RNA–Protein interactions for RNA: ENST00000360093.7

SCN3A-202, Transcript of sodium voltage-gated channel alpha subunit 3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCN3A, Length 9,123 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3A-202ENST00000360093 DEGS2Q6QHC5 323 aa4.41□□□□□ -1.7
SCN3A-202ENST00000360093 KDM8Q8N371 416 aa4.41□□□□□ -1.7
SCN3A-202ENST00000360093 NOXO1Q8NFA2 376 aa4.41□□□□□ -1.7
SCN3A-202ENST00000360093 OR6K3Q8NGY3 331 aa4.41□□□□□ -1.7
SCN3A-202ENST00000360093 C8orf44Q96CB5 159 aa4.41□□□□□ -1.7
SCN3A-202ENST00000360093 MED18Q9BUE0 208 aa4.41□□□□□ -1.7
SCN3A-202ENST00000360093 ZNF385DQ9H6B1 395 aa4.41□□□□□ -1.7
SCN3A-202ENST00000360093 ALG1L2C9J202 215 aa4.41□□□□□ -1.7
SCN3A-202ENST00000360093 TNFSF11O14788 317 aa4.41□□□□□ -1.7
SCN3A-202ENST00000360093 NCR1O76036 304 aa4.41□□□□□ -1.7
SCN3A-202ENST00000360093 PPP3CBP16298 524 aa4.41□□□□□ -1.7
SCN3A-202ENST00000360093 KITLGP21583 273 aa4.41□□□□□ -1.7
SCN3A-202ENST00000360093 RAE1P78406 368 aaKnown RBP4.41□□□□□ -1.7
SCN3A-202ENST00000360093 TLE4Q04727 773 aa4.41□□□□□ -1.7
SCN3A-202ENST00000360093 PLA2G7Q13093 441 aa4.41□□□□□ -1.7
SCN3A-202ENST00000360093 ACSM5Q6NUN0 579 aa4.41□□□□□ -1.7
SCN3A-202ENST00000360093 CD300LDQ6UXZ3 194 aa4.41□□□□□ -1.7
SCN3A-202ENST00000360093 PRSS42Q7Z5A4 293 aa4.41□□□□□ -1.7
SCN3A-202ENST00000360093 HSD17B8Q92506 261 aa4.41□□□□□ -1.7
SCN3A-202ENST00000360093 ZNF486Q96H40 463 aaPredicted RBP4.41□□□□□ -1.7
SCN3A-202ENST00000360093 RPP25Q9BUL9 199 aaKnown RBP4.41□□□□□ -1.7
SCN3A-202ENST00000360093 EMC6Q9BV81 110 aa4.41□□□□□ -1.7
SCN3A-202ENST00000360093 VN1R1Q9GZP7 353 aa4.41□□□□□ -1.7
SCN3A-202ENST00000360093 KCNJ16Q9NPI9 418 aa4.41□□□□□ -1.7
SCN3A-202ENST00000360093 LANCL2Q9NS86 450 aa4.41□□□□□ -1.7
SCN3A-202ENST00000360093 MTCH2Q9Y6C9 303 aa4.41□□□□□ -1.7
SCN3A-202ENST00000360093 LOC107986453A0A1B0GWG9 222 aa4.41□□□□□ -1.7
SCN3A-202ENST00000360093 NPIPB8E9PQR5 432 aa4.41□□□□□ -1.7
SCN3A-202ENST00000360093 NRASP01111 189 aa4.41□□□□□ -1.7
SCN3A-202ENST00000360093 ZNF14P17017 642 aaPredicted RBP4.41□□□□□ -1.7
SCN3A-202ENST00000360093 ELK1P19419 428 aa4.41□□□□□ -1.7
SCN3A-202ENST00000360093 CLDN15P56746 228 aa4.41□□□□□ -1.7
SCN3A-202ENST00000360093 SLC17A1Q14916 467 aa4.41□□□□□ -1.7
SCN3A-202ENST00000360093 TMEM211Q6ICI0 200 aa4.41□□□□□ -1.7
SCN3A-202ENST00000360093 ARHGEF39Q8N4T4 335 aa4.41□□□□□ -1.7
SCN3A-202ENST00000360093 PRR14Q9BWN1 585 aa4.41□□□□□ -1.7
SCN3A-202ENST00000360093 GLRX2Q9NS18 164 aa4.41□□□□□ -1.7
SCN3A-202ENST00000360093 CLEC2DQ9UHP7 191 aa4.41□□□□□ -1.7
SCN3A-202ENST00000360093 FOXJ3Q9UPW0 622 aa4.41□□□□□ -1.7
SCN3A-202ENST00000360093 SLC5A6Q9Y289 635 aa4.41□□□□□ -1.7
SCN3A-202ENST00000360093 SCN3AQ9NY46 2000 aa4.41□□□□□ -1.7
SCN3A-202ENST00000360093 TRGV5A0A0B4J1U4 118 aa4.41□□□□□ -1.7
SCN3A-202ENST00000360093 IGHV5-51A0A0C4DH38 117 aa4.41□□□□□ -1.7
SCN3A-202ENST00000360093 SSX5O60225 188 aa4.41□□□□□ -1.7
SCN3A-202ENST00000360093 TUSC2O75896 110 aa4.41□□□□□ -1.7
SCN3A-202ENST00000360093 KIR2DL1P43626 348 aaPredicted RBP4.41□□□□□ -1.7
SCN3A-202ENST00000360093 PLPP7Q8NBV4 271 aa4.41□□□□□ -1.7
SCN3A-202ENST00000360093 REEP6Q96HR9 211 aa4.41□□□□□ -1.7
