RNA–Protein interactions for RNA: ENST00000362455.1

RNU4-39P-201, Transcript of RNA, U4 small nuclear 39, pseudogene, humanhuman

BASIC

Gene RNU4-39P, Length 127 nt, Biotype snRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-39P-201ENST00000362455 CHMP5Q9NZZ3 219 aa4.29□□□□□ -1.72
RNU4-39P-201ENST00000362455 MRPS7Q9Y2R9 242 aaKnown RBP4.29□□□□□ -1.72
RNU4-39P-201ENST00000362455 BZW2Q9Y6E2 419 aaKnown RBP4.29□□□□□ -1.72
RNU4-39P-201ENST00000362455 JMJD1CQ15652 2540 aa4.29□□□□□ -1.72
RNU4-39P-201ENST00000362455 hCG_1818297A0A087WSY0 165 aa4.28□□□□□ -1.72
RNU4-39P-201ENST00000362455 IGHV1-45A0A0A0MS14 117 aa4.28□□□□□ -1.72
RNU4-39P-201ENST00000362455 TRAV17A0A0B4J275 112 aa4.28□□□□□ -1.72
RNU4-39P-201ENST00000362455 A0A1W2PPV9 198 aa4.28□□□□□ -1.72
RNU4-39P-201ENST00000362455 OR51F1A6NGY5 319 aa4.28□□□□□ -1.72
RNU4-39P-201ENST00000362455 SLC17A2O00624 439 aa4.28□□□□□ -1.72
RNU4-39P-201ENST00000362455 OR1I1O60431 355 aa4.28□□□□□ -1.72
RNU4-39P-201ENST00000362455 CST8O60676 142 aa4.28□□□□□ -1.72
RNU4-39P-201ENST00000362455 ZNF354AO60765 605 aaPredicted RBP4.28□□□□□ -1.72
RNU4-39P-201ENST00000362455 AP2A1O95782 977 aa4.28□□□□□ -1.72
RNU4-39P-201ENST00000362455 SERPINA7P05543 415 aa4.28□□□□□ -1.72
RNU4-39P-201ENST00000362455 H2AFZP0C0S5 128 aa4.28□□□□□ -1.72
RNU4-39P-201ENST00000362455 GATA1P15976 413 aaPredicted RBP4.28□□□□□ -1.72
RNU4-39P-201ENST00000362455 TPSB2P20231 275 aa4.28□□□□□ -1.72
RNU4-39P-201ENST00000362455 ATP5A1P25705 553 aaKnown RBP4.28□□□□□ -1.72
RNU4-39P-201ENST00000362455 PTBP1P26599 531 aaKnown RBP eCLIP4.28□□□□□ -1.72
RNU4-39P-201ENST00000362455 CCR7P32248 378 aa4.28□□□□□ -1.72
RNU4-39P-201ENST00000362455 SHMT2P34897 504 aa4.28□□□□□ -1.72
RNU4-39P-201ENST00000362455 PLA2G16P53816 162 aa4.28□□□□□ -1.72
RNU4-39P-201ENST00000362455 CSNK1G2P78368 415 aa4.28□□□□□ -1.72
RNU4-39P-201ENST00000362455 ARG2P78540 354 aa4.28□□□□□ -1.72
RNU4-39P-201ENST00000362455 CBX1P83916 185 aa4.28□□□□□ -1.72
RNU4-39P-201ENST00000362455 PAX2Q02962 417 aa4.28□□□□□ -1.72
RNU4-39P-201ENST00000362455 TFF3Q07654 80 aa4.28□□□□□ -1.72
RNU4-39P-201ENST00000362455 TPSAB1Q15661 275 aa4.28□□□□□ -1.72
RNU4-39P-201ENST00000362455 CCSMST1Q4G0I0 132 aa4.28□□□□□ -1.72
RNU4-39P-201ENST00000362455 HIGD2BQ4VC39 106 aa4.28□□□□□ -1.72
RNU4-39P-201ENST00000362455 EIPR1Q53HC9 387 aa4.28□□□□□ -1.72
RNU4-39P-201ENST00000362455 FAM120AOSQ5T036 256 aa4.28□□□□□ -1.72
RNU4-39P-201ENST00000362455 OR8G2PQ6IF36 304 aa4.28□□□□□ -1.72
RNU4-39P-201ENST00000362455 ACSM5Q6NUN0 579 aa4.28□□□□□ -1.72
RNU4-39P-201ENST00000362455 XKRXQ6PP77 449 aa4.28□□□□□ -1.72
RNU4-39P-201ENST00000362455 SASS6Q6UVJ0 657 aa4.28□□□□□ -1.72
RNU4-39P-201ENST00000362455 RGS9BPQ6ZS82 235 aa4.28□□□□□ -1.72
RNU4-39P-201ENST00000362455 H2AFVQ71UI9 128 aa4.28□□□□□ -1.72
RNU4-39P-201ENST00000362455 NDUFAF7Q7L592 441 aa4.28□□□□□ -1.72
RNU4-39P-201ENST00000362455 SNX20Q7Z614 316 aa4.28□□□□□ -1.72
RNU4-39P-201ENST00000362455 DOLPP1Q86YN1 238 aa4.28□□□□□ -1.72
RNU4-39P-201ENST00000362455 OR5K2Q8NHB8 316 aa4.28□□□□□ -1.72
RNU4-39P-201ENST00000362455 LKAAEAR1Q8TD35 194 aa4.28□□□□□ -1.72
RNU4-39P-201ENST00000362455 FAM222BQ8WU58 562 aa4.28□□□□□ -1.72
RNU4-39P-201ENST00000362455 CTNNBL1Q8WYA6 563 aaPredicted RBP4.28□□□□□ -1.72
RNU4-39P-201ENST00000362455 N4BP2L2Q92802 583 aaPredicted RBP4.28□□□□□ -1.72
RNU4-39P-201ENST00000362455 RPL3LQ92901 407 aaKnown RBP4.28□□□□□ -1.72
RNU4-39P-201ENST00000362455 DCUN1D1Q96GG9 259 aa4.28□□□□□ -1.72
RNU4-39P-201ENST00000362455 C1orf147Q96MC9 270 aaPredicted RBP4.28□□□□□ -1.72
RNU4-39P-201ENST00000362455 QKIQ96PU8 341 aaKnown RBP eCLIP4.28□□□□□ -1.72
RNU4-39P-201ENST00000362455 CHP1Q99653 195 aa4.28□□□□□ -1.72
RNU4-39P-201ENST00000362455 BPIFA3Q9BQP9 254 aa4.28□□□□□ -1.72
RNU4-39P-201ENST00000362455 ELOVL3Q9HB03 270 aa4.28□□□□□ -1.72
RNU4-39P-201ENST00000362455 MRM3Q9HC36 420 aaKnown RBP4.28□□□□□ -1.72
RNU4-39P-201ENST00000362455 UVRAGQ9P2Y5 699 aa4.28□□□□□ -1.72
RNU4-39P-201ENST00000362455 SEC14L3Q9UDX4 400 aa4.28□□□□□ -1.72
RNU4-39P-201ENST00000362455 C3orf18Q9UK00 162 aa4.28□□□□□ -1.72
RNU4-39P-201ENST00000362455 MRPS33Q9Y291 106 aaKnown RBP4.28□□□□□ -1.72
RNU4-39P-201ENST00000362455 ASF1AQ9Y294 204 aa4.28□□□□□ -1.72
RNU4-39P-201ENST00000362455 MEMO1Q9Y316 297 aa4.28□□□□□ -1.72
RNU4-39P-201ENST00000362455 FBN1P35555 2871 aaKnown RBP4.28□□□□□ -1.73
RNU4-39P-201ENST00000362455 SVILO95425 2214 aa4.27□□□□□ -1.73
RNU4-39P-201ENST00000362455 PRRC2AP48634 2157 aaKnown RBP4.27□□□□□ -1.73
RNU4-39P-201ENST00000362455 IGKV1-8A0A0C4DH67 115 aa4.27□□□□□ -1.73
RNU4-39P-201ENST00000362455 SAGE2PA6NJ88 616 aa4.27□□□□□ -1.73
RNU4-39P-201ENST00000362455 IQCF5A8MTL0 148 aa4.27□□□□□ -1.73
RNU4-39P-201ENST00000362455 IDSB3KWA1 339 aa4.27□□□□□ -1.73
RNU4-39P-201ENST00000362455 LIN7AO14910 233 aaPredicted RBP4.27□□□□□ -1.73
RNU4-39P-201ENST00000362455 TBX6O95947 436 aaPredicted RBP4.27□□□□□ -1.73
RNU4-39P-201ENST00000362455 TBXA2RP21731 343 aa4.27□□□□□ -1.73
RNU4-39P-201ENST00000362455 CD9P21926 228 aa4.27□□□□□ -1.73
RNU4-39P-201ENST00000362455 PSMB5P28074 263 aa4.27□□□□□ -1.73
RNU4-39P-201ENST00000362455 GBX2P52951 348 aaPredicted RBP4.27□□□□□ -1.73
RNU4-39P-201ENST00000362455 VSX2P58304 361 aaPredicted RBP4.27□□□□□ -1.73
RNU4-39P-201ENST00000362455 SPIBQ01892 262 aa4.27□□□□□ -1.73
RNU4-39P-201ENST00000362455 ZNF154Q13106 437 aa4.27□□□□□ -1.73
RNU4-39P-201ENST00000362455 TCTEX1D4Q5JR98 221 aa4.27□□□□□ -1.73
RNU4-39P-201ENST00000362455 TTC23Q5W5X9 447 aa4.27□□□□□ -1.73
RNU4-39P-201ENST00000362455 SPINK14Q6IE38 97 aa4.27□□□□□ -1.73
RNU4-39P-201ENST00000362455 H3F3CQ6NXT2 135 aa4.27□□□□□ -1.73
RNU4-39P-201ENST00000362455 TMEM205Q6UW68 189 aa4.27□□□□□ -1.73
RNU4-39P-201ENST00000362455 TAS2R42Q7RTR8 314 aa4.27□□□□□ -1.73
RNU4-39P-201ENST00000362455 LINC01561Q8N1V8 128 aa4.27□□□□□ -1.73
RNU4-39P-201ENST00000362455 RPRMLQ8N4K4 120 aa4.27□□□□□ -1.73
RNU4-39P-201ENST00000362455 MDS2Q8NDY4 140 aa4.27□□□□□ -1.73
RNU4-39P-201ENST00000362455 OR2T33Q8NG76 320 aa4.27□□□□□ -1.73
RNU4-39P-201ENST00000362455 OR2A1Q8NGT9 310 aa4.27□□□□□ -1.73
RNU4-39P-201ENST00000362455 AGAP11Q8TF27 550 aa4.27□□□□□ -1.73
RNU4-39P-201ENST00000362455 SIGLEC12Q96PQ1 595 aa4.27□□□□□ -1.73
RNU4-39P-201ENST00000362455 GBA3Q9H227 469 aa4.27□□□□□ -1.73
RNU4-39P-201ENST00000362455 GORASP2Q9H8Y8 452 aa4.27□□□□□ -1.73
RNU4-39P-201ENST00000362455 NLE1Q9NVX2 485 aaPredicted RBP4.27□□□□□ -1.73
RNU4-39P-201ENST00000362455 GNG12Q9UBI6 72 aa4.27□□□□□ -1.73
RNU4-39P-201ENST00000362455 RNF14Q9UBS8 474 aa4.27□□□□□ -1.73
RNU4-39P-201ENST00000362455 RSPH14Q9UHP6 348 aa4.27□□□□□ -1.73
RNU4-39P-201ENST00000362455 TFR2Q9UP52 801 aa4.27□□□□□ -1.73
RNU4-39P-201ENST00000362455 WDR45Q9Y484 360 aa4.27□□□□□ -1.73
RNU4-39P-201ENST00000362455 NBEAL1Q6ZS30 2694 aa4.27□□□□□ -1.73
RNU4-39P-201ENST00000362455 MDC1Q14676 2089 aaKnown RBP4.26□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 70.6 ms