RNA–Protein interactions for RNA: ENST00000374876.4

CCDC40-202, Transcript of coiled-coil domain containing 40, humanhuman

TSL 1 (best) BASIC

Gene CCDC40, Length 2,010 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-202ENST00000374876 KRT77Q7Z794 578 aa13.86□□□□□ -0.19
CCDC40-202ENST00000374876 KDM8Q8N371 416 aa13.86□□□□□ -0.19
CCDC40-202ENST00000374876 C15orf40Q8WUR7 153 aa13.86□□□□□ -0.19
CCDC40-202ENST00000374876 DACT3Q96B18 629 aaPredicted RBP13.86□□□□□ -0.19
CCDC40-202ENST00000374876 GON7Q9BXV9 100 aa13.86□□□□□ -0.19
CCDC40-202ENST00000374876 DEFB126Q9BYW3 111 aa13.86□□□□□ -0.19
CCDC40-202ENST00000374876 CDCP1Q9H5V8 836 aa13.86□□□□□ -0.19
CCDC40-202ENST00000374876 PLA2G3Q9NZ20 509 aa13.86□□□□□ -0.19
CCDC40-202ENST00000374876 ZNF222Q9UK12 451 aa13.86□□□□□ -0.19
CCDC40-202ENST00000374876 CENPBD1B2RD01 187 aa13.85□□□□□ -0.19
CCDC40-202ENST00000374876 FTCDNL1E5RQL4 147 aa13.85□□□□□ -0.19
CCDC40-202ENST00000374876 ATXN7O15265 892 aaPredicted RBP13.85□□□□□ -0.19
CCDC40-202ENST00000374876 IL11P20809 199 aa13.85□□□□□ -0.19
CCDC40-202ENST00000374876 APOBEC1P41238 236 aaKnown RBP13.85□□□□□ -0.19
CCDC40-202ENST00000374876 CCR9P51686 369 aa13.85□□□□□ -0.19
CCDC40-202ENST00000374876 ROM1Q03395 351 aa13.85□□□□□ -0.19
CCDC40-202ENST00000374876 PUDPQ08623 228 aa13.85□□□□□ -0.19
CCDC40-202ENST00000374876 EIF2B1Q14232 305 aaKnown RBP13.85□□□□□ -0.19
CCDC40-202ENST00000374876 MFSD13AQ14CX5 517 aa13.85□□□□□ -0.19
CCDC40-202ENST00000374876 CD276Q5ZPR3 534 aa13.85□□□□□ -0.19
CCDC40-202ENST00000374876 JMJD6Q6NYC1 403 aaPredicted RBP13.85□□□□□ -0.19
CCDC40-202ENST00000374876 OR6S1Q8NH40 331 aa13.85□□□□□ -0.19
CCDC40-202ENST00000374876 OR56B4Q8NH76 319 aa13.85□□□□□ -0.19
CCDC40-202ENST00000374876 LILRB4Q8NHJ6 448 aa13.85□□□□□ -0.19
CCDC40-202ENST00000374876 GRPEL2Q8TAA5 225 aa13.85□□□□□ -0.19
CCDC40-202ENST00000374876 RNF128Q8TEB7 428 aa13.85□□□□□ -0.19
CCDC40-202ENST00000374876 GIMAP1Q8WWP7 306 aa13.85□□□□□ -0.19
CCDC40-202ENST00000374876 MCHR2Q969V1 340 aa13.85□□□□□ -0.19
CCDC40-202ENST00000374876 WBP1Q96G27 269 aa13.85□□□□□ -0.19
CCDC40-202ENST00000374876 HYLS1Q96M11 299 aa13.85□□□□□ -0.19
CCDC40-202ENST00000374876 ZNF275Q9NSD4 429 aaPredicted RBP13.85□□□□□ -0.19
CCDC40-202ENST00000374876 STEAP1Q9UHE8 339 aa13.85□□□□□ -0.19
CCDC40-202ENST00000374876 TUBD1Q9UJT1 453 aa13.85□□□□□ -0.19
CCDC40-202ENST00000374876 A6NIZ1 184 aa13.85□□□□□ -0.19
CCDC40-202ENST00000374876 HLA-DOBP13765 273 aa13.85□□□□□ -0.19
CCDC40-202ENST00000374876 SUMO3P55854 103 aaPredicted RBP13.85□□□□□ -0.19
CCDC40-202ENST00000374876 RAP1BP61224 184 aa13.85□□□□□ -0.19
CCDC40-202ENST00000374876 RAP1AP62834 184 aa13.85□□□□□ -0.19
CCDC40-202ENST00000374876 OR7A5Q15622 319 aa13.85□□□□□ -0.19
CCDC40-202ENST00000374876 GSG1Q2KHT4 349 aa13.85□□□□□ -0.19
CCDC40-202ENST00000374876 H3F3CQ6NXT2 135 aa13.85□□□□□ -0.19
CCDC40-202ENST00000374876 ZNF454Q8N9F8 522 aa13.85□□□□□ -0.19
CCDC40-202ENST00000374876 SLC39A7Q92504 469 aa13.85□□□□□ -0.19
CCDC40-202ENST00000374876 C20orf85Q9H1P6 137 aa13.85□□□□□ -0.19
CCDC40-202ENST00000374876 HRASLSQ9HDD0 168 aa13.85□□□□□ -0.19
CCDC40-202ENST00000374876 MED11Q9P086 117 aa13.85□□□□□ -0.19
CCDC40-202ENST00000374876 ING4Q9UNL4 249 aa13.85□□□□□ -0.19
CCDC40-202ENST00000374876 VDAC3Q9Y277 283 aa13.85□□□□□ -0.19
CCDC40-202ENST00000374876 COA3Q9Y2R0 106 aaPredicted RBP13.85□□□□□ -0.19
CCDC40-202ENST00000374876 TNFSF12-TNFSF13A0A0A6YY99 330 aa13.84□□□□□ -0.19
CCDC40-202ENST00000374876 NAP1L6A6NFF2 107 aa13.84□□□□□ -0.19
CCDC40-202ENST00000374876 NPIPA5E9PKD4 350 aa13.84□□□□□ -0.19
CCDC40-202ENST00000374876 ACOT7O00154 380 aa13.84□□□□□ -0.19
CCDC40-202ENST00000374876 FABP7O15540 132 aa13.84□□□□□ -0.19
CCDC40-202ENST00000374876 PRB1P04280 392 aa13.84□□□□□ -0.19
CCDC40-202ENST00000374876 RIDAP52758 137 aaKnown RBP13.84□□□□□ -0.19
CCDC40-202ENST00000374876 SCAND1P57086 179 aa13.84□□□□□ -0.19
CCDC40-202ENST00000374876 TAS2R20P59543 309 aa13.84□□□□□ -0.19
CCDC40-202ENST00000374876 TEX30Q5JUR7 227 aa13.84□□□□□ -0.19
CCDC40-202ENST00000374876 ACER2Q5QJU3 275 aa13.84□□□□□ -0.19
CCDC40-202ENST00000374876 SFRP4Q6FHJ7 346 aaPredicted RBP13.84□□□□□ -0.19
CCDC40-202ENST00000374876 OR7E24Q6IFN5 339 aa13.84□□□□□ -0.19
CCDC40-202ENST00000374876 RPS19BP1Q86WX3 136 aaKnown RBP13.84□□□□□ -0.19
CCDC40-202ENST00000374876 OR11H7Q8NGC8 314 aa13.84□□□□□ -0.19
CCDC40-202ENST00000374876 OR5L2Q8NGL0 311 aa13.84□□□□□ -0.19