SCN3A-202ENST00000360093 LOXL4Q96JB6 756 aa4.41□□□□□ -1.7
SCN3A-202ENST00000360093 ACKR4Q9NPB9 350 aa4.41□□□□□ -1.7
SCN3A-202ENST00000360093 ANKRD61A6NGH8 418 aa4.41□□□□□ -1.7
SCN3A-202ENST00000360093 SHOXO15266 292 aa4.41□□□□□ -1.7
SCN3A-202ENST00000360093 SPDEFO95238 335 aa4.41□□□□□ -1.7
SCN3A-202ENST00000360093 APOA2P02652 100 aa4.41□□□□□ -1.7
SCN3A-202ENST00000360093 TCRBP04435 133 aa4.41□□□□□ -1.7
SCN3A-202ENST00000360093 EMDP50402 254 aa4.41□□□□□ -1.7
SCN3A-202ENST00000360093 EIF4EBP2Q13542 120 aaPredicted RBP4.41□□□□□ -1.7
SCN3A-202ENST00000360093 ZNF425Q6IV72 752 aa4.41□□□□□ -1.7
SCN3A-202ENST00000360093 HEPHL1Q6MZM0 1159 aa4.41□□□□□ -1.7
SCN3A-202ENST00000360093 MTFR2Q6P444 385 aa4.41□□□□□ -1.7
SCN3A-202ENST00000360093 SSX8Q7RTT4 187 aa4.41□□□□□ -1.7
SCN3A-202ENST00000360093 ANKRD37Q7Z713 158 aa4.41□□□□□ -1.7
SCN3A-202ENST00000360093 ZNF547Q8IVP9 402 aa4.41□□□□□ -1.7
SCN3A-202ENST00000360093 LGI3Q8N145 548 aa4.41□□□□□ -1.7
SCN3A-202ENST00000360093 LINC01555Q8NAE3 123 aa4.41□□□□□ -1.7
SCN3A-202ENST00000360093 OR51D1Q8NGF3 324 aa4.41□□□□□ -1.7
SCN3A-202ENST00000360093 RBMXL1Q96E39 390 aaKnown RBP4.41□□□□□ -1.7
SCN3A-202ENST00000360093 DCLRE1CQ96SD1 692 aaKnown RBP4.41□□□□□ -1.7
SCN3A-202ENST00000360093 TNFRSF12AQ9NP84 129 aa4.41□□□□□ -1.7
SCN3A-202ENST00000360093 EMC7Q9NPA0 242 aa4.41□□□□□ -1.7
SCN3A-202ENST00000360093 A0A0B4J2E0 115 aa4.41□□□□□ -1.7
SCN3A-202ENST00000360093 A0A1B0GX12 115 aa4.41□□□□□ -1.7
SCN3A-202ENST00000360093 FXYD1O00168 92 aa4.41□□□□□ -1.7
SCN3A-202ENST00000360093 F10P00742 488 aa4.41□□□□□ -1.7
SCN3A-202ENST00000360093 SERPINA7P05543 415 aa4.41□□□□□ -1.7
SCN3A-202ENST00000360093 TRAPPC2P0DI81 140 aa4.41□□□□□ -1.7
SCN3A-202ENST00000360093 TRAPPC2BP0DI82 140 aa4.41□□□□□ -1.7
SCN3A-202ENST00000360093 ARL3P36405 182 aa4.41□□□□□ -1.7
SCN3A-202ENST00000360093 LIPAP38571 399 aa4.41□□□□□ -1.7
SCN3A-202ENST00000360093 ARF1P84077 181 aaKnown RBP4.41□□□□□ -1.7
SCN3A-202ENST00000360093 OR1C1Q15619 314 aa4.41□□□□□ -1.7
SCN3A-202ENST00000360093 TRIP6Q15654 476 aaKnown RBP4.41□□□□□ -1.7
SCN3A-202ENST00000360093 ZIC1Q15915 447 aa4.41□□□□□ -1.7
SCN3A-202ENST00000360093 ZNF141Q15928 474 aa4.41□□□□□ -1.7
SCN3A-202ENST00000360093 ELFN2Q5R3F8 820 aa4.41□□□□□ -1.7
SCN3A-202ENST00000360093 SFRP5Q5T4F7 317 aa4.41□□□□□ -1.7
SCN3A-202ENST00000360093 BRICD5Q6PL45 260 aa4.41□□□□□ -1.7
SCN3A-202ENST00000360093 SYT9Q86SS6 491 aa4.41□□□□□ -1.7
SCN3A-202ENST00000360093 SECTM1Q8WVN6 248 aa4.41□□□□□ -1.7
SCN3A-202ENST00000360093 RPL3LQ92901 407 aaKnown RBP4.41□□□□□ -1.7
SCN3A-202ENST00000360093 APOBEC3DQ96AK3 386 aaPredicted RBP4.41□□□□□ -1.7
SCN3A-202ENST00000360093 ACOXLQ9NUZ1 547 aa4.41□□□□□ -1.7
SCN3A-202ENST00000360093 P4HTMQ9NXG6 502 aa4.41□□□□□ -1.7
SCN3A-202ENST00000360093 PPP1R14DQ9NXH3 145 aa4.41□□□□□ -1.7
SCN3A-202ENST00000360093 C5orf49A4QMS7 147 aa4.4□□□□□ -1.7
SCN3A-202ENST00000360093 F8W036 122 aa4.4□□□□□ -1.7
SCN3A-202ENST00000360093 DHHO43323 396 aa4.4□□□□□ -1.7
SCN3A-202ENST00000360093 HOXB5P09067 269 aa4.4□□□□□ -1.7
SCN3A-202ENST00000360093 GSTP1P09211 210 aaKnown RBP4.4□□□□□ -1.7
SCN3A-202ENST00000360093 COL9A1P20849 921 aa4.4□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms