DKI1 246 aaKnown RBP7.99□□□□□ -1.13
RTN4-206ENST00000394611 EIF5AL1Q6IS14 154 aaKnown RBP7.99□□□□□ -1.13
RTN4-206ENST00000394611 PRR18Q8N4B5 295 aa7.99□□□□□ -1.13
RTN4-206ENST00000394611 ZNF283Q8N7M2 679 aa7.99□□□□□ -1.13
RTN4-206ENST00000394611 OR5H2Q8NGV7 314 aa7.99□□□□□ -1.13
RTN4-206ENST00000394611 RLN3Q8WXF3 142 aa7.99□□□□□ -1.13
RTN4-206ENST00000394611 WDR13Q9H1Z4 485 aa7.99□□□□□ -1.13
RTN4-206ENST00000394611 TAF9BQ9HBM6 251 aa7.99□□□□□ -1.13
RTN4-206ENST00000394611 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP7.99□□□□□ -1.132e-7■■■□□ 17.5
RTN4-206ENST00000394611 KLHDC2Q9Y2U9 406 aa7.99□□□□□ -1.13
RTN4-206ENST00000394611 DENND4CQ5VZ89 1909 aa7.99□□□□□ -1.13
RTN4-206ENST00000394611 PLXND1Q9Y4D7 1925 aa7.99□□□□□ -1.13
RTN4-206ENST00000394611 IGHV3-64DA0A0J9YX35 117 aa7.98□□□□□ -1.13
RTN4-206ENST00000394611 NPIPA5E9PKD4 350 aa7.98□□□□□ -1.13
RTN4-206ENST00000394611 H0YGG7 62 aa7.98□□□□□ -1.13
RTN4-206ENST00000394611 PIN1P1O15428 100 aa7.98□□□□□ -1.13
RTN4-206ENST00000394611 ZNHIT1O43257 154 aa7.98□□□□□ -1.13
RTN4-206ENST00000394611 TGM6O95932 706 aa7.98□□□□□ -1.13
RTN4-206ENST00000394611 THY1P04216 161 aa7.98□□□□□ -1.13
RTN4-206ENST00000394611 NID1P14543 1247 aa7.98□□□□□ -1.13
RTN4-206ENST00000394611 MGMTP16455 207 aa7.98□□□□□ -1.13
RTN4-206ENST00000394611 SFTPDP35247 375 aa7.98□□□□□ -1.13
RTN4-206ENST00000394611 OPRM1P35372 400 aa7.98□□□□□ -1.13
RTN4-206ENST00000394611 OR1D4P47884 311 aa7.98□□□□□ -1.13
RTN4-206ENST00000394611 PCBP4P57723 403 aaKnown RBP7.98□□□□□ -1.13
RTN4-206ENST00000394611 ARF3P61204 181 aaPredicted RBP7.98□□□□□ -1.13
RTN4-206ENST00000394611 PPIAP62937 165 aaKnown RBP7.98□□□□□ -1.13
RTN4-206ENST00000394611 BTG2P78543 158 aa7.98□□□□□ -1.13
RTN4-206ENST00000394611 SGCAQ16586 387 aa7.98□□□□□ -1.13
RTN4-206ENST00000394611 C11orf87Q6NUJ2 197 aa7.98□□□□□ -1.13
RTN4-206ENST00000394611 USP53Q70EK8 1073 aa7.98□□□□□ -1.13
RTN4-206ENST00000394611 RTL10Q7L3V2 364 aa7.98□□□□□ -1.13
RTN4-206ENST00000394611 PXKQ7Z7A4 578 aa7.98□□□□□ -1.13
RTN4-206ENST00000394611 CDRT4Q8N9R6 151 aa7.98□□□□□ -1.13
RTN4-206ENST00000394611 FGF13Q92913 245 aa7.98□□□□□ -1.13
RTN4-206ENST00000394611 HAVCR1Q96D42 359 aa7.98□□□□□ -1.13
RTN4-206ENST00000394611 WWTR1Q9GZV5 400 aa7.98□□□□□ -1.13
RTN4-206ENST00000394611 SHARPINQ9H0F6 387 aa7.98□□□□□ -1.13
RTN4-206ENST00000394611 NPIPA1Q9UND3 350 aa7.98□□□□□ -1.13
RTN4-206ENST00000394611 CYP8B1Q9UNU6 501 aa7.98□□□□□ -1.13
RTN4-206ENST00000394611 C14orf166Q9Y224 244 aaKnown RBP7.98□□□□□ -1.13