CCDC40-202ENST00000374876 MFSD8Q8NHS3 518 aa13.84□□□□□ -0.19
CCDC40-202ENST00000374876 DEDD2Q8WXF8 326 aa13.84□□□□□ -0.19
CCDC40-202ENST00000374876 HGDQ93099 445 aa13.84□□□□□ -0.19
CCDC40-202ENST00000374876 DDIT4LQ96D03 193 aa13.84□□□□□ -0.19
CCDC40-202ENST00000374876 NPAS1Q99742 590 aa13.84□□□□□ -0.19
CCDC40-202ENST00000374876 EMC7Q9NPA0 242 aa13.84□□□□□ -0.19
CCDC40-202ENST00000374876 NKIRAS2Q9NYR9 191 aa13.84□□□□□ -0.19
CCDC40-202ENST00000374876 KLRF1Q9NZS2 232 aa13.84□□□□□ -0.19
CCDC40-202ENST00000374876 KLK11Q9UBX7 282 aa13.84□□□□□ -0.19
CCDC40-202ENST00000374876 NPIPA1Q9UND3 350 aa13.84□□□□□ -0.19
CCDC40-202ENST00000374876 CSAG2Q9Y5P2 127 aa13.84□□□□□ -0.19
CCDC40-202ENST00000374876 PCNX3Q9H6A9 2034 aa13.84□□□□□ -0.19
CCDC40-202ENST00000374876 ALPK2Q86TB3 2170 aa13.83□□□□□ -0.19
CCDC40-202ENST00000374876 TMEM200CA6NKL6 621 aa13.83□□□□□ -0.2
CCDC40-202ENST00000374876 H0YC42 278 aa13.83□□□□□ -0.2
CCDC40-202ENST00000374876 ANXA3P12429 323 aa13.83□□□□□ -0.2
CCDC40-202ENST00000374876 MNDAP41218 407 aa13.83□□□□□ -0.2
CCDC40-202ENST00000374876 DAP3P51398 398 aaKnown RBP13.83□□□□□ -0.2
CCDC40-202ENST00000374876 ABHD17BQ5VST6 288 aa13.83□□□□□ -0.2
CCDC40-202ENST00000374876 DNM1P34Q6PK57 102 aa13.83□□□□□ -0.2
CCDC40-202ENST00000374876 ARSKQ6UWY0 536 aa13.83□□□□□ -0.2
CCDC40-202ENST00000374876 H1FNTQ75WM6 255 aaPredicted RBP13.83□□□□□ -0.2
CCDC40-202ENST00000374876 BEST3Q8N1M1 668 aa13.83□□□□□ -0.2
CCDC40-202ENST00000374876 ARL5BQ96KC2 179 aa13.83□□□□□ -0.2
CCDC40-202ENST00000374876 ABHD6Q9BV23 337 aa13.83□□□□□ -0.2
CCDC40-202ENST00000374876 SLC22A13Q9Y226 551 aa13.83□□□□□ -0.2
CCDC40-202ENST00000374876 HSPB11Q9Y547 144 aa13.83□□□□□ -0.2
CCDC40-202ENST00000374876 CHD6Q8TD26 2715 aa13.83□□□□□ -0.2
CCDC40-202ENST00000374876 ARPC4-TTLL3A0A0A6YYG9 625 aa13.83□□□□□ -0.2
CCDC40-202ENST00000374876 MS4A18H0YCH9 400 aa13.83□□□□□ -0.2
CCDC40-202ENST00000374876 SSNA1O43805 119 aa13.83□□□□□ -0.2
CCDC40-202ENST00000374876 GMDSO60547 372 aa13.83□□□□□ -0.2
CCDC40-202ENST00000374876 ZFAND5O76080 213 aa13.83□□□□□ -0.2
CCDC40-202ENST00000374876 WDPCPO95876 746 aa13.83□□□□□ -0.2
CCDC40-202ENST00000374876 PNPP00491 289 aa13.83□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 59.3 ms