RNA–Protein interactions for RNA: ENST00000374274.7

SNX12-202, Transcript of sorting nexin 12, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SNX12, Length 2,376 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX12-202ENST00000374274 H0YIZ8 118 aa12.08□□□□□ -0.48
SNX12-202ENST00000374274 SMAD9O15198 467 aaKnown RBP12.08□□□□□ -0.48
SNX12-202ENST00000374274 GPR37O15354 613 aa12.08□□□□□ -0.48
SNX12-202ENST00000374274 CSTBP04080 98 aaKnown RBP12.08□□□□□ -0.48
SNX12-202ENST00000374274 ERCC1P07992 297 aaPredicted RBP12.08□□□□□ -0.48
SNX12-202ENST00000374274 ITGA3P26006 1051 aa12.08□□□□□ -0.48
SNX12-202ENST00000374274 CDKN2AP42771 156 aaKnown RBP12.08□□□□□ -0.48
SNX12-202ENST00000374274 KIR3DL2P43630 455 aa12.08□□□□□ -0.48
SNX12-202ENST00000374274 UCP2P55851 309 aa12.08□□□□□ -0.48
SNX12-202ENST00000374274 TDGQ13569 410 aa12.08□□□□□ -0.48
SNX12-202ENST00000374274 TRMT12Q53H54 448 aaKnown RBP12.08□□□□□ -0.48
SNX12-202ENST00000374274 NSUN5P2Q63ZY6 315 aa12.08□□□□□ -0.48
SNX12-202ENST00000374274 KCTD9Q7L273 389 aa12.08□□□□□ -0.48
SNX12-202ENST00000374274 OR56B1Q8NGI3 324 aa12.08□□□□□ -0.48
SNX12-202ENST00000374274 NUBPLQ8TB37 319 aa12.08□□□□□ -0.48
SNX12-202ENST00000374274 LIPHQ8WWY8 451 aa12.08□□□□□ -0.48
SNX12-202ENST00000374274 MYLIPQ8WY64 445 aa12.08□□□□□ -0.48
SNX12-202ENST00000374274 ZNF775Q96BV0 537 aaPredicted RBP12.08□□□□□ -0.48
SNX12-202ENST00000374274 FBXO17Q96EF6 278 aa12.08□□□□□ -0.48
SNX12-202ENST00000374274 SERINC2Q96SA4 455 aa12.08□□□□□ -0.48
SNX12-202ENST00000374274 S100A13Q99584 98 aa12.08□□□□□ -0.48
SNX12-202ENST00000374274 WDR77Q9BQA1 342 aaPredicted RBP12.08□□□□□ -0.48
SNX12-202ENST00000374274 RGCCQ9H4X1 137 aa12.08□□□□□ -0.48
SNX12-202ENST00000374274 TAF9BQ9HBM6 251 aa12.08□□□□□ -0.48
SNX12-202ENST00000374274 PLGP00747 810 aaPredicted RBP12.07□□□□□ -0.48
SNX12-202ENST00000374274 GAPDHP04406 335 aaKnown RBP12.07□□□□□ -0.48
SNX12-202ENST00000374274 VAMP1P23763 118 aa12.07□□□□□ -0.48
SNX12-202ENST00000374274 CMPK1P30085 196 aa12.07□□□□□ -0.48
SNX12-202ENST00000374274 PRRT3Q5FWE3 981 aa12.07□□□□□ -0.48
SNX12-202ENST00000374274 C9orf152Q5JTZ5 239 aa12.07□□□□□ -0.48
SNX12-202ENST00000374274 KRBOX4Q5JUW0 171 aa12.07□□□□□ -0.48
SNX12-202ENST00000374274 BEND4Q6ZU67 534 aa12.07□□□□□ -0.48
SNX12-202ENST00000374274 GRASPQ7Z6J2 395 aaPredicted RBP12.07□□□□□ -0.48
SNX12-202ENST00000374274 PNLDC1Q8NA58 520 aaKnown RBP12.07□□□□□ -0.48
SNX12-202ENST00000374274 IER2Q9BTL4 223 aa12.07□□□□□ -0.48
SNX12-202ENST00000374274 CHST5Q9GZS9 411 aa12.07□□□□□ -0.48
SNX12-202ENST00000374274 ST6GALNAC1Q9NSC7 600 aaPredicted RBP12.07□□□□□ -0.48
SNX12-202ENST00000374274 PARPBPQ9NWS1 579 aa12.07□□□□□ -0.48
SNX12-202ENST00000374274 GFOD1Q9NXC2 390 aa12.07□□□□□ -0.48
SNX12-202ENST00000374274 TMEM184BQ9Y519 407 aaPredicted RBP12.07□□□□□ -0.48
SNX12-202ENST00000374274 WNT6Q9Y6F9 365 aa12.07□□□□□ -0.48
SNX12-202ENST00000374274 MYO7AQ13402 2215 aa12.07□□□□□ -0.48
SNX12-202ENST00000374274 C9JQL5 133 aa12.07□□□□□ -0.48
SNX12-202ENST00000374274 SCGNO76038 276 aa12.07□□□□□ -0.48
SNX12-202ENST00000374274 NKX2-2O95096 273 aa12.07□□□□□ -0.48
SNX12-202ENST00000374274 CST4P01036 141 aa12.07□□□□□ -0.48
SNX12-202ENST00000374274 IGFBP3P17936 291 aaPredicted RBP12.07□□□□□ -0.48
SNX12-202ENST00000374274 S100A2P29034 98 aa12.07□□□□□ -0.48
SNX12-202ENST00000374274 CCKBRP32239 447 aa12.07□□□□□ -0.48
SNX12-202ENST00000374274 ACTR1BP42025 376 aa12.07□□□□□ -0.48
SNX12-202ENST00000374274 RBP2P50120 134 aa12.07□□□□□ -0.48
SNX12-202ENST00000374274 RAB4BP61018 213 aa12.07□□□□□ -0.48
SNX12-202ENST00000374274 SRSF5Q13243 272 aaKnown RBP12.07□□□□□ -0.48
SNX12-202ENST00000374274 MLF2Q15773 248 aaPredicted RBP12.07□□□□□ -0.48
SNX12-202ENST00000374274 WDR38Q5JTN6 314 aa12.07□□□□□ -0.48
SNX12-202ENST00000374274 TMEM225Q6GV28 225 aa12.07□□□□□ -0.48
SNX12-202ENST00000374274 SSX9Q7RTT3 188 aa12.07□□□□□ -0.48
SNX12-202ENST00000374274 SPRED2Q7Z698 418 aa12.07□□□□□ -0.48
SNX12-202ENST00000374274 DTWD2Q8NBA8 298 aa12.07□□□□□ -0.48
SNX12-202ENST00000374274 RNASE11Q8TAA1 199 aaKnown RBP12.07□□□□□ -0.48
SNX12-202ENST00000374274 FAM174AQ8TBP5 190 aa12.07□□□□□ -0.48
SNX12-202ENST00000374274 CASTOR1Q8WTX7 329 aa12.07□□□□□ -0.48
SNX12-202ENST00000374274 NUDT16L1Q9BRJ7 211 aaKnown RBP12.07□□□□□ -0.48
SNX12-202ENST00000374274 C8orf33Q9H7E9 229 aaPredicted RBP12.07□□□□□ -0.48
SNX12-202ENST00000374274 HIF3AQ9Y2N7 669 aa12.07□□□□□ -0.48
SNX12-202ENST00000374274 C13orf42A0A1B0GVH6 325 aa12.06□□□□□ -0.48
SNX12-202ENST00000374274 A0A1W2PPH5 198 aa12.06□□□□□ -0.48
SNX12-202ENST00000374274 OR52A4PA6NMU1 304 aa12.06□□□□□ -0.48
SNX12-202ENST00000374274 CEACAM18A8MTB9 384 aa12.06□□□□□ -0.48
SNX12-202ENST00000374274 C5orf67F2Z3F1 127 aa12.06□□□□□ -0.48
SNX12-202ENST00000374274 NARSO43776 548 aaKnown RBP12.06□□□□□ -0.48
SNX12-202ENST00000374274 LRP3O75074 770 aa12.06□□□□□ -0.48
SNX12-202ENST00000374274 NME2P22392 152 aa12.06□□□□□ -0.48
SNX12-202ENST00000374274 TMEM128Q5BJH2 165 aa12.06□□□□□ -0.48
SNX12-202ENST00000374274 TMEM268Q5VZI3 342 aa12.06□□□□□ -0.48
SNX12-202ENST00000374274 KIRREL2Q6UWL6 708 aa12.06□□□□□ -0.48
SNX12-202ENST00000374274 INSM2Q96T92 566 aaPredicted RBP12.06□□□□□ -0.48
SNX12-202ENST00000374274 NUDT9Q9BW91 350 aa12.06□□□□□ -0.48
SNX12-202ENST00000374274 KCNK15Q9H427 330 aa12.06□□□□□ -0.48
SNX12-202ENST00000374274 HCFC2Q9Y5Z7 792 aa12.06□□□□□ -0.48
SNX12-202ENST00000374274 WDFY4Q6ZS81 3184 aa12.06□□□□□ -0.48
SNX12-202ENST00000374274 LOC390937A0A1W2PQ73 354 aa12.06□□□□□ -0.48
SNX12-202ENST00000374274 BCAT2O15382 392 aaPredicted RBP12.06□□□□□ -0.48
SNX12-202ENST00000374274 OIP5O43482 229 aa12.06□□□□□ -0.48
SNX12-202ENST00000374274 LIPCP11150 499 aa12.06□□□□□ -0.48
SNX12-202ENST00000374274 RIDAP52758 137 aaKnown RBP12.06□□□□□ -0.48
SNX12-202ENST00000374274 TAS2R60P59551 318 aa12.06□□□□□ -0.48
SNX12-202ENST00000374274 RPS15AP62244 130 aaKnown RBP12.06□□□□□ -0.48
SNX12-202ENST00000374274 ZNF260Q3ZCT1 412 aa12.06□□□□□ -0.48
SNX12-202ENST00000374274 PYY3Q5JQD4 70 aa12.06□□□□□ -0.48
SNX12-202ENST00000374274 C1orf100Q5SVJ3 147 aa12.06□□□□□ -0.48
SNX12-202ENST00000374274 ETV3LQ6ZN32 361 aa12.06□□□□□ -0.48
SNX12-202ENST00000374274 REC114Q7Z4M0 266 aa12.06□□□□□ -0.48
SNX12-202ENST00000374274 HOGA1Q86XE5 327 aa12.06□□□□□ -0.48
SNX12-202ENST00000374274 KDM8Q8N371 416 aa12.06□□□□□ -0.48
SNX12-202ENST00000374274 ARRDC3Q96B67 414 aa12.06□□□□□ -0.48
SNX12-202ENST00000374274 C14orf144Q96I85 54 aa12.06□□□□□ -0.48
SNX12-202ENST00000374274 LMF1Q96S06 567 aa12.06□□□□□ -0.48
SNX12-202ENST00000374274 FN3KRPQ9HA64 309 aa12.06□□□□□ -0.48
SNX12-202ENST00000374274 PDE7BQ9NP56 450 aa12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 74.9 ms