RTN4-206ENST00000394611 H3BP45 60 aa7.98□□□□□ -1.13
RTN4-206ENST00000394611 KLF8O95600 359 aaPredicted RBP7.98□□□□□ -1.13
RTN4-206ENST00000394611 PTAFRP25105 342 aa7.98□□□□□ -1.13
RTN4-206ENST00000394611 TACR3P29371 465 aa7.98□□□□□ -1.13
RTN4-206ENST00000394611 GJA4P35212 333 aa7.98□□□□□ -1.13
RTN4-206ENST00000394611 THBS2P35442 1172 aa7.98□□□□□ -1.13
RTN4-206ENST00000394611 CDKN2AP42771 156 aaKnown RBP7.98□□□□□ -1.13
RTN4-206ENST00000394611 RSU1Q15404 277 aa7.98□□□□□ -1.13
RTN4-206ENST00000394611 RSPO4Q2I0M5 234 aaPredicted RBP7.98□□□□□ -1.13
RTN4-206ENST00000394611 STPG1Q5TH74 334 aa7.98□□□□□ -1.13
RTN4-206ENST00000394611 ZNF425Q6IV72 752 aa7.98□□□□□ -1.13
RTN4-206ENST00000394611 ACOT7LQ6ZUV0 252 aa7.98□□□□□ -1.13
RTN4-206ENST00000394611 LINC00469Q8N7U9 141 aa7.98□□□□□ -1.13
RTN4-206ENST00000394611 CAMKVQ8NCB2 501 aa7.98□□□□□ -1.13
RTN4-206ENST00000394611 ADAD2Q8NCV1 583 aaKnown RBP7.98□□□□□ -1.13
RTN4-206ENST00000394611 INTS12Q96CB8 462 aaKnown RBP7.98□□□□□ -1.13
RTN4-206ENST00000394611 MOGAT1Q96PD6 335 aa7.98□□□□□ -1.13
RTN4-206ENST00000394611 CPEB1Q9BZB8 566 aaKnown RBP7.98□□□□□ -1.13
RTN4-206ENST00000394611 UBE2ZQ9H832 354 aaPredicted RBP7.98□□□□□ -1.13
RTN4-206ENST00000394611 TUBG2Q9NRH3 451 aa7.98□□□□□ -1.13
RTN4-206ENST00000394611 PIPOXQ9P0Z9 390 aa7.98□□□□□ -1.13
RTN4-206ENST00000394611 SERGEFQ9UGK8 458 aa7.98□□□□□ -1.13
RTN4-206ENST00000394611 NDRG3Q9UGV2 375 aa7.98□□□□□ -1.13
RTN4-206ENST00000394611 UMAD1C9J7I0 102 aa7.98□□□□□ -1.13
RTN4-206ENST00000394611 K7EPK0 472 aa7.98□□□□□ -1.13
RTN4-206ENST00000394611 CT62P0C5K7 136 aa7.98□□□□□ -1.13
RTN4-206ENST00000394611 BMP5P22003 454 aa7.98□□□□□ -1.13
RTN4-206ENST00000394611 ALDH3B1P43353 468 aa7.98□□□□□ -1.13
RTN4-206ENST00000394611 PPP1CAP62136 330 aa7.98□□□□□ -1.13
RTN4-206ENST00000394611 TFF2Q03403 129 aa7.98□□□□□ -1.13
RTN4-206ENST00000394611 RUNX2Q13950 521 aa7.98□□□□□ -1.13
RTN4-206ENST00000394611 FAM53BQ14153 422 aa7.98□□□□□ -1.13
RTN4-206ENST00000394611 HIST2H3PS2Q5TEC6 136 aa7.98□□□□□ -1.13
RTN4-206ENST00000394611 OR2A2Q6IF42 318 aa7.98□□□□□ -1.13
RTN4-206ENST00000394611 TMEM182Q6ZP80 229 aaPredicted RBP7.98□□□□□ -1.13
RTN4-206ENST00000394611 HTR3DQ70Z44 454 aa7.98□□□□□ -1.13
RTN4-206ENST00000394611 CAMKMTQ7Z624 323 aa7.98□□□□□ -1.13
RTN4-206ENST00000394611 FAM71E2Q8N5Q1 922 aa7.98□□□□□ -1.13
RTN4-206ENST00000394611 OVCA2Q8WZ82 227 aa7.98□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